data_YKJ # _chem_comp.id YKJ _chem_comp.name "2-AMINO-N-[4-(3H-IMIDAZO[4,5-C]PYRIDIN-2-YL)--9H-FLUOREN-9-YL]-ISONICOTINAMIDE" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H18 N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-05-27 _chem_comp.pdbx_modified_date 2011-10-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 418.450 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YKJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2YKJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YKJ C1 C1 C 0 1 Y N N 13.152 14.495 26.276 -6.839 1.616 1.385 C1 YKJ 1 YKJ N1 N1 N 0 1 Y N N 12.926 14.672 27.652 -7.514 0.586 0.901 N1 YKJ 2 YKJ C2 C2 C 0 1 Y N N 11.603 14.736 28.144 -6.915 -0.464 0.374 C2 YKJ 3 YKJ N2 N2 N 0 1 Y N N 9.135 14.634 27.373 -4.614 -1.437 -0.158 N2 YKJ 4 YKJ C3 C3 C 0 1 Y N N 12.105 14.363 25.332 -5.474 1.648 1.365 C3 YKJ 5 YKJ N3 N3 N 0 1 Y N N 9.592 14.351 25.237 -3.481 0.263 0.640 N3 YKJ 6 YKJ C4 C4 C 0 1 Y N N 8.593 14.474 26.133 -3.370 -0.912 0.066 C4 YKJ 7 YKJ N4 N4 N 0 1 N N N 3.304 11.880 24.755 2.365 -0.449 -0.338 N4 YKJ 8 YKJ C5 C5 C 0 1 Y N N 10.785 14.432 25.835 -4.780 0.561 0.818 C5 YKJ 9 YKJ N5 N5 N 0 1 Y N N -1.404 10.612 26.159 6.819 -0.229 1.996 N5 YKJ 10 YKJ C6 C6 C 0 1 Y N N 10.507 14.612 27.258 -5.532 -0.520 0.311 C6 YKJ 11 YKJ N6 N6 N 0 1 N N N -2.542 11.630 24.405 8.278 0.793 0.470 N6 YKJ 12 YKJ C7 C7 C 0 1 Y N N 7.249 14.462 25.882 -2.095 -1.569 -0.285 C7 YKJ 13 YKJ C8 C8 C 0 1 Y N N 4.360 14.754 25.481 0.300 -2.809 -0.945 C8 YKJ 14 YKJ C9 C9 C 0 1 Y N N 5.076 15.729 26.264 -0.808 -3.572 -0.613 C9 YKJ 15 YKJ C10 C10 C 0 1 Y N N 6.500 15.572 26.445 -2.000 -2.960 -0.285 C10 YKJ 16 YKJ C11 C11 C 0 1 N N N 2.215 11.719 23.989 3.575 0.023 -0.698 C11 YKJ 17 YKJ C12 C12 C 0 1 Y N N 1.053 11.234 24.920 4.715 -0.064 0.244 C12 YKJ 18 YKJ O13 O13 O 0 1 N N N 2.178 11.914 22.759 3.731 0.521 -1.796 O13 YKJ 19 YKJ C14 C14 C 0 1 Y N N 1.064 10.531 26.170 4.556 -0.633 1.513 C14 YKJ 20 YKJ C15 C15 C 0 1 Y N N -0.193 10.233 26.769 5.641 -0.696 2.363 C15 YKJ 21 YKJ C16 C16 C 0 1 N N R 4.560 12.625 24.138 1.238 -0.363 -1.270 C16 YKJ 22 YKJ C17 C17 C 0 1 Y N N 5.083 13.637 24.911 0.221 -1.433 -0.956 C17 YKJ 23 YKJ C18 C18 C 0 1 Y N N 6.502 13.450 25.075 -0.970 -0.794 -0.628 C18 YKJ 24 YKJ C19 C19 C 0 1 Y N N 5.608 11.679 23.763 0.523 0.955 -1.102 C19 YKJ 25 YKJ C20 C20 C 0 1 Y N N 6.840 12.245 24.380 -0.787 0.674 -0.717 C20 YKJ 26 YKJ C21 C21 C 0 1 Y N N 8.090 11.509 24.170 -1.674 1.728 -0.488 C21 YKJ 27 YKJ C22 C22 C 0 1 Y N N 8.134 10.265 23.391 -1.249 3.031 -0.642 C22 YKJ 28 YKJ C23 C23 C 0 1 Y N N 6.906 9.746 22.808 0.053 3.300 -1.025 C23 YKJ 29 YKJ C24 C24 C 0 1 Y N N 5.662 10.463 23.001 0.937 2.260 -1.254 C24 YKJ 30 YKJ C25 C25 C 0 1 Y N N -0.178 11.641 24.264 5.975 0.419 -0.109 C25 YKJ 31 YKJ C26 C26 C 0 1 Y N N -1.383 11.297 24.940 7.016 0.317 0.808 C26 YKJ 32 YKJ H1 H1 H 0 1 N N N 14.172 14.458 25.922 -7.381 2.452 1.801 H1 YKJ 33 YKJ H3 H3 H 0 1 N N N 12.304 14.217 24.281 -4.938 2.497 1.765 H3 YKJ 34 YKJ H2 H2 H 0 1 N N N 11.428 14.880 29.200 -7.504 -1.283 -0.010 H2 YKJ 35 YKJ HA HA H 0 1 N N N 8.622 14.748 28.224 -4.813 -2.293 -0.569 HA YKJ 36 YKJ H4 H4 H 0 1 N N N 3.323 11.538 25.694 2.241 -0.846 0.538 H4 YKJ 37 YKJ H16 H16 H 0 1 N N N 4.165 13.120 23.239 1.591 -0.470 -2.296 H16 YKJ 38 YKJ H15 H15 H 0 1 N N N -0.218 9.705 27.711 5.524 -1.134 3.343 H15 YKJ 39 YKJ H61N H61N H 0 0 N N N -3.285 11.318 24.997 9.009 0.724 1.105 H61N YKJ 40 YKJ H62N H62N H 0 0 N N N -2.590 12.624 24.306 8.429 1.195 -0.400 H62N YKJ 41 YKJ H10 H10 H 0 1 N N N 7.032 16.312 27.024 -2.860 -3.559 -0.026 H10 YKJ 42 YKJ H8 H8 H 0 1 N N N 3.297 14.855 25.321 1.230 -3.296 -1.201 H8 YKJ 43 YKJ H9 H9 H 0 1 N N N 4.556 16.564 26.709 -0.737 -4.649 -0.607 H9 YKJ 44 YKJ H14 H14 H 0 1 N N N 1.991 10.238 26.640 3.596 -1.018 1.824 H14 YKJ 45 YKJ H25 H25 H 0 1 N N N -0.179 12.171 23.323 6.140 0.865 -1.079 H25 YKJ 46 YKJ H24 H24 H 0 1 N N N 4.755 10.074 22.562 1.954 2.472 -1.552 H24 YKJ 47 YKJ H21 H21 H 0 1 N N N 9.004 11.892 24.600 -2.691 1.523 -0.190 H21 YKJ 48 YKJ H22 H22 H 0 1 N N N 9.068 9.741 23.252 -1.936 3.845 -0.465 H22 YKJ 49 YKJ H23 H23 H 0 1 N N N 6.922 8.831 22.234 0.380 4.322 -1.144 H23 YKJ 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YKJ C1 N1 DOUB Y N 1 YKJ C1 C3 SING Y N 2 YKJ N1 C2 SING Y N 3 YKJ C2 C6 DOUB Y N 4 YKJ N2 C4 SING Y N 5 YKJ N2 C6 SING Y N 6 YKJ C3 C5 DOUB Y N 7 YKJ N3 C4 DOUB Y N 8 YKJ N3 C5 SING Y N 9 YKJ C4 C7 SING Y N 10 YKJ N4 C11 SING N N 11 YKJ N4 C16 SING N N 12 YKJ C5 C6 SING Y N 13 YKJ N5 C15 SING Y N 14 YKJ N5 C26 DOUB Y N 15 YKJ N6 C26 SING N N 16 YKJ C7 C10 SING Y N 17 YKJ C7 C18 DOUB Y N 18 YKJ C8 C9 SING Y N 19 YKJ C8 C17 DOUB Y N 20 YKJ C9 C10 DOUB Y N 21 YKJ C11 C12 SING N N 22 YKJ C11 O13 DOUB N N 23 YKJ C12 C14 SING Y N 24 YKJ C12 C25 DOUB Y N 25 YKJ C14 C15 DOUB Y N 26 YKJ C16 C17 SING N N 27 YKJ C16 C19 SING N N 28 YKJ C17 C18 SING Y N 29 YKJ C18 C20 SING Y N 30 YKJ C19 C20 SING Y N 31 YKJ C19 C24 DOUB Y N 32 YKJ C20 C21 DOUB Y N 33 YKJ C21 C22 SING Y N 34 YKJ C22 C23 DOUB Y N 35 YKJ C23 C24 SING Y N 36 YKJ C25 C26 SING Y N 37 YKJ C1 H1 SING N N 38 YKJ C3 H3 SING N N 39 YKJ C2 H2 SING N N 40 YKJ N2 HA SING N N 41 YKJ N4 H4 SING N N 42 YKJ C16 H16 SING N N 43 YKJ C15 H15 SING N N 44 YKJ N6 H61N SING N N 45 YKJ N6 H62N SING N N 46 YKJ C10 H10 SING N N 47 YKJ C8 H8 SING N N 48 YKJ C9 H9 SING N N 49 YKJ C14 H14 SING N N 50 YKJ C25 H25 SING N N 51 YKJ C24 H24 SING N N 52 YKJ C21 H21 SING N N 53 YKJ C22 H22 SING N N 54 YKJ C23 H23 SING N N 55 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YKJ SMILES ACDLabs 12.01 "O=C(c1ccnc(N)c1)NC6c2ccccc2c5c6cccc5c4nc3ccncc3n4" YKJ SMILES_CANONICAL CACTVS 3.370 "Nc1cc(ccn1)C(=O)N[C@@H]2c3ccccc3c4c2cccc4c5[nH]c6cnccc6n5" YKJ SMILES CACTVS 3.370 "Nc1cc(ccn1)C(=O)N[CH]2c3ccccc3c4c2cccc4c5[nH]c6cnccc6n5" YKJ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "c1ccc2c(c1)-c3c(cccc3[C@@H]2NC(=O)c4ccnc(c4)N)c5[nH]c6cnccc6n5" YKJ SMILES "OpenEye OEToolkits" 1.7.2 "c1ccc2c(c1)-c3c(cccc3C2NC(=O)c4ccnc(c4)N)c5[nH]c6cnccc6n5" YKJ InChI InChI 1.03 "InChI=1S/C25H18N6O/c26-21-12-14(8-11-28-21)25(32)31-23-16-5-2-1-4-15(16)22-17(23)6-3-7-18(22)24-29-19-9-10-27-13-20(19)30-24/h1-13,23H,(H2,26,28)(H,29,30)(H,31,32)/t23-/m1/s1" YKJ InChIKey InChI 1.03 MLQIPNRXDPWOES-HSZRJFAPSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YKJ "SYSTEMATIC NAME" ACDLabs 12.01 "2-amino-N-[(9R)-4-(3H-imidazo[4,5-c]pyridin-2-yl)-9H-fluoren-9-yl]pyridine-4-carboxamide" YKJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "2-azanyl-N-[(9R)-4-(3H-imidazo[4,5-c]pyridin-2-yl)-9H-fluoren-9-yl]pyridine-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YKJ "Create component" 2011-05-27 EBI YKJ "Modify aromatic_flag" 2011-06-04 RCSB YKJ "Modify descriptor" 2011-06-04 RCSB #