data_YKN
#
_chem_comp.id YKN
_chem_comp.name "2-[DIFLUORO-[(4-METHYL-PYRIMIDINYL)-THIO]METHYL]-BENZOXAZOLE"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C13 H9 F2 N3 O S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2011-05-31
_chem_comp.pdbx_modified_date 2011-08-12
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 293.292
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code YKN
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2YKN
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YKN F10 F10 F 0 1 N N N 46.879 65.999 16.258 -0.367 1.364 -1.142 F10 YKN 1
YKN C9 C9 C 0 1 N N N 46.571 64.783 15.822 -0.042 0.623 -0.001 C9 YKN 2
YKN F11 F11 F 0 1 N N N 45.249 64.840 15.904 -0.367 1.362 1.142 F11 YKN 3
YKN S12 S12 S 0 1 N N N 47.278 64.273 14.167 -0.975 -0.928 -0.002 S12 YKN 4
YKN C13 C13 C 0 1 Y N N 48.967 64.420 14.368 -2.620 -0.296 -0.001 C13 YKN 5
YKN N15 N15 N 0 1 Y N N 49.417 64.881 15.551 -3.639 -1.144 -0.001 N15 YKN 6
YKN C16 C16 C 0 1 Y N N 50.720 65.079 15.825 -4.885 -0.702 -0.000 C16 YKN 7
YKN C17 C17 C 0 1 N N N 51.044 65.586 17.221 -6.038 -1.673 -0.000 C17 YKN 8
YKN C18 C18 C 0 1 Y N N 51.669 64.790 14.825 -5.119 0.665 0.001 C18 YKN 9
YKN C19 C19 C 0 1 Y N N 51.164 64.307 13.609 -4.031 1.523 0.002 C19 YKN 10
YKN N20 N20 N 0 1 Y N N 49.842 64.121 13.395 -2.809 1.016 0.005 N20 YKN 11
YKN C8 C8 C 0 1 Y N N 46.985 63.936 16.979 1.434 0.322 -0.001 C8 YKN 12
YKN N7 N7 N 0 1 Y N N 47.387 64.431 18.168 2.375 1.217 -0.001 N7 YKN 13
YKN C6 C6 C 0 1 Y N N 47.631 63.337 18.946 3.581 0.587 -0.001 C6 YKN 14
YKN C5 C5 C 0 1 Y N N 48.099 63.153 20.245 4.904 1.032 0.000 C5 YKN 15
YKN C4 C4 C 0 1 Y N N 48.269 61.855 20.712 5.932 0.116 0.001 C4 YKN 16
YKN C3 C3 C 0 1 Y N N 47.912 60.814 19.865 5.661 -1.244 0.000 C3 YKN 17
YKN C2 C2 C 0 1 Y N N 47.437 60.976 18.599 4.359 -1.698 -0.001 C2 YKN 18
YKN C1 C1 C 0 1 Y N N 47.326 62.259 18.161 3.311 -0.790 -0.001 C1 YKN 19
YKN O14 O14 O 0 1 Y N N 46.917 62.601 16.971 1.965 -0.911 0.004 O14 YKN 20
YKN H171 H171 H 0 0 N N N 50.112 65.709 17.792 -6.316 -1.907 1.027 H171 YKN 21
YKN H172 H172 H 0 0 N N N 51.695 64.861 17.732 -6.890 -1.225 -0.513 H172 YKN 22
YKN H173 H173 H 0 0 N N N 51.560 66.555 17.148 -5.744 -2.587 -0.515 H173 YKN 23
YKN H18 H18 H 0 1 N N N 52.727 64.933 14.986 -6.127 1.052 0.002 H18 YKN 24
YKN H19 H19 H 0 1 N N N 51.857 64.075 12.814 -4.178 2.593 0.002 H19 YKN 25
YKN H5 H5 H 0 1 N N N 48.325 64.000 20.875 5.120 2.090 0.000 H5 YKN 26
YKN H4 H4 H 0 1 N N N 48.665 61.663 21.698 6.956 0.459 0.001 H4 YKN 27
YKN H3 H3 H 0 1 N N N 48.019 59.805 20.236 6.476 -1.953 -0.000 H3 YKN 28
YKN H2 H2 H 0 1 N N N 47.164 60.135 17.979 4.156 -2.759 -0.002 H2 YKN 29
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YKN F10 C9 SING N N 1
YKN C9 F11 SING N N 2
YKN C9 S12 SING N N 3
YKN C9 C8 SING N N 4
YKN S12 C13 SING N N 5
YKN C13 N15 SING Y N 6
YKN C13 N20 DOUB Y N 7
YKN N15 C16 DOUB Y N 8
YKN C16 C17 SING N N 9
YKN C16 C18 SING Y N 10
YKN C18 C19 DOUB Y N 11
YKN C19 N20 SING Y N 12
YKN C8 N7 DOUB Y N 13
YKN C8 O14 SING Y N 14
YKN N7 C6 SING Y N 15
YKN C6 C5 SING Y N 16
YKN C6 C1 DOUB Y N 17
YKN C5 C4 DOUB Y N 18
YKN C4 C3 SING Y N 19
YKN C3 C2 DOUB Y N 20
YKN C2 C1 SING Y N 21
YKN C1 O14 SING Y N 22
YKN C17 H171 SING N N 23
YKN C17 H172 SING N N 24
YKN C17 H173 SING N N 25
YKN C18 H18 SING N N 26
YKN C19 H19 SING N N 27
YKN C5 H5 SING N N 28
YKN C4 H4 SING N N 29
YKN C3 H3 SING N N 30
YKN C2 H2 SING N N 31
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YKN SMILES ACDLabs 12.01 "FC(F)(Sc1nc(ccn1)C)c2nc3ccccc3o2"
YKN SMILES_CANONICAL CACTVS 3.370 "Cc1ccnc(SC(F)(F)c2oc3ccccc3n2)n1"
YKN SMILES CACTVS 3.370 "Cc1ccnc(SC(F)(F)c2oc3ccccc3n2)n1"
YKN SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "Cc1ccnc(n1)SC(c2nc3ccccc3o2)(F)F"
YKN SMILES "OpenEye OEToolkits" 1.7.2 "Cc1ccnc(n1)SC(c2nc3ccccc3o2)(F)F"
YKN InChI InChI 1.03 "InChI=1S/C13H9F2N3OS/c1-8-6-7-16-12(17-8)20-13(14,15)11-18-9-4-2-3-5-10(9)19-11/h2-7H,1H3"
YKN InChIKey InChI 1.03 VJAIXDQDRKEAAZ-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
YKN "SYSTEMATIC NAME" ACDLabs 12.01 "2-{difluoro[(4-methylpyrimidin-2-yl)sulfanyl]methyl}-1,3-benzoxazole"
YKN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "2-[bis(fluoranyl)-(4-methylpyrimidin-2-yl)sulfanyl-methyl]-1,3-benzoxazole"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YKN "Create component" 2011-05-28 EBI
YKN "Modify aromatic_flag" 2011-06-04 RCSB
YKN "Modify descriptor" 2011-06-04 RCSB
#