data_YKW
#
_chem_comp.id YKW
_chem_comp.name "~{N}-(4-chlorophenyl)-2-(4-ethylpiperazin-1-yl)pteridin-4-amine"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C18 H20 Cl N7"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2023-12-05
_chem_comp.pdbx_modified_date 2024-11-22
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 369.851
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code YKW
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8R7C
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
_chem_comp.pdbx_pcm ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YKW C1 C1 C 0 1 N N N N N N 16.132 16.308 21.598 -3.682 -3.461 0.958 C1 YKW 1
YKW C2 C2 C 0 1 N N N N N N 14.103 16.737 22.846 -3.368 -2.797 -1.349 C2 YKW 2
YKW C3 C3 C 0 1 N N N N N N 12.698 16.235 23.174 -3.116 -1.337 -0.965 C3 YKW 3
YKW C4 C4 C 0 1 Y N N N N N 10.835 16.913 21.653 -1.405 0.185 -0.433 C4 YKW 4
YKW C5 C5 C 0 1 Y N N N N N 9.407 17.762 20.056 0.188 1.780 0.088 C5 YKW 5
YKW C6 C6 C 0 1 Y N N N N N 9.623 17.657 17.521 2.514 1.183 0.209 C6 YKW 6
YKW C7 C7 C 0 1 Y N N N N N 11.008 17.747 17.402 2.437 0.218 -0.787 C7 YKW 7
YKW C8 C8 C 0 1 Y N N N N N 11.622 17.576 16.172 3.447 -0.713 -0.925 C8 YKW 8
YKW C11 C9 C 0 1 Y N N N N N 8.860 17.403 16.383 3.609 1.207 1.064 C11 YKW 9
YKW C12 C10 C 0 1 Y N N N N N 8.766 18.534 21.081 -0.881 2.780 0.103 C12 YKW 10
YKW C15 C11 C 0 1 Y N N N N N 9.253 18.407 22.362 -2.201 2.342 -0.173 C15 YKW 11
YKW C16 C12 C 0 1 N N N N N N 12.569 15.258 20.960 -1.213 -2.017 0.368 C16 YKW 12
YKW C17 C13 C 0 1 N N N N N N 13.957 15.799 20.660 -1.465 -3.477 -0.016 C17 YKW 13
YKW CL CL1 CL 0 0 N N N N N N 11.614 17.115 13.508 5.804 -1.859 -0.248 CL YKW 14
YKW C9 C14 C 0 1 Y N N N N N 10.844 17.321 15.060 4.536 -0.687 -0.072 C9 YKW 15
YKW C10 C15 C 0 1 Y N N N N N 9.470 17.233 15.151 4.616 0.273 0.922 C10 YKW 16
YKW N3 N1 N 0 1 N N N N N N 8.964 17.829 18.766 1.496 2.131 0.348 N3 YKW 17
YKW N2 N2 N 0 1 Y N N N N N 10.430 16.956 20.356 -0.145 0.525 -0.183 N2 YKW 18
YKW N5 N3 N 0 1 Y N N N N N 8.708 19.105 23.403 -3.200 3.227 -0.169 N5 YKW 19
YKW C14 C16 C 0 1 Y N N N N N 7.704 19.910 23.101 -2.946 4.492 0.092 C14 YKW 20
YKW C13 C17 C 0 1 Y N N N N N 7.217 20.038 21.816 -1.646 4.918 0.363 C13 YKW 21
YKW N4 N4 N 0 1 Y N N N N N 7.719 19.363 20.801 -0.646 4.061 0.365 N4 YKW 22
YKW N6 N5 N 0 1 Y N N N N N 10.296 17.586 22.670 -2.405 1.044 -0.433 N6 YKW 23
YKW N1 N6 N 0 1 N N N N N N 11.889 16.096 21.956 -1.681 -1.140 -0.714 N1 YKW 24
YKW N N7 N 0 1 N N N N N N 14.762 15.845 21.885 -2.900 -3.674 -0.267 N YKW 25
YKW C C18 C 0 1 N N N N N N 17.139 15.990 22.682 -3.341 -4.551 1.977 C YKW 26
YKW H3 H1 H 0 1 N N N N N N 16.105 17.399 21.463 -3.442 -2.484 1.378 H3 YKW 27
YKW H4 H2 H 0 1 N N N N N N 16.468 15.831 20.665 -4.745 -3.505 0.723 H4 YKW 28
YKW H5 H3 H 0 1 N N N N N N 14.698 16.774 23.770 -4.435 -2.952 -1.507 H5 YKW 29
YKW H6 H4 H 0 1 N N N N N N 14.034 17.746 22.413 -2.827 -3.030 -2.266 H6 YKW 30
YKW H8 H5 H 0 1 N N N N N N 12.773 15.256 23.669 -3.436 -0.686 -1.778 H8 YKW 31
YKW H7 H6 H 0 1 N N N N N N 12.209 16.952 23.850 -3.679 -1.096 -0.063 H7 YKW 32
YKW H10 H7 H 0 1 N N N N N N 11.608 17.952 18.276 1.587 0.196 -1.453 H10 YKW 33
YKW H11 H8 H 0 1 N N N N N N 12.696 17.641 16.084 3.386 -1.464 -1.699 H11 YKW 34
YKW H13 H9 H 0 1 N N N N N N 7.785 17.338 16.462 3.672 1.956 1.840 H13 YKW 35
YKW H16 H10 H 0 1 N N N N N N 12.657 14.233 21.350 -1.754 -1.783 1.285 H16 YKW 36
YKW H17 H11 H 0 1 N N N N N N 11.977 15.247 20.033 -0.146 -1.861 0.526 H17 YKW 37
YKW H19 H12 H 0 1 N N N N N N 14.450 15.145 19.926 -0.902 -3.717 -0.918 H19 YKW 38
YKW H18 H13 H 0 1 N N N N N N 13.869 16.814 20.246 -1.145 -4.127 0.797 H18 YKW 39
YKW H12 H14 H 0 1 N N N N N N 8.876 17.034 14.271 5.467 0.292 1.586 H12 YKW 40
YKW H9 H15 H 0 1 N N N N N N 7.990 18.039 18.683 1.709 3.035 0.626 H9 YKW 41
YKW H15 H16 H 0 1 N N N N N N 7.247 20.490 23.890 -3.753 5.209 0.096 H15 YKW 42
YKW H14 H17 H 0 1 N N N N N N 6.395 20.715 21.636 -1.457 5.960 0.575 H14 YKW 43
YKW H H19 H 0 1 N N N N N N 18.128 16.369 22.387 -3.921 -4.393 2.886 H YKW 44
YKW H2 H20 H 0 1 N N N N N N 16.829 16.469 23.622 -3.580 -5.528 1.558 H2 YKW 45
YKW H1 H21 H 0 1 N N N N N N 17.192 14.901 22.825 -2.277 -4.507 2.213 H1 YKW 46
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YKW C C1 SING N N 1
YKW C1 N SING N N 2
YKW N C2 SING N N 3
YKW C2 C3 SING N N 4
YKW C3 N1 SING N N 5
YKW N1 C4 SING N N 6
YKW C4 N2 DOUB Y N 7
YKW N2 C5 SING Y N 8
YKW C5 N3 SING N N 9
YKW N3 C6 SING N N 10
YKW C6 C7 DOUB Y N 11
YKW C7 C8 SING Y N 12
YKW C8 C9 DOUB Y N 13
YKW C9 CL SING N N 14
YKW C10 C9 SING Y N 15
YKW C11 C10 DOUB Y N 16
YKW C6 C11 SING Y N 17
YKW C12 C5 DOUB Y N 18
YKW C12 N4 SING Y N 19
YKW N4 C13 DOUB Y N 20
YKW C13 C14 SING Y N 21
YKW C14 N5 DOUB Y N 22
YKW N5 C15 SING Y N 23
YKW C15 C12 SING Y N 24
YKW N6 C15 DOUB Y N 25
YKW C4 N6 SING Y N 26
YKW C16 N1 SING N N 27
YKW C17 C16 SING N N 28
YKW N C17 SING N N 29
YKW C1 H3 SING N N 30
YKW C1 H4 SING N N 31
YKW C2 H5 SING N N 32
YKW C2 H6 SING N N 33
YKW C3 H8 SING N N 34
YKW C3 H7 SING N N 35
YKW C7 H10 SING N N 36
YKW C8 H11 SING N N 37
YKW C11 H13 SING N N 38
YKW C16 H16 SING N N 39
YKW C16 H17 SING N N 40
YKW C17 H19 SING N N 41
YKW C17 H18 SING N N 42
YKW C10 H12 SING N N 43
YKW N3 H9 SING N N 44
YKW C14 H15 SING N N 45
YKW C13 H14 SING N N 46
YKW C H SING N N 47
YKW C H2 SING N N 48
YKW C H1 SING N N 49
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YKW InChI InChI 1.06 "InChI=1S/C18H20ClN7/c1-2-25-9-11-26(12-10-25)18-23-16-15(20-7-8-21-16)17(24-18)22-14-5-3-13(19)4-6-14/h3-8H,2,9-12H2,1H3,(H,21,22,23,24)"
YKW InChIKey InChI 1.06 BZUWWBFNILEVHG-UHFFFAOYSA-N
YKW SMILES_CANONICAL CACTVS 3.385 "CCN1CCN(CC1)c2nc(Nc3ccc(Cl)cc3)c4nccnc4n2"
YKW SMILES CACTVS 3.385 "CCN1CCN(CC1)c2nc(Nc3ccc(Cl)cc3)c4nccnc4n2"
YKW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCN1CCN(CC1)c2nc3c(c(n2)Nc4ccc(cc4)Cl)nccn3"
YKW SMILES "OpenEye OEToolkits" 2.0.7 "CCN1CCN(CC1)c2nc3c(c(n2)Nc4ccc(cc4)Cl)nccn3"
#
_pdbx_chem_comp_identifier.comp_id YKW
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "~{N}-(4-chlorophenyl)-2-(4-ethylpiperazin-1-yl)pteridin-4-amine"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YKW "Create component" 2023-12-05 PDBE
YKW "Initial release" 2024-11-27 RCSB
#