data_YLT # _chem_comp.id YLT _chem_comp.name "(1'S,3aS,5R,16R,17S,19E,21S,21aR)-6'-chloro-21-methoxy-16,17-dimethyl-2,3,3',3a,4',16,17,18,21,21a-decahydro-2'H,6H,8H-15lambda~6~-spiro[10,12-etheno-15lambda~6~-furo[3,2-i][1,4]oxazepino[3,4-f][1,2,7]thiadiazacyclohexadecine-7,1'-naphthalene]-13,15,15(4H,14H)-trione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C33 H41 Cl N2 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-02-09 _chem_comp.pdbx_modified_date 2023-05-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 629.206 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YLT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8G3S _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YLT C1 C1 C 0 1 N N N -11.972 -59.288 -28.783 -2.262 5.692 -1.807 C1 YLT 1 YLT C3 C2 C 0 1 N N S -12.035 -58.941 -26.392 -1.944 3.865 -0.292 C3 YLT 2 YLT C5 C3 C 0 1 N N N -13.343 -59.644 -26.059 -3.220 3.061 -0.322 C5 YLT 3 YLT C6 C4 C 0 1 N N N -14.485 -59.103 -26.418 -3.812 2.728 0.798 C6 YLT 4 YLT C7 C5 C 0 1 N N N -15.824 -59.748 -26.128 -5.081 1.917 0.793 C7 YLT 5 YLT C8 C6 C 0 1 N N S -16.875 -58.723 -25.649 -4.754 0.438 1.024 C8 YLT 6 YLT C11 C7 C 0 1 N N R -17.253 -57.738 -26.778 -5.178 -0.392 -0.184 C11 YLT 7 YLT C18 C8 C 0 1 N N N -15.541 -55.413 -25.371 -3.050 -2.831 -1.400 C18 YLT 8 YLT C21 C9 C 0 1 Y N N -15.133 -54.061 -23.320 -1.716 -3.220 0.637 C21 YLT 9 YLT C23 C10 C 0 1 Y N N -13.089 -54.352 -22.115 0.120 -1.783 1.215 C23 YLT 10 YLT C27 C11 C 0 1 N N N -8.825 -54.587 -21.880 2.726 0.720 1.722 C27 YLT 11 YLT C30 C12 C 0 1 Y N N -8.500 -55.232 -19.119 5.365 0.102 0.735 C30 YLT 12 YLT C31 C13 C 0 1 Y N N -8.262 -55.437 -17.770 6.647 -0.146 0.271 C31 YLT 13 YLT C32 C14 C 0 1 Y N N -9.322 -55.465 -16.877 6.860 -1.101 -0.704 C32 YLT 14 YLT C34 C15 C 0 1 Y N N -10.621 -55.293 -17.321 5.782 -1.799 -1.221 C34 YLT 15 YLT C35 C16 C 0 1 Y N N -10.860 -55.102 -18.657 4.510 -1.554 -0.750 C35 YLT 16 YLT C36 C17 C 0 1 Y N N -9.792 -55.061 -19.582 4.293 -0.601 0.240 C36 YLT 17 YLT C37 C18 C 0 1 N N N -10.796 -56.071 -21.579 1.962 -0.210 -0.484 C37 YLT 18 YLT C39 C19 C 0 1 N N N -10.854 -56.789 -23.948 -0.020 1.004 -1.148 C39 YLT 19 YLT C40 C20 C 0 1 N N S -11.544 -58.170 -24.011 0.099 2.509 -0.950 C40 YLT 20 YLT O2 O1 O 0 1 N N N -11.400 -59.569 -27.506 -1.686 4.403 -1.587 O2 YLT 21 YLT C10 C21 C 0 1 N N N -18.109 -59.445 -25.074 -3.258 0.287 1.290 C10 YLT 22 YLT C13 C22 C 0 1 N N N -18.239 -58.352 -27.788 -4.340 -0.030 -1.409 C13 YLT 23 YLT S14 S1 S 0 1 N N N -17.949 -56.203 -26.092 -5.040 -2.161 0.165 S14 YLT 24 YLT O15 O2 O 0 1 N N N -19.078 -56.434 -25.291 -6.342 -2.749 0.217 O15 YLT 25 YLT O16 O3 O 0 1 N N N -18.019 -55.218 -27.092 -4.107 -2.426 1.198 O16 YLT 26 YLT N17 N1 N 0 1 N N N -16.824 -55.686 -25.013 -4.363 -2.813 -1.204 N17 YLT 27 YLT O19 O4 O 0 1 N N N -15.094 -55.548 -26.496 -2.696 -3.248 -2.504 O19 YLT 28 YLT C20 C23 C 0 1 Y N N -14.688 -55.004 -24.261 -1.967 -2.439 -0.512 C20 YLT 29 YLT C22 C24 C 0 1 Y N N -14.326 -53.750 -22.265 -0.677 -2.888 1.475 C22 YLT 30 YLT O24 O5 O 0 1 N N N -12.375 -53.949 -21.043 1.172 -1.503 2.031 O24 YLT 31 YLT C25 C25 C 0 1 N N N -11.006 -53.590 -21.183 2.460 -1.718 1.434 C25 YLT 32 YLT C26 C26 C 0 1 N N S -10.102 -54.833 -21.050 2.876 -0.414 0.722 C26 YLT 33 YLT C28 C27 C 0 1 N N N -7.681 -55.521 -21.463 3.794 1.795 1.564 C28 YLT 34 YLT C29 C28 C 0 1 N N N -7.295 -55.203 -20.027 5.173 1.169 1.784 C29 YLT 35 YLT CL33 CL1 CL 0 0 N N N -8.991 -55.730 -15.210 8.467 -1.421 -1.277 CL33 YLT 36 YLT N38 N2 N 0 1 N N N -11.430 -55.969 -22.872 0.612 0.215 -0.078 N38 YLT 37 YLT C42 C29 C 0 1 N N N -11.161 -59.084 -22.829 1.530 2.932 -0.571 C42 YLT 38 YLT C43 C30 C 0 1 N N N -11.199 -60.472 -23.453 1.324 3.976 0.540 C43 YLT 39 YLT O44 O6 O 0 1 N N N -10.808 -60.296 -24.804 0.028 3.757 1.094 O44 YLT 40 YLT C45 C31 C 0 1 N N R -11.048 -58.957 -25.226 -0.789 2.998 0.197 C45 YLT 41 YLT C47 C32 C 0 1 Y N N -12.625 -55.304 -23.050 -0.156 -0.958 0.123 C47 YLT 42 YLT C48 C33 C 0 1 Y N N -13.472 -55.611 -24.098 -1.143 -1.342 -0.763 C48 YLT 43 YLT H1 H1 H 0 1 N N N -11.408 -59.820 -29.563 -2.019 6.031 -2.814 H1 YLT 44 YLT H2 H2 H 0 1 N N N -13.020 -59.622 -28.797 -3.344 5.629 -1.695 H2 YLT 45 YLT H3 H3 H 0 1 N N N -11.929 -58.205 -28.973 -1.861 6.398 -1.079 H3 YLT 46 YLT H4 H4 H 0 1 N N N -12.259 -57.893 -26.639 -2.081 4.701 0.409 H4 YLT 47 YLT H5 H5 H 0 1 N N N -13.332 -60.585 -25.529 -3.645 2.769 -1.272 H5 YLT 48 YLT H6 H6 H 0 1 N N N -14.468 -58.159 -26.942 -3.387 3.053 1.739 H6 YLT 49 YLT H7 H7 H 0 1 N N N -16.192 -60.229 -27.046 -5.728 2.263 1.605 H7 YLT 50 YLT H8 H8 H 0 1 N N N -15.688 -60.508 -25.345 -5.606 2.045 -0.149 H8 YLT 51 YLT H9 H9 H 0 1 N N N -16.422 -58.138 -24.835 -5.308 0.090 1.902 H9 YLT 52 YLT H10 H10 H 0 1 N N N -16.337 -57.441 -27.310 -6.230 -0.161 -0.407 H10 YLT 53 YLT H11 H11 H 0 1 N N N -16.099 -53.590 -23.430 -2.334 -4.080 0.848 H11 YLT 54 YLT H12 H12 H 0 1 N N N -8.503 -53.545 -21.737 1.740 1.176 1.607 H12 YLT 55 YLT H13 H13 H 0 1 N N N -9.053 -54.757 -22.942 2.793 0.307 2.735 H13 YLT 56 YLT H14 H14 H 0 1 N N N -7.252 -55.575 -17.414 7.481 0.411 0.672 H14 YLT 57 YLT H15 H15 H 0 1 N N N -11.442 -55.309 -16.619 5.938 -2.539 -1.993 H15 YLT 58 YLT H16 H16 H 0 1 N N N -11.875 -54.982 -19.007 3.674 -2.106 -1.155 H16 YLT 59 YLT H17 H17 H 0 1 N N N -11.571 -56.352 -20.851 2.382 0.544 -1.141 H17 YLT 60 YLT H18 H18 H 0 1 N N N -10.044 -56.871 -21.641 1.862 -1.151 -1.026 H18 YLT 61 YLT H19 H19 H 0 1 N N N -9.780 -56.930 -23.759 -1.088 0.773 -1.161 H19 YLT 62 YLT H20 H20 H 0 1 N N N -10.992 -56.272 -24.909 0.425 0.727 -2.099 H20 YLT 63 YLT H21 H21 H 0 1 N N N -12.636 -58.046 -24.056 -0.172 3.005 -1.891 H21 YLT 64 YLT H22 H22 H 0 1 N N N -17.793 -60.133 -24.276 -2.986 0.864 2.174 H22 YLT 65 YLT H23 H23 H 0 1 N N N -18.809 -58.703 -24.662 -3.023 -0.764 1.455 H23 YLT 66 YLT H24 H24 H 0 1 N N N -18.606 -60.014 -25.873 -2.697 0.654 0.431 H24 YLT 67 YLT H25 H25 H 0 1 N N N -17.813 -59.279 -28.199 -4.695 -0.593 -2.272 H25 YLT 68 YLT H26 H26 H 0 1 N N N -19.189 -58.578 -27.282 -4.431 1.038 -1.609 H26 YLT 69 YLT H27 H27 H 0 1 N N N -18.419 -57.638 -28.605 -3.295 -0.276 -1.220 H27 YLT 70 YLT H28 H28 H 0 1 N N N -17.093 -55.568 -24.057 -4.954 -3.203 -1.883 H28 YLT 71 YLT H29 H29 H 0 1 N N N -14.657 -53.024 -21.537 -0.481 -3.496 2.348 H29 YLT 72 YLT H30 H30 H 0 1 N N N -10.741 -52.865 -20.400 3.188 -1.964 2.204 H30 YLT 73 YLT H31 H31 H 0 1 N N N -10.851 -53.135 -22.172 2.397 -2.530 0.710 H31 YLT 74 YLT H32 H32 H 0 1 N N N -8.012 -56.568 -21.535 3.751 2.222 0.563 H32 YLT 75 YLT H33 H33 H 0 1 N N N -6.815 -55.364 -22.123 3.634 2.582 2.301 H33 YLT 76 YLT H34 H34 H 0 1 N N N -6.565 -55.948 -19.678 5.221 0.726 2.774 H34 YLT 77 YLT H35 H35 H 0 1 N N N -6.842 -54.201 -19.991 5.940 1.931 1.675 H35 YLT 78 YLT H36 H36 H 0 1 N N N -10.155 -58.846 -22.453 2.093 2.084 -0.189 H36 YLT 79 YLT H37 H37 H 0 1 N N N -11.889 -58.998 -22.009 2.040 3.377 -1.425 H37 YLT 80 YLT H38 H38 H 0 1 N N N -12.215 -60.889 -23.399 2.082 3.844 1.311 H38 YLT 81 YLT H39 H39 H 0 1 N N N -10.499 -61.144 -22.936 1.387 4.981 0.128 H39 YLT 82 YLT H40 H40 H 0 1 N N N -10.106 -58.504 -25.567 -1.188 2.132 0.737 H40 YLT 83 YLT H41 H41 H 0 1 N N N -13.163 -56.357 -24.815 -1.272 -0.815 -1.700 H41 YLT 84 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YLT C1 O2 SING N N 1 YLT C13 C11 SING N N 2 YLT O2 C3 SING N N 3 YLT O16 S14 DOUB N N 4 YLT C11 S14 SING N N 5 YLT C11 C8 SING N N 6 YLT O19 C18 DOUB N N 7 YLT C6 C7 SING N N 8 YLT C6 C5 DOUB N E 9 YLT C3 C5 SING N N 10 YLT C3 C45 SING N N 11 YLT C7 C8 SING N N 12 YLT S14 O15 DOUB N N 13 YLT S14 N17 SING N N 14 YLT C8 C10 SING N N 15 YLT C18 N17 SING N N 16 YLT C18 C20 SING N N 17 YLT C45 O44 SING N N 18 YLT C45 C40 SING N N 19 YLT O44 C43 SING N N 20 YLT C20 C48 DOUB Y N 21 YLT C20 C21 SING Y N 22 YLT C48 C47 SING Y N 23 YLT C40 C39 SING N N 24 YLT C40 C42 SING N N 25 YLT C39 N38 SING N N 26 YLT C43 C42 SING N N 27 YLT C21 C22 DOUB Y N 28 YLT C47 N38 SING N N 29 YLT C47 C23 DOUB Y N 30 YLT N38 C37 SING N N 31 YLT C22 C23 SING Y N 32 YLT C23 O24 SING N N 33 YLT C27 C28 SING N N 34 YLT C27 C26 SING N N 35 YLT C37 C26 SING N N 36 YLT C28 C29 SING N N 37 YLT C25 C26 SING N N 38 YLT C25 O24 SING N N 39 YLT C26 C36 SING N N 40 YLT C29 C30 SING N N 41 YLT C36 C30 DOUB Y N 42 YLT C36 C35 SING Y N 43 YLT C30 C31 SING Y N 44 YLT C35 C34 DOUB Y N 45 YLT C31 C32 DOUB Y N 46 YLT C34 C32 SING Y N 47 YLT C32 CL33 SING N N 48 YLT C1 H1 SING N N 49 YLT C1 H2 SING N N 50 YLT C1 H3 SING N N 51 YLT C3 H4 SING N N 52 YLT C5 H5 SING N N 53 YLT C6 H6 SING N N 54 YLT C7 H7 SING N N 55 YLT C7 H8 SING N N 56 YLT C8 H9 SING N N 57 YLT C11 H10 SING N N 58 YLT C21 H11 SING N N 59 YLT C27 H12 SING N N 60 YLT C27 H13 SING N N 61 YLT C31 H14 SING N N 62 YLT C34 H15 SING N N 63 YLT C35 H16 SING N N 64 YLT C37 H17 SING N N 65 YLT C37 H18 SING N N 66 YLT C39 H19 SING N N 67 YLT C39 H20 SING N N 68 YLT C40 H21 SING N N 69 YLT C10 H22 SING N N 70 YLT C10 H23 SING N N 71 YLT C10 H24 SING N N 72 YLT C13 H25 SING N N 73 YLT C13 H26 SING N N 74 YLT C13 H27 SING N N 75 YLT N17 H28 SING N N 76 YLT C22 H29 SING N N 77 YLT C25 H30 SING N N 78 YLT C25 H31 SING N N 79 YLT C28 H32 SING N N 80 YLT C28 H33 SING N N 81 YLT C29 H34 SING N N 82 YLT C29 H35 SING N N 83 YLT C42 H36 SING N N 84 YLT C42 H37 SING N N 85 YLT C43 H38 SING N N 86 YLT C43 H39 SING N N 87 YLT C45 H40 SING N N 88 YLT C48 H41 SING N N 89 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YLT SMILES ACDLabs 12.01 "Clc1cc2CCCC3(CN4CC5CCOC5C(OC)C=CCC(C)C(C)S(=O)(=O)NC(=O)c5cc4c(cc5)OC3)c2cc1" YLT InChI InChI 1.06 "InChI=1S/C33H41ClN2O6S/c1-21-6-4-8-30(40-3)31-25(13-15-41-31)18-36-19-33(14-5-7-23-16-26(34)10-11-27(23)33)20-42-29-12-9-24(17-28(29)36)32(37)35-43(38,39)22(21)2/h4,8-12,16-17,21-22,25,30-31H,5-7,13-15,18-20H2,1-3H3,(H,35,37)/b8-4+/t21-,22+,25-,30-,31+,33-/m0/s1" YLT InChIKey InChI 1.06 LLLAMCJZBPYZRV-WFEBTMLYSA-N YLT SMILES_CANONICAL CACTVS 3.385 "CO[C@H]1/C=C/C[C@H](C)[C@@H](C)[S](=O)(=O)NC(=O)c2ccc3OC[C@]4(CCCc5cc(Cl)ccc45)CN(C[C@@H]6CCO[C@@H]16)c3c2" YLT SMILES CACTVS 3.385 "CO[CH]1C=CC[CH](C)[CH](C)[S](=O)(=O)NC(=O)c2ccc3OC[C]4(CCCc5cc(Cl)ccc45)CN(C[CH]6CCO[CH]16)c3c2" YLT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1C/C=C/[C@@H]([C@H]2[C@@H](CCO2)CN3C[C@@]4(CCCc5c4ccc(c5)Cl)COc6c3cc(cc6)C(=O)NS(=O)(=O)[C@@H]1C)OC" YLT SMILES "OpenEye OEToolkits" 2.0.7 "CC1CC=CC(C2C(CCO2)CN3CC4(CCCc5c4ccc(c5)Cl)COc6c3cc(cc6)C(=O)NS(=O)(=O)C1C)OC" # _pdbx_chem_comp_identifier.comp_id YLT _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "(1'S,3aS,5R,16R,17S,19E,21S,21aR)-6'-chloro-21-methoxy-16,17-dimethyl-2,3,3',3a,4',16,17,18,21,21a-decahydro-2'H,6H,8H-15lambda~6~-spiro[10,12-etheno-15lambda~6~-furo[3,2-i][1,4]oxazepino[3,4-f][1,2,7]thiadiazacyclohexadecine-7,1'-naphthalene]-13,15,15(4H,14H)-trione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YLT "Create component" 2023-02-09 RCSB YLT "Initial release" 2023-05-17 RCSB #