data_YMN # _chem_comp.id YMN _chem_comp.name "1-[(3-iodanylphenyl)methyl]guanidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H10 I N3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-12-06 _chem_comp.pdbx_modified_date 2024-06-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 275.090 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YMN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8XB3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YMN C14 C1 C 0 1 Y N N N N N 113.066 122.199 121.317 1.440 -0.937 0.417 C14 YMN 1 YMN C16 C2 C 0 1 N N N N N N 112.299 121.040 120.795 2.767 -0.373 0.855 C16 YMN 2 YMN C22 C3 C 0 1 Y N N N N N 113.466 124.474 121.450 -0.901 -0.648 0.006 C22 YMN 3 YMN C24 C4 C 0 1 Y N N N N N 114.759 122.991 122.722 0.131 -2.773 -0.387 C24 YMN 4 YMN C26 C5 C 0 1 Y N N N N N 114.464 124.257 122.339 -0.993 -1.968 -0.397 C26 YMN 5 YMN C28 C6 C 0 1 N N N N N N 112.662 118.921 120.414 4.705 0.762 -0.149 C28 YMN 6 YMN C18 C7 C 0 1 Y N N N N N 112.754 123.450 120.928 0.316 -0.133 0.413 C18 YMN 7 YMN C20 C8 C 0 1 Y N N N N N 114.053 121.954 122.204 1.348 -2.256 0.014 C20 YMN 8 YMN I01 I1 I 0 1 N N N N N N 113.065 126.444 120.916 -2.604 0.572 -0.008 I01 YMN 9 YMN N08 N1 N 0 1 N N N N N N 113.239 119.996 120.518 3.466 0.188 -0.305 N08 YMN 10 YMN N10 N2 N 0 1 N N N N N N 113.372 117.722 120.109 5.259 0.807 1.030 N10 YMN 11 YMN N11 N3 N 0 1 N N N N N N 111.223 118.873 120.589 5.360 1.288 -1.237 N11 YMN 12 YMN H1 H1 H 0 1 N N N N N N 111.769 121.324 119.874 2.604 0.410 1.594 H1 YMN 13 YMN H2 H2 H 0 1 N N N N N N 111.571 120.701 121.547 3.372 -1.167 1.294 H2 YMN 14 YMN H3 H3 H 0 1 N N N N N N 115.550 122.809 123.434 0.059 -3.804 -0.702 H3 YMN 15 YMN H4 H4 H 0 1 N N N N N N 115.023 125.089 122.741 -1.944 -2.371 -0.715 H4 YMN 16 YMN H5 H5 H 0 1 N N N N N N 111.959 123.630 120.220 0.388 0.898 0.728 H5 YMN 17 YMN H6 H6 H 0 1 N N N N N N 114.279 120.940 122.500 2.227 -2.883 0.013 H6 YMN 18 YMN H7 H7 H 0 1 N N N N N N 114.226 120.126 120.423 3.054 0.154 -1.182 H7 YMN 19 YMN H8 H8 H 0 1 N N N N N N 112.763 116.932 120.045 6.134 1.212 1.140 H8 YMN 20 YMN H9 H9 H 0 1 N N N N N N 110.716 119.711 120.792 4.948 1.255 -2.114 H9 YMN 21 YMN H10 H10 H 0 1 N N N N N N 110.738 118.002 120.507 6.235 1.693 -1.127 H10 YMN 22 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YMN N10 C28 DOUB N N 1 YMN C28 N08 SING N N 2 YMN C28 N11 SING N N 3 YMN N08 C16 SING N N 4 YMN C16 C14 SING N N 5 YMN I01 C22 SING N N 6 YMN C18 C14 DOUB Y N 7 YMN C18 C22 SING Y N 8 YMN C14 C20 SING Y N 9 YMN C22 C26 DOUB Y N 10 YMN C20 C24 DOUB Y N 11 YMN C26 C24 SING Y N 12 YMN C16 H1 SING N N 13 YMN C16 H2 SING N N 14 YMN C24 H3 SING N N 15 YMN C26 H4 SING N N 16 YMN C18 H5 SING N N 17 YMN C20 H6 SING N N 18 YMN N08 H7 SING N N 19 YMN N10 H8 SING N N 20 YMN N11 H9 SING N N 21 YMN N11 H10 SING N N 22 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YMN InChI InChI 1.06 "InChI=1S/C8H10IN3/c9-7-3-1-2-6(4-7)5-12-8(10)11/h1-4H,5H2,(H4,10,11,12)" YMN InChIKey InChI 1.06 PDWUPXJEEYOOTR-UHFFFAOYSA-N YMN SMILES_CANONICAL CACTVS 3.385 "NC(=N)NCc1cccc(I)c1" YMN SMILES CACTVS 3.385 "NC(=N)NCc1cccc(I)c1" YMN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(/N)\NCc1cccc(c1)I" YMN SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)I)CNC(=N)N" # _pdbx_chem_comp_identifier.comp_id YMN _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[(3-iodanylphenyl)methyl]guanidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YMN "Create component" 2023-12-06 PDBJ YMN "Initial release" 2024-06-26 RCSB #