data_YMR # _chem_comp.id YMR _chem_comp.name 2-methylcyclohexa-2,5-diene-1,4-dione _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-12-06 _chem_comp.pdbx_modified_date 2024-08-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 122.121 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YMR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8R7I _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YMR C01 C1 C 0 1 N N N N N N 53.110 46.179 42.570 1.889 1.785 0.001 C01 YMR 1 YMR C02 C2 C 0 1 N N N N N N 51.836 46.360 41.748 0.773 0.772 0.002 C02 YMR 2 YMR C03 C3 C 0 1 N N N N N N 51.411 47.755 41.294 -0.503 1.181 0.000 C03 YMR 3 YMR C04 C4 C 0 1 N N N N N N 50.137 47.935 40.473 -1.597 0.189 -0.000 C04 YMR 4 YMR O05 O1 O 0 1 N N N N N N 49.807 49.018 40.121 -2.753 0.559 -0.001 O05 YMR 5 YMR C06 C5 C 0 1 N N N N N N 49.287 46.721 40.105 -1.284 -1.255 0.001 C06 YMR 6 YMR C07 C6 C 0 1 N N N N N N 49.711 45.326 40.559 -0.008 -1.664 0.002 C07 YMR 7 YMR C08 C7 C 0 1 N N N N N N 50.986 45.146 41.380 1.086 -0.671 -0.003 C08 YMR 8 YMR O09 O2 O 0 1 N N N N N N 51.315 44.063 41.732 2.242 -1.042 -0.002 O09 YMR 9 YMR H1 H1 H 0 1 N N N N N N 53.250 45.113 42.801 2.157 2.031 1.029 H1 YMR 10 YMR H2 H2 H 0 1 N N N N N N 53.973 46.545 41.994 2.756 1.370 -0.512 H2 YMR 11 YMR H3 H3 H 0 1 N N N N N N 53.026 46.749 43.507 1.560 2.688 -0.514 H3 YMR 12 YMR H4 H4 H 0 1 N N N N N N 52.012 48.614 41.554 -0.732 2.237 -0.001 H4 YMR 13 YMR H5 H5 H 0 1 N N N N N N 48.386 46.849 39.524 -2.084 -1.981 0.001 H5 YMR 14 YMR H6 H6 H 0 1 N N N N N N 49.110 44.467 40.300 0.221 -2.719 0.003 H6 YMR 15 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YMR C06 C04 SING N N 1 YMR C06 C07 DOUB N N 2 YMR O05 C04 DOUB N N 3 YMR C04 C03 SING N N 4 YMR C07 C08 SING N N 5 YMR C03 C02 DOUB N N 6 YMR C08 O09 DOUB N N 7 YMR C08 C02 SING N N 8 YMR C02 C01 SING N N 9 YMR C01 H1 SING N N 10 YMR C01 H2 SING N N 11 YMR C01 H3 SING N N 12 YMR C03 H4 SING N N 13 YMR C06 H5 SING N N 14 YMR C07 H6 SING N N 15 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YMR InChI InChI 1.06 "InChI=1S/C7H6O2/c1-5-4-6(8)2-3-7(5)9/h2-4H,1H3" YMR InChIKey InChI 1.06 VTWDKFNVVLAELH-UHFFFAOYSA-N YMR SMILES_CANONICAL CACTVS 3.385 "CC1=CC(=O)C=CC1=O" YMR SMILES CACTVS 3.385 "CC1=CC(=O)C=CC1=O" YMR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=CC(=O)C=CC1=O" YMR SMILES "OpenEye OEToolkits" 2.0.7 "CC1=CC(=O)C=CC1=O" # _pdbx_chem_comp_identifier.comp_id YMR _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier 2-methylcyclohexa-2,5-diene-1,4-dione # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YMR "Create component" 2023-12-06 PDBE YMR "Initial release" 2024-08-28 RCSB #