data_YN3 # _chem_comp.id YN3 _chem_comp.name "~{N}-[(1~{S})-2-(dimethylamino)-1-phenyl-ethyl]-6,6-dimethyl-3-[[4-(propanoylamino)phenyl]carbonylamino]-1,4-dihydropyrrolo[3,4-c]pyrazole-5-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H35 N7 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-12-06 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 517.623 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YN3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8R9O _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YN3 C1 C1 C 0 1 N N N N N N 61.028 -5.209 72.430 -8.083 0.558 -0.910 C1 YN3 1 YN3 C5 C2 C 0 1 N N N N N N 61.088 -6.986 74.161 -5.762 0.959 -1.473 C5 YN3 2 YN3 C6 C3 C 0 1 N N S N N N 59.938 -7.948 73.893 -5.213 0.857 -0.049 C6 YN3 3 YN3 C12 C4 C 0 1 N N N N N N 61.197 -10.675 70.738 -1.314 -1.099 0.076 C12 YN3 4 YN3 C13 C5 C 0 1 Y N N N N N 61.083 -11.478 69.474 -0.269 -2.182 0.166 C13 YN3 5 YN3 C14 C6 C 0 1 Y N N N N N 61.881 -12.198 68.591 1.120 -2.397 0.221 C14 YN3 6 YN3 C16 C7 C 0 1 N N N N N N 64.044 -12.245 69.745 3.410 -1.746 0.260 C16 YN3 7 YN3 O17 O1 O 0 1 N N N N N N 63.578 -12.015 70.861 3.728 -2.918 0.331 O17 YN3 8 YN3 C19 C8 C 0 1 Y N N N N N 66.097 -12.967 68.427 5.801 -1.054 0.299 C19 YN3 9 YN3 C21 C9 C 0 1 Y N N N N N 68.291 -12.520 69.283 6.404 1.265 0.208 C21 YN3 10 YN3 C23 C10 C 0 1 N N N N N N 70.488 -12.186 68.161 8.575 2.019 -0.392 C23 YN3 11 YN3 C25 C11 C 0 1 N N N N N N 71.955 -12.500 68.332 9.677 3.043 -0.303 C25 YN3 12 YN3 C26 C12 C 0 1 N N N N N N 72.644 -12.891 67.048 10.909 2.533 -1.053 C26 YN3 13 YN3 C27 C13 C 0 1 Y N N N N N 67.725 -11.917 70.396 5.060 1.621 0.147 C27 YN3 14 YN3 C28 C14 C 0 1 Y N N N N N 66.356 -11.839 70.524 4.088 0.647 0.156 C28 YN3 15 YN3 C35 C15 C 0 1 N N N N N N 57.907 -11.743 70.587 -3.016 -3.764 1.418 C35 YN3 16 YN3 C36 C16 C 0 1 Y N N N N N 59.461 -8.563 75.196 -5.064 2.239 0.533 C36 YN3 17 YN3 C37 C17 C 0 1 Y N N N N N 59.855 -9.837 75.575 -6.024 2.733 1.396 C37 YN3 18 YN3 C38 C18 C 0 1 Y N N N N N 59.417 -10.386 76.758 -5.888 4.001 1.930 C38 YN3 19 YN3 C39 C19 C 0 1 Y N N N N N 58.574 -9.666 77.582 -4.791 4.775 1.600 C39 YN3 20 YN3 C40 C20 C 0 1 Y N N N N N 58.172 -8.394 77.217 -3.831 4.281 0.737 C40 YN3 21 YN3 O24 O2 O 0 1 N N N N N N 70.071 -11.605 67.163 8.757 0.983 -0.996 O24 YN3 22 YN3 N22 N1 N 0 1 N N N N N N 69.698 -12.584 69.182 7.387 2.255 0.199 N22 YN3 23 YN3 C18 C21 C 0 1 Y N N N N N 65.526 -12.363 69.543 4.451 -0.700 0.238 C18 YN3 24 YN3 C20 C22 C 0 1 Y N N N N N 67.467 -13.044 68.300 6.769 -0.075 0.284 C20 YN3 25 YN3 N15 N2 N 0 1 N N N N N N 63.254 -12.412 68.647 2.108 -1.403 0.201 N15 YN3 26 YN3 N29 N3 N 0 1 Y N N N N N 61.116 -12.701 67.606 1.329 -3.689 0.296 N29 YN3 27 YN3 N30 N4 N 0 1 Y N N N N N 59.853 -12.291 67.882 0.086 -4.333 0.291 N30 YN3 28 YN3 C32 C23 C 0 1 Y N N N N N 59.812 -11.542 69.020 -0.876 -3.386 0.211 C32 YN3 29 YN3 N11 N5 N 0 1 N N N N N N 59.812 -10.224 70.945 -2.627 -1.753 0.069 N11 YN3 30 YN3 C9 C24 C 0 1 N N N N N N 59.379 -9.391 71.985 -3.830 -1.149 -0.002 C9 YN3 31 YN3 O10 O3 O 0 1 N N N N N N 58.192 -9.089 72.095 -4.847 -1.816 0.001 O10 YN3 32 YN3 N8 N6 N 0 1 N N N N N N 60.314 -8.924 72.876 -3.907 0.195 -0.075 N8 YN3 33 YN3 N2 N7 N 0 1 N N N N N N 60.722 -5.561 73.847 -7.115 1.530 -1.437 N2 YN3 34 YN3 C4 C25 C 0 1 N N N N N N 61.319 -4.567 74.786 -7.521 2.009 -2.765 C4 YN3 35 YN3 C41 C26 C 0 1 Y N N N N N 58.613 -7.850 76.033 -3.965 3.011 0.207 C41 YN3 36 YN3 C33 C27 C 0 1 N N N N N N 58.889 -10.779 69.935 -2.370 -3.195 0.153 C33 YN3 37 YN3 C34 C28 C 0 1 N N N N N N 58.202 -9.666 69.153 -2.937 -3.899 -1.081 C34 YN3 38 YN3 H42 H1 H 0 1 N N N N N N 60.746 -4.162 72.243 -7.756 0.216 0.072 H42 YN3 39 YN3 H43 H2 H 0 1 N N N N N N 62.105 -5.338 72.245 -9.061 1.030 -0.823 H43 YN3 40 YN3 H44 H3 H 0 1 N N N N N N 60.459 -5.868 71.758 -8.149 -0.293 -1.588 H44 YN3 41 YN3 H49 H4 H 0 1 N N N N N N 61.946 -7.277 73.537 -5.113 1.602 -2.068 H49 YN3 42 YN3 H48 H5 H 0 1 N N N N N N 61.367 -7.054 75.223 -5.799 -0.034 -1.921 H48 YN3 43 YN3 H7 H6 H 0 1 N N N N N N 59.105 -7.351 73.494 -5.902 0.276 0.565 H7 YN3 44 YN3 H51 H7 H 0 1 N N N N N N 61.543 -11.297 71.576 -1.235 -0.436 0.937 H51 YN3 45 YN3 H52 H8 H 0 1 N N N N N N 61.879 -9.822 70.608 -1.179 -0.528 -0.843 H52 YN3 46 YN3 H54 H9 H 0 1 N N N N N N 65.463 -13.378 67.656 6.085 -2.094 0.363 H54 YN3 47 YN3 H57 H10 H 0 1 N N N N N N 72.051 -13.332 69.045 9.341 3.978 -0.750 H57 YN3 48 YN3 H73 H11 H 0 1 N N N N N N 72.456 -11.609 68.738 9.932 3.212 0.743 H73 YN3 49 YN3 H58 H12 H 0 1 N N N N N N 73.704 -13.104 67.250 11.706 3.273 -0.989 H58 YN3 50 YN3 H59 H13 H 0 1 N N N N N N 72.163 -13.789 66.632 11.245 1.597 -0.606 H59 YN3 51 YN3 H1 H14 H 0 1 N N N N N N 72.567 -12.066 66.325 10.653 2.364 -2.099 H1 YN3 52 YN3 H60 H15 H 0 1 N N N N N N 68.361 -11.506 71.166 4.780 2.663 0.092 H60 YN3 53 YN3 H61 H16 H 0 1 N N N N N N 65.925 -11.366 71.394 3.045 0.924 0.108 H61 YN3 54 YN3 H66 H17 H 0 1 N N N N N N 57.234 -11.186 71.255 -2.602 -3.265 2.294 H66 YN3 55 YN3 H67 H18 H 0 1 N N N N N N 57.316 -12.247 69.808 -4.093 -3.600 1.382 H67 YN3 56 YN3 H65 H19 H 0 1 N N N N N N 58.462 -12.493 71.169 -2.814 -4.834 1.479 H65 YN3 57 YN3 H68 H20 H 0 1 N N N N N N 60.513 -10.405 74.934 -6.881 2.128 1.654 H68 YN3 58 YN3 H69 H21 H 0 1 N N N N N N 59.732 -11.379 77.042 -6.638 4.387 2.604 H69 YN3 59 YN3 H70 H22 H 0 1 N N N N N N 58.229 -10.096 78.511 -4.685 5.766 2.016 H70 YN3 60 YN3 H71 H23 H 0 1 N N N N N N 57.513 -7.829 77.860 -2.974 4.886 0.479 H71 YN3 61 YN3 H56 H24 H 0 1 N N N N N N 70.172 -12.976 69.970 7.215 3.112 0.619 H56 YN3 62 YN3 H55 H25 H 0 1 N N N N N N 67.900 -13.515 67.430 7.813 -0.348 0.331 H55 YN3 63 YN3 H53 H26 H 0 1 N N N N N N 63.702 -12.716 67.806 1.855 -0.469 0.144 H53 YN3 64 YN3 H31 H27 H 0 1 N N N N N N 59.054 -12.510 67.322 -0.060 -5.291 0.337 H31 YN3 65 YN3 H50 H28 H 0 1 N N N N N N 61.257 -9.254 72.827 -3.096 0.723 -0.146 H50 YN3 66 YN3 H45 H30 H 0 1 N N N N N N 61.079 -4.850 75.822 -8.526 2.427 -2.709 H45 YN3 67 YN3 H46 H31 H 0 1 N N N N N N 62.411 -4.549 74.655 -6.826 2.779 -3.101 H46 YN3 68 YN3 H47 H32 H 0 1 N N N N N N 60.908 -3.569 74.574 -7.511 1.178 -3.470 H47 YN3 69 YN3 H72 H33 H 0 1 N N N N N N 58.296 -6.857 75.751 -3.213 2.624 -0.464 H72 YN3 70 YN3 H64 H34 H 0 1 N N N N N N 57.528 -9.109 69.821 -2.735 -4.968 -1.015 H64 YN3 71 YN3 H62 H35 H 0 1 N N N N N N 58.961 -8.982 68.745 -4.013 -3.735 -1.131 H62 YN3 72 YN3 H63 H36 H 0 1 N N N N N N 57.621 -10.103 68.328 -2.466 -3.496 -1.978 H63 YN3 73 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YN3 C26 C25 SING N N 1 YN3 O24 C23 DOUB N N 2 YN3 N29 N30 SING Y N 3 YN3 N29 C14 DOUB Y N 4 YN3 N30 C32 SING Y N 5 YN3 C23 C25 SING N N 6 YN3 C23 N22 SING N N 7 YN3 C20 C19 DOUB Y N 8 YN3 C20 C21 SING Y N 9 YN3 C19 C18 SING Y N 10 YN3 C14 N15 SING N N 11 YN3 C14 C13 SING Y N 12 YN3 N15 C16 SING N N 13 YN3 C32 C13 DOUB Y N 14 YN3 C32 C33 SING N N 15 YN3 C34 C33 SING N N 16 YN3 N22 C21 SING N N 17 YN3 C21 C27 DOUB Y N 18 YN3 C13 C12 SING N N 19 YN3 C18 C16 SING N N 20 YN3 C18 C28 DOUB Y N 21 YN3 C16 O17 DOUB N N 22 YN3 C33 C35 SING N N 23 YN3 C33 N11 SING N N 24 YN3 C27 C28 SING Y N 25 YN3 C12 N11 SING N N 26 YN3 N11 C9 SING N N 27 YN3 C9 O10 DOUB N N 28 YN3 C9 N8 SING N N 29 YN3 C1 N2 SING N N 30 YN3 N8 C6 SING N N 31 YN3 N2 C5 SING N N 32 YN3 N2 C4 SING N N 33 YN3 C6 C5 SING N N 34 YN3 C6 C36 SING N N 35 YN3 C36 C37 DOUB Y N 36 YN3 C36 C41 SING Y N 37 YN3 C37 C38 SING Y N 38 YN3 C41 C40 DOUB Y N 39 YN3 C38 C39 DOUB Y N 40 YN3 C40 C39 SING Y N 41 YN3 C1 H42 SING N N 42 YN3 C1 H43 SING N N 43 YN3 C1 H44 SING N N 44 YN3 C5 H49 SING N N 45 YN3 C5 H48 SING N N 46 YN3 C6 H7 SING N N 47 YN3 C12 H51 SING N N 48 YN3 C12 H52 SING N N 49 YN3 C19 H54 SING N N 50 YN3 C25 H57 SING N N 51 YN3 C25 H73 SING N N 52 YN3 C26 H58 SING N N 53 YN3 C26 H59 SING N N 54 YN3 C26 H1 SING N N 55 YN3 C27 H60 SING N N 56 YN3 C28 H61 SING N N 57 YN3 C35 H66 SING N N 58 YN3 C35 H67 SING N N 59 YN3 C35 H65 SING N N 60 YN3 C37 H68 SING N N 61 YN3 C38 H69 SING N N 62 YN3 C39 H70 SING N N 63 YN3 C40 H71 SING N N 64 YN3 N22 H56 SING N N 65 YN3 C20 H55 SING N N 66 YN3 N15 H53 SING N N 67 YN3 N30 H31 SING N N 68 YN3 N8 H50 SING N N 69 YN3 C4 H45 SING N N 70 YN3 C4 H46 SING N N 71 YN3 C4 H47 SING N N 72 YN3 C41 H72 SING N N 73 YN3 C34 H64 SING N N 74 YN3 C34 H62 SING N N 75 YN3 C34 H63 SING N N 76 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YN3 InChI InChI 1.06 "InChI=1S/C28H35N7O3/c1-6-23(36)29-20-14-12-19(13-15-20)26(37)31-25-21-16-35(28(2,3)24(21)32-33-25)27(38)30-22(17-34(4)5)18-10-8-7-9-11-18/h7-15,22H,6,16-17H2,1-5H3,(H,29,36)(H,30,38)(H2,31,32,33,37)/t22-/m1/s1" YN3 InChIKey InChI 1.06 VWSDWOYFAZHKHK-JOCHJYFZSA-N YN3 SMILES_CANONICAL CACTVS 3.385 "CCC(=O)Nc1ccc(cc1)C(=O)Nc2n[nH]c3c2CN(C(=O)N[C@H](CN(C)C)c4ccccc4)C3(C)C" YN3 SMILES CACTVS 3.385 "CCC(=O)Nc1ccc(cc1)C(=O)Nc2n[nH]c3c2CN(C(=O)N[CH](CN(C)C)c4ccccc4)C3(C)C" YN3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)Nc1ccc(cc1)C(=O)Nc2c3c([nH]n2)C(N(C3)C(=O)N[C@H](CN(C)C)c4ccccc4)(C)C" YN3 SMILES "OpenEye OEToolkits" 2.0.7 "CCC(=O)Nc1ccc(cc1)C(=O)Nc2c3c([nH]n2)C(N(C3)C(=O)NC(CN(C)C)c4ccccc4)(C)C" # _pdbx_chem_comp_identifier.comp_id YN3 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(1~{S})-2-(dimethylamino)-1-phenyl-ethyl]-6,6-dimethyl-3-[[4-(propanoylamino)phenyl]carbonylamino]-1,4-dihydropyrrolo[3,4-c]pyrazole-5-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YN3 "Create component" 2023-12-06 PDBE YN3 "Initial release" 2024-05-29 RCSB YN3 "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id YN3 _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C26 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #