data_YN4 # _chem_comp.id YN4 _chem_comp.name "ETHYL 4-[(2-CYANOETHYL)SULFANYL]-6-{[6-(PIPERAZIN-1-YL)" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H27 N5 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-04-06 _chem_comp.pdbx_modified_date 2017-02-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 477.579 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YN4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5G21 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YN4 N N N 0 1 N N N 2.385 50.641 62.119 -4.856 -4.219 2.558 N YN4 1 YN4 C7 C7 C 0 1 N N N 2.704 51.653 61.725 -4.797 -3.501 1.679 C7 YN4 2 YN4 C6 C6 C 0 1 N N N 3.146 52.911 61.219 -4.722 -2.572 0.540 C6 YN4 3 YN4 C5 C5 C 0 1 N N N 4.552 52.422 60.899 -3.264 -2.426 0.097 C5 YN4 4 YN4 S S S 0 1 N N N 5.519 52.752 62.359 -3.171 -1.284 -1.304 S YN4 5 YN4 C4 C4 C 0 1 Y N N 5.028 51.800 63.739 -3.408 0.248 -0.465 C4 YN4 6 YN4 C8 C8 C 0 1 Y N N 5.361 50.384 63.649 -2.307 0.983 0.042 C8 YN4 7 YN4 C23 C23 C 0 1 Y N N 4.865 49.575 64.766 -2.547 2.207 0.708 C23 YN4 8 YN4 N4 N4 N 0 1 Y N N 4.150 50.086 65.786 -3.801 2.663 0.854 N4 YN4 9 YN4 C24 C24 C 0 1 Y N N 3.835 51.391 65.888 -4.835 2.007 0.396 C24 YN4 10 YN4 C3 C3 C 0 1 Y N N 4.272 52.255 64.908 -4.692 0.785 -0.283 C3 YN4 11 YN4 C C C 0 1 N N N 3.847 53.656 65.160 -5.874 0.075 -0.791 C YN4 12 YN4 O1 O1 O 0 1 N N N 4.735 54.659 64.817 -7.104 0.597 -0.612 O1 YN4 13 YN4 C1 C1 C 0 1 N N N 4.330 56.022 65.163 -8.225 -0.159 -1.141 C1 YN4 14 YN4 C2 C2 C 0 1 N N N 4.505 56.200 66.658 -9.528 0.586 -0.843 C2 YN4 15 YN4 O O O 0 1 N N N 2.814 53.920 65.736 -5.743 -0.985 -1.374 O YN4 16 YN4 C22 C22 C 0 1 Y N N 5.098 48.213 64.723 -1.458 2.937 1.212 C22 YN4 17 YN4 C21 C21 C 0 1 Y N N 5.808 47.711 63.691 -0.191 2.465 1.058 C21 YN4 18 YN4 C10 C10 C 0 1 Y N N 6.286 48.449 62.630 0.050 1.256 0.401 C10 YN4 19 YN4 C9 C9 C 0 1 Y N N 6.072 49.829 62.592 -0.995 0.515 -0.104 C9 YN4 20 YN4 O2 O2 O 0 1 N N N 6.981 47.799 61.622 1.326 0.808 0.261 O2 YN4 21 YN4 C11 C11 C 0 1 N N N 6.945 48.362 60.257 2.364 1.623 0.808 C11 YN4 22 YN4 C12 C12 C 0 1 Y N N 5.755 47.717 59.584 3.700 0.970 0.558 C12 YN4 23 YN4 C20 C20 C 0 1 Y N N 4.514 48.389 59.458 4.407 1.249 -0.594 C20 YN4 24 YN4 N3 N3 N 0 1 Y N N 3.483 47.785 58.853 5.577 0.684 -0.823 N3 YN4 25 YN4 C15 C15 C 0 1 Y N N 3.553 46.481 58.415 6.117 -0.167 0.036 C15 YN4 26 YN4 C14 C14 C 0 1 Y N N 4.754 45.799 58.511 5.459 -0.494 1.217 C14 YN4 27 YN4 C13 C13 C 0 1 Y N N 5.850 46.438 59.087 4.233 0.087 1.487 C13 YN4 28 YN4 N1 N1 N 0 1 N N N 2.432 45.840 57.944 7.352 -0.740 -0.246 N1 YN4 29 YN4 C19 C19 C 0 1 N N N 2.571 44.418 57.639 7.871 -0.264 -1.536 C19 YN4 30 YN4 C18 C18 C 0 1 N N N 1.360 43.811 56.895 9.190 -0.976 -1.846 C18 YN4 31 YN4 N2 N2 N 0 1 N N N 0.092 44.386 57.356 10.151 -0.714 -0.765 N2 YN4 32 YN4 C17 C17 C 0 1 N N N -0.026 45.832 57.413 9.632 -1.189 0.525 C17 YN4 33 YN4 C16 C16 C 0 1 N N N 1.126 46.453 58.180 8.313 -0.478 0.834 C16 YN4 34 YN4 H61C H61C H 0 0 N N N 2.590 53.237 60.328 -5.315 -2.962 -0.287 H61C YN4 35 YN4 H62C H62C H 0 0 N N N 3.129 53.710 61.975 -5.110 -1.599 0.839 H62C YN4 36 YN4 H51C H51C H 0 0 N N N 4.543 51.344 60.680 -2.671 -2.036 0.924 H51C YN4 37 YN4 H52C H52C H 0 0 N N N 4.961 52.968 60.036 -2.876 -3.400 -0.202 H52C YN4 38 YN4 H9 H9 H 0 1 N N N 6.442 50.436 61.779 -0.804 -0.420 -0.611 H9 YN4 39 YN4 H22 H22 H 0 1 N N N 4.720 47.564 65.499 -1.627 3.874 1.722 H22 YN4 40 YN4 H24 H24 H 0 1 N N N 3.251 51.753 66.721 -5.824 2.417 0.539 H24 YN4 41 YN4 H11C H11C H 0 0 N N N 4.960 56.746 64.625 -8.110 -0.274 -2.218 H11C YN4 42 YN4 H12C H12C H 0 0 N N N 3.276 56.179 64.890 -8.254 -1.142 -0.671 H12C YN4 43 YN4 H21C H21C H 0 0 N N N 4.206 57.219 66.944 -9.643 0.701 0.234 H21C YN4 44 YN4 H22C H22C H 0 0 N N N 3.876 55.471 67.190 -9.500 1.569 -1.313 H22C YN4 45 YN4 H23C H23C H 0 0 N N N 5.560 56.038 66.925 -10.370 0.018 -1.240 H23C YN4 46 YN4 H21 H21 H 0 1 N N N 6.017 46.651 63.697 0.640 3.033 1.448 H21 YN4 47 YN4 H111 H111 H 0 0 N N N 6.820 49.454 60.295 2.345 2.604 0.332 H111 YN4 48 YN4 H112 H112 H 0 0 N N N 7.871 48.118 59.716 2.210 1.736 1.881 H112 YN4 49 YN4 H20 H20 H 0 1 N N N 4.399 49.389 59.850 3.998 1.939 -1.318 H20 YN4 50 YN4 H13 H13 H 0 1 N N N 6.795 45.918 59.144 3.701 -0.144 2.398 H13 YN4 51 YN4 H14 H14 H 0 1 N N N 4.840 44.787 58.145 5.901 -1.189 1.916 H14 YN4 52 YN4 H191 H191 H 0 0 N N N 3.464 44.285 57.011 7.148 -0.481 -2.322 H191 YN4 53 YN4 H192 H192 H 0 0 N N N 2.704 43.873 58.585 8.042 0.811 -1.485 H192 YN4 54 YN4 H161 H161 H 0 0 N N N 0.902 46.374 59.254 8.488 0.595 0.912 H161 YN4 55 YN4 H162 H162 H 0 0 N N N 1.191 47.514 57.896 7.911 -0.850 1.777 H162 YN4 56 YN4 H181 H181 H 0 0 N N N 1.469 44.007 55.818 9.015 -2.049 -1.924 H181 YN4 57 YN4 H182 H182 H 0 0 N N N 1.343 42.725 57.070 9.592 -0.604 -2.788 H182 YN4 58 YN4 H2 H2 H 0 1 N N N -0.624 44.054 56.742 11.047 -1.129 -0.970 H2 YN4 59 YN4 H171 H171 H 0 0 N N N -0.030 46.231 56.388 9.461 -2.265 0.474 H171 YN4 60 YN4 H172 H172 H 0 0 N N N -0.971 46.094 57.912 10.355 -0.973 1.310 H172 YN4 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YN4 N C7 TRIP N N 1 YN4 C7 C6 SING N N 2 YN4 C6 C5 SING N N 3 YN4 C5 S SING N N 4 YN4 S C4 SING N N 5 YN4 C4 C8 SING Y N 6 YN4 C4 C3 DOUB Y N 7 YN4 C8 C23 DOUB Y N 8 YN4 C8 C9 SING Y N 9 YN4 C23 N4 SING Y N 10 YN4 C23 C22 SING Y N 11 YN4 N4 C24 DOUB Y N 12 YN4 C24 C3 SING Y N 13 YN4 C3 C SING N N 14 YN4 C O1 SING N N 15 YN4 C O DOUB N N 16 YN4 O1 C1 SING N N 17 YN4 C1 C2 SING N N 18 YN4 C22 C21 DOUB Y N 19 YN4 C21 C10 SING Y N 20 YN4 C10 C9 DOUB Y N 21 YN4 C10 O2 SING N N 22 YN4 O2 C11 SING N N 23 YN4 C11 C12 SING N N 24 YN4 C12 C20 SING Y N 25 YN4 C12 C13 DOUB Y N 26 YN4 C20 N3 DOUB Y N 27 YN4 N3 C15 SING Y N 28 YN4 C15 C14 DOUB Y N 29 YN4 C15 N1 SING N N 30 YN4 C14 C13 SING Y N 31 YN4 N1 C19 SING N N 32 YN4 N1 C16 SING N N 33 YN4 C19 C18 SING N N 34 YN4 C18 N2 SING N N 35 YN4 N2 C17 SING N N 36 YN4 C17 C16 SING N N 37 YN4 C6 H61C SING N N 38 YN4 C6 H62C SING N N 39 YN4 C5 H51C SING N N 40 YN4 C5 H52C SING N N 41 YN4 C9 H9 SING N N 42 YN4 C22 H22 SING N N 43 YN4 C24 H24 SING N N 44 YN4 C1 H11C SING N N 45 YN4 C1 H12C SING N N 46 YN4 C2 H21C SING N N 47 YN4 C2 H22C SING N N 48 YN4 C2 H23C SING N N 49 YN4 C21 H21 SING N N 50 YN4 C11 H111 SING N N 51 YN4 C11 H112 SING N N 52 YN4 C20 H20 SING N N 53 YN4 C13 H13 SING N N 54 YN4 C14 H14 SING N N 55 YN4 C19 H191 SING N N 56 YN4 C19 H192 SING N N 57 YN4 C16 H161 SING N N 58 YN4 C16 H162 SING N N 59 YN4 C18 H181 SING N N 60 YN4 C18 H182 SING N N 61 YN4 N2 H2 SING N N 62 YN4 C17 H171 SING N N 63 YN4 C17 H172 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YN4 InChI InChI 1.03 "InChI=1S/C25H27N5O3S/c1-2-32-25(31)21-16-28-22-6-5-19(14-20(22)24(21)34-13-3-8-26)33-17-18-4-7-23(29-15-18)30-11-9-27-10-12-30/h4-7,14-16,27H,2-3,9-13,17H2,1H3" YN4 InChIKey InChI 1.03 BOXNSEIJTUHQDY-UHFFFAOYSA-N YN4 SMILES_CANONICAL CACTVS 3.385 "CCOC(=O)c1cnc2ccc(OCc3ccc(nc3)N4CCNCC4)cc2c1SCCC#N" YN4 SMILES CACTVS 3.385 "CCOC(=O)c1cnc2ccc(OCc3ccc(nc3)N4CCNCC4)cc2c1SCCC#N" YN4 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCOC(=O)c1cnc2ccc(cc2c1SCCC#N)OCc3ccc(nc3)N4CCNCC4" YN4 SMILES "OpenEye OEToolkits" 1.7.6 "CCOC(=O)c1cnc2ccc(cc2c1SCCC#N)OCc3ccc(nc3)N4CCNCC4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YN4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "ethyl 4-(2-cyanoethylsulfanyl)-6-[(6-piperazin-1-ylpyridin-3-yl)methoxy]quinoline-3-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YN4 "Create component" 2016-04-06 EBI YN4 "Initial release" 2017-02-15 RCSB #