data_YNB # _chem_comp.id YNB _chem_comp.name "[2-methyl-4-(trifluoromethoxy)phenyl]methyl (8R)-2-(1,4,6,7-tetrahydro-5H-[1,2,3]triazolo[4,5-c]pyridine-5-carbonyl)-6,7-dihydropyrazolo[1,5-a]pyrazine-5(4H)-carboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H22 F3 N7 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-19 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 505.450 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YNB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G4H _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YNB C11 C1 C 0 1 N N N N N N -12.217 10.856 53.565 -6.319 2.743 0.856 C11 YNB 1 YNB C13 C2 C 0 1 N N N N N N -11.523 13.214 54.167 -5.807 0.270 0.998 C13 YNB 2 YNB C15 C3 C 0 1 Y N N N N N -10.343 11.102 55.012 -7.944 1.119 -0.052 C15 YNB 3 YNB C19 C4 C 0 1 N N N N N N -13.010 12.725 52.139 -4.123 1.871 0.206 C19 YNB 4 YNB C21 C5 C 0 1 N N N N N N -14.935 7.231 47.553 1.156 -2.831 -0.325 C21 YNB 5 YNB C24 C6 C 0 1 N N N N N N -13.902 6.784 45.456 3.457 -2.596 0.263 C24 YNB 6 YNB C25 C7 C 0 1 Y N N N N N -13.000 5.792 44.750 4.538 -1.546 0.274 C25 YNB 7 YNB C26 C8 C 0 1 Y N N N N N -12.061 6.332 43.862 5.805 -1.865 0.724 C26 YNB 8 YNB C27 C9 C 0 1 Y N N N N N -11.197 5.510 43.175 6.798 -0.904 0.736 C27 YNB 9 YNB C28 C10 C 0 1 Y N N N N N -11.263 4.136 43.357 6.522 0.382 0.296 C28 YNB 10 YNB N1 N1 N 0 1 N N N N N N -14.431 8.473 47.960 -0.017 -2.358 -0.790 N1 YNB 11 YNB C2 C11 C 0 1 N N N N N N -13.170 8.972 47.393 -1.202 -3.224 -0.884 C2 YNB 12 YNB C3 C12 C 0 1 N N N N N N -12.211 9.409 48.529 -2.288 -2.698 0.060 C3 YNB 13 YNB C4 C13 C 0 1 N N N N N N -15.211 9.437 48.765 -0.156 -0.953 -1.218 C4 YNB 14 YNB C5 C14 C 0 1 Y N N N N N -14.324 10.263 49.630 -1.473 -0.454 -0.674 C5 YNB 15 YNB N6 N2 N 0 1 Y N N N N N -12.940 10.291 49.462 -2.419 -1.244 -0.112 N6 YNB 16 YNB N7 N3 N 0 1 Y N N N N N -12.316 11.214 50.242 -3.424 -0.527 0.242 N7 YNB 17 YNB C8 C15 C 0 1 Y N N N N N -13.285 11.853 50.975 -3.206 0.741 -0.048 C8 YNB 18 YNB C9 C16 C 0 1 Y N N N N N -14.718 10.904 50.688 -1.926 0.813 -0.651 C9 YNB 19 YNB N10 N4 N 0 1 N N N N N N -12.105 12.282 53.141 -5.367 1.638 0.668 N10 YNB 20 YNB C12 C17 C 0 1 N N N N N N -10.840 10.251 53.933 -7.504 2.557 -0.100 C12 YNB 21 YNB C14 C18 C 0 1 Y N N N N N -10.651 12.461 55.128 -7.193 0.098 0.430 C14 YNB 22 YNB N16 N5 N 0 1 Y N N N N N -9.522 10.809 56.097 -9.104 0.574 -0.458 N16 YNB 23 YNB N17 N6 N 0 1 Y N N N N N -9.347 11.960 56.834 -9.049 -0.696 -0.236 N17 YNB 24 YNB N18 N7 N 0 1 Y N N N N N -10.002 12.941 56.282 -7.915 -1.008 0.295 N18 YNB 25 YNB O20 O1 O 0 1 N N N N N N -13.569 13.819 52.223 -3.754 3.011 -0.001 O20 YNB 26 YNB O22 O2 O 0 1 N N N N N N -16.062 6.849 47.823 1.247 -3.990 0.027 O22 YNB 27 YNB O23 O3 O 0 1 N N N N N N -14.069 6.435 46.831 2.227 -2.019 -0.249 O23 YNB 28 YNB C29 C19 C 0 1 Y N N N N N -12.180 3.556 44.233 5.248 0.700 -0.155 C29 YNB 29 YNB C30 C20 C 0 1 Y N N N N N -13.053 4.405 44.930 4.261 -0.266 -0.170 C30 YNB 30 YNB O31 O4 O 0 1 N N N N N N -10.388 3.369 42.637 7.496 1.329 0.307 O31 YNB 31 YNB C32 C21 C 0 1 N N N N N N -10.377 1.983 42.697 7.140 2.632 -0.160 C32 YNB 32 YNB F33 F1 F 0 1 N N N N N N -9.697 1.437 41.681 6.108 3.146 0.632 F33 YNB 33 YNB F34 F2 F 0 1 N N N N N N -9.801 1.676 43.845 8.253 3.476 -0.081 F34 YNB 34 YNB F35 F3 F 0 1 N N N N N N -11.589 1.434 42.672 6.711 2.550 -1.489 F35 YNB 35 YNB C36 C22 C 0 1 N N N N N N -11.960 7.796 43.633 6.105 -3.262 1.202 C36 YNB 36 YNB H44 H1 H 0 1 N N N N N N -12.877 10.797 54.443 -6.678 2.743 1.885 H44 YNB 37 YNB H45 H2 H 0 1 N N N N N N -12.652 10.273 52.740 -5.824 3.691 0.643 H45 YNB 38 YNB H49 H3 H 0 1 N N N N N N -10.922 13.982 53.658 -5.129 -0.456 0.549 H49 YNB 39 YNB H48 H4 H 0 1 N N N N N N -12.341 13.697 54.722 -5.829 0.136 2.079 H48 YNB 40 YNB H52 H5 H 0 1 N N N N N N -14.886 6.789 44.964 3.763 -3.424 -0.376 H52 YNB 41 YNB H51 H6 H 0 1 N N N N N N -13.454 7.787 45.391 3.293 -2.960 1.277 H51 YNB 42 YNB H53 H7 H 0 1 N N N N N N -10.470 5.933 42.497 7.788 -1.154 1.088 H53 YNB 43 YNB H38 H8 H 0 1 N N N N N N -12.695 8.174 46.803 -1.576 -3.220 -1.907 H38 YNB 44 YNB H37 H9 H 0 1 N N N N N N -13.380 9.834 46.742 -0.933 -4.241 -0.598 H37 YNB 45 YNB H39 H10 H 0 1 N N N N N N -11.849 8.521 49.068 -3.238 -3.179 -0.175 H39 YNB 46 YNB H40 H11 H 0 1 N N N N N N -11.356 9.952 48.101 -2.013 -2.920 1.091 H40 YNB 47 YNB H42 H12 H 0 1 N N N N N N -15.769 10.100 48.088 0.663 -0.359 -0.813 H42 YNB 48 YNB H41 H13 H 0 1 N N N N N N -15.917 8.884 49.401 -0.157 -0.894 -2.306 H41 YNB 49 YNB H43 H14 H 0 1 N N N N N N -15.653 10.862 51.228 -1.423 1.696 -1.015 H43 YNB 50 YNB H46 H15 H 0 1 N N N N N N -10.951 9.212 54.277 -8.328 3.201 0.208 H46 YNB 51 YNB H47 H16 H 0 1 N N N N N N -10.159 10.280 53.070 -7.199 2.812 -1.115 H47 YNB 52 YNB H50 H17 H 0 1 N N N N N N -9.126 9.915 56.306 -9.852 1.052 -0.849 H50 YNB 53 YNB H54 H18 H 0 1 N N N N N N -12.217 2.485 44.371 5.031 1.701 -0.498 H54 YNB 54 YNB H55 H19 H 0 1 N N N N N N -13.775 3.983 45.614 3.271 -0.020 -0.525 H55 YNB 55 YNB H58 H20 H 0 1 N N N N N N -11.248 8.232 44.350 6.448 -3.868 0.363 H58 YNB 56 YNB H56 H21 H 0 1 N N N N N N -11.609 7.983 42.608 6.882 -3.226 1.966 H56 YNB 57 YNB H57 H22 H 0 1 N N N N N N -12.949 8.258 43.772 5.201 -3.704 1.623 H57 YNB 58 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YNB N1 C2 SING N N 1 YNB N1 C4 SING N N 2 YNB N1 C21 SING N N 3 YNB C2 C3 SING N N 4 YNB C3 N6 SING N N 5 YNB C4 C5 SING N N 6 YNB C5 N6 SING Y N 7 YNB C5 C9 DOUB Y N 8 YNB N6 N7 SING Y N 9 YNB N7 C8 DOUB Y N 10 YNB C8 C9 SING Y N 11 YNB C8 C19 SING N N 12 YNB N10 C11 SING N N 13 YNB N10 C13 SING N N 14 YNB N10 C19 SING N N 15 YNB C11 C12 SING N N 16 YNB C12 C15 SING N N 17 YNB C13 C14 SING N N 18 YNB C14 C15 DOUB Y N 19 YNB C14 N18 SING Y N 20 YNB C15 N16 SING Y N 21 YNB N16 N17 SING Y N 22 YNB N17 N18 DOUB Y N 23 YNB C19 O20 DOUB N N 24 YNB C21 O22 DOUB N N 25 YNB C21 O23 SING N N 26 YNB O23 C24 SING N N 27 YNB C24 C25 SING N N 28 YNB C25 C26 DOUB Y N 29 YNB C25 C30 SING Y N 30 YNB C26 C27 SING Y N 31 YNB C26 C36 SING N N 32 YNB C27 C28 DOUB Y N 33 YNB C28 C29 SING Y N 34 YNB C28 O31 SING N N 35 YNB C29 C30 DOUB Y N 36 YNB O31 C32 SING N N 37 YNB C32 F33 SING N N 38 YNB C32 F34 SING N N 39 YNB C32 F35 SING N N 40 YNB C11 H44 SING N N 41 YNB C11 H45 SING N N 42 YNB C13 H49 SING N N 43 YNB C13 H48 SING N N 44 YNB C24 H52 SING N N 45 YNB C24 H51 SING N N 46 YNB C27 H53 SING N N 47 YNB C2 H38 SING N N 48 YNB C2 H37 SING N N 49 YNB C3 H39 SING N N 50 YNB C3 H40 SING N N 51 YNB C4 H42 SING N N 52 YNB C4 H41 SING N N 53 YNB C9 H43 SING N N 54 YNB C12 H46 SING N N 55 YNB C12 H47 SING N N 56 YNB N16 H50 SING N N 57 YNB C29 H54 SING N N 58 YNB C30 H55 SING N N 59 YNB C36 H58 SING N N 60 YNB C36 H56 SING N N 61 YNB C36 H57 SING N N 62 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YNB SMILES ACDLabs 12.01 "FC(F)(F)Oc1ccc(COC(=O)N2Cc3cc(nn3CC2)C(=O)N2CCc3[NH]nnc3C2)c(C)c1" YNB InChI InChI 1.06 "InChI=1S/C22H22F3N7O4/c1-13-8-16(36-22(23,24)25)3-2-14(13)12-35-21(34)31-6-7-32-15(10-31)9-18(28-32)20(33)30-5-4-17-19(11-30)27-29-26-17/h2-3,8-9H,4-7,10-12H2,1H3,(H,26,27,29)" YNB InChIKey InChI 1.06 ADUKTAWVTISOHD-UHFFFAOYSA-N YNB SMILES_CANONICAL CACTVS 3.385 "Cc1cc(OC(F)(F)F)ccc1COC(=O)N2CCn3nc(cc3C2)C(=O)N4CCc5[nH]nnc5C4" YNB SMILES CACTVS 3.385 "Cc1cc(OC(F)(F)F)ccc1COC(=O)N2CCn3nc(cc3C2)C(=O)N4CCc5[nH]nnc5C4" YNB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(ccc1COC(=O)N2CCn3c(cc(n3)C(=O)N4CCc5c(nn[nH]5)C4)C2)OC(F)(F)F" YNB SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc(ccc1COC(=O)N2CCn3c(cc(n3)C(=O)N4CCc5c(nn[nH]5)C4)C2)OC(F)(F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YNB "SYSTEMATIC NAME" ACDLabs 12.01 "[2-methyl-4-(trifluoromethoxy)phenyl]methyl (8R)-2-(1,4,6,7-tetrahydro-5H-[1,2,3]triazolo[4,5-c]pyridine-5-carbonyl)-6,7-dihydropyrazolo[1,5-a]pyrazine-5(4H)-carboxylate" YNB "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[2-methyl-4-(trifluoromethyloxy)phenyl]methyl 2-(1,4,6,7-tetrahydro-[1,2,3]triazolo[4,5-c]pyridin-5-ylcarbonyl)-6,7-dihydro-4~{H}-pyrazolo[1,5-a]pyrazine-5-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YNB "Create component" 2023-06-19 RCSB YNB "Initial release" 2024-12-18 RCSB #