data_YNH # _chem_comp.id YNH _chem_comp.name "methyl 3-[2-(2,4-dimethylphenoxy)ethanoylamino]-4-(4-ethylpiperazin-1-yl)benzoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H31 N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-12-06 _chem_comp.pdbx_modified_date 2025-02-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 425.521 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YNH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8X9T _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YNH C10 C1 C 0 1 N N N N N N 129.907 131.707 98.663 2.348 0.453 -0.224 C10 YNH 1 YNH N12 N1 N 0 1 N N N N N N 131.246 130.624 96.783 -0.115 0.236 -0.303 N12 YNH 2 YNH C15 C2 C 0 1 Y N N N N N 133.537 131.011 95.965 -1.236 -1.897 -0.245 C15 YNH 3 YNH C17 C3 C 0 1 Y N N N N N 134.729 129.276 94.824 -3.638 -1.996 0.043 C17 YNH 4 YNH C20 C4 C 0 1 N N N N N N 135.871 131.498 95.153 -2.359 -4.117 -0.195 C20 YNH 5 YNH C26 C5 C 0 1 N N N N N N 129.705 127.242 97.375 -3.320 3.598 -0.976 C26 YNH 6 YNH C28 C6 C 0 1 N N N N N N 128.971 127.776 95.415 -3.085 3.483 1.430 C28 YNH 7 YNH C01 C7 C 0 1 Y N N N N N 127.098 132.925 96.684 5.826 -0.493 0.435 C01 YNH 8 YNH C02 C8 C 0 1 Y N N N N N 127.964 132.710 97.743 4.698 0.215 0.046 C02 YNH 9 YNH C03 C9 C 0 1 Y N N N N N 127.799 133.410 98.925 4.832 1.483 -0.500 C03 YNH 10 YNH C04 C10 C 0 1 Y N N N N N 126.768 134.327 99.046 6.088 2.038 -0.655 C04 YNH 11 YNH C05 C11 C 0 1 Y N N N N N 125.903 134.542 97.987 7.210 1.331 -0.266 C05 YNH 12 YNH C06 C12 C 0 1 Y N N N N N 126.067 133.841 96.805 7.079 0.066 0.278 C06 YNH 13 YNH C07 C13 C 0 1 N N N N N N 127.283 132.149 95.383 5.684 -1.868 1.034 C07 YNH 14 YNH C08 C14 C 0 1 N N N N N N 124.768 135.553 98.123 8.579 1.939 -0.436 C08 YNH 15 YNH C11 C15 C 0 1 N N N N N N 131.245 131.267 98.083 1.073 -0.312 0.020 C11 YNH 16 YNH C14 C16 C 0 1 Y N N N N N 132.450 130.165 96.121 -1.291 -0.518 -0.185 C14 YNH 17 YNH C16 C17 C 0 1 Y N N N N N 134.676 130.565 95.320 -2.412 -2.646 -0.131 C16 YNH 18 YNH C18 C18 C 0 1 Y N N N N N 133.641 128.434 94.977 -3.686 -0.622 0.114 C18 YNH 19 YNH C19 C19 C 0 1 Y N N N N N 132.502 128.878 95.620 -2.519 0.125 -0.005 C19 YNH 20 YNH C23 C20 C 0 1 N N N N N N 137.562 132.727 96.217 -3.366 -6.282 -0.158 C23 YNH 21 YNH C25 C21 C 0 1 N N N N N N 131.188 127.275 97.017 -3.352 2.070 -1.047 C25 YNH 22 YNH C29 C22 C 0 1 N N N N N N 130.345 127.926 94.762 -3.116 1.954 1.359 C29 YNH 23 YNH C30 C23 C 0 1 N N N N N N 127.785 126.570 96.725 -5.284 3.681 0.437 C30 YNH 24 YNH C31 C24 C 0 1 N N N N N N 127.743 125.159 97.301 -6.100 4.473 -0.587 C31 YNH 25 YNH N24 N2 N 0 1 N N N N N N 131.365 127.991 95.779 -2.572 1.514 0.067 N24 YNH 26 YNH N27 N3 N 0 1 N N N N N N 129.003 126.838 96.339 -3.865 4.038 0.315 N27 YNH 27 YNH O09 O1 O 0 1 N N N N N N 128.997 131.780 97.601 3.464 -0.333 0.198 O09 YNH 28 YNH O13 O2 O 0 1 N N N N N N 132.250 131.448 98.682 1.116 -1.422 0.509 O13 YNH 29 YNH O21 O3 O 0 1 N N N N N N 135.930 132.221 94.217 -1.294 -4.681 -0.346 O21 YNH 30 YNH O22 O4 O 0 1 N N N N N N 136.893 131.503 96.107 -3.493 -4.838 -0.086 O22 YNH 31 YNH H1 H1 H 0 1 N N N N N N 130.009 132.693 99.140 2.441 0.674 -1.288 H1 YNH 32 YNH H2 H2 H 0 1 N N N N N N 129.560 130.975 99.407 2.326 1.385 0.340 H2 YNH 33 YNH H3 H3 H 0 1 N N N N N N 130.370 130.491 96.320 -0.156 1.152 -0.619 H3 YNH 34 YNH H4 H4 H 0 1 N N N N N N 133.494 132.020 96.348 -0.289 -2.396 -0.383 H4 YNH 35 YNH H5 H5 H 0 1 N N N N N N 135.617 128.927 94.318 -4.546 -2.573 0.135 H5 YNH 36 YNH H6 H6 H 0 1 N N N N N N 129.378 128.251 97.666 -2.291 3.945 -1.074 H6 YNH 37 YNH H7 H7 H 0 1 N N N N N N 129.548 126.549 98.215 -3.922 4.012 -1.785 H7 YNH 38 YNH H8 H8 H 0 1 N N N N N N 128.683 128.731 95.878 -3.515 3.813 2.375 H8 YNH 39 YNH H9 H9 H 0 1 N N N N N N 128.232 127.503 94.647 -2.053 3.829 1.360 H9 YNH 40 YNH H10 H10 H 0 1 N N N N N N 128.473 133.242 99.752 3.956 2.036 -0.804 H10 YNH 41 YNH H11 H11 H 0 1 N N N N N N 126.639 134.875 99.968 6.193 3.026 -1.080 H11 YNH 42 YNH H12 H12 H 0 1 N N N N N N 125.392 134.008 95.979 7.957 -0.484 0.581 H12 YNH 43 YNH H13 H13 H 0 1 N N N N N N 127.950 132.710 94.712 5.581 -1.784 2.116 H13 YNH 44 YNH H14 H14 H 0 1 N N N N N N 127.726 131.166 95.602 4.799 -2.355 0.622 H14 YNH 45 YNH H15 H15 H 0 1 N N N N N N 126.306 132.011 94.897 6.567 -2.461 0.798 H15 YNH 46 YNH H16 H16 H 0 1 N N N N N N 123.872 135.048 98.513 8.843 2.497 0.462 H16 YNH 47 YNH H17 H17 H 0 1 N N N N N N 125.070 136.352 98.816 9.310 1.147 -0.600 H17 YNH 48 YNH H18 H18 H 0 1 N N N N N N 124.544 135.988 97.138 8.573 2.612 -1.294 H18 YNH 49 YNH H19 H19 H 0 1 N N N N N N 133.683 127.426 94.592 -4.634 -0.122 0.248 H19 YNH 50 YNH H20 H20 H 0 1 N N N N N N 138.347 132.649 96.984 -2.719 -6.630 0.647 H20 YNH 51 YNH H21 H21 H 0 1 N N N N N N 138.019 132.983 95.250 -4.351 -6.739 -0.056 H21 YNH 52 YNH H22 H22 H 0 1 N N N N N N 136.846 133.512 96.504 -2.933 -6.561 -1.118 H22 YNH 53 YNH H23 H23 H 0 1 N N N N N N 131.561 126.247 96.903 -4.384 1.724 -0.976 H23 YNH 54 YNH H24 H24 H 0 1 N N N N N N 131.748 127.781 97.817 -2.922 1.740 -1.993 H24 YNH 55 YNH H25 H25 H 0 1 N N N N N N 130.535 127.062 94.109 -2.514 1.540 2.168 H25 YNH 56 YNH H26 H26 H 0 1 N N N N N N 130.366 128.849 94.164 -4.145 1.607 1.457 H26 YNH 57 YNH H27 H27 H 0 1 N N N N N N 127.476 127.292 97.495 -5.634 3.918 1.442 H27 YNH 58 YNH H28 H28 H 0 1 N N N N N N 127.103 126.637 95.865 -5.407 2.613 0.252 H28 YNH 59 YNH H29 H29 H 0 1 N N N N N N 126.719 124.926 97.628 -5.977 5.540 -0.402 H29 YNH 60 YNH H30 H30 H 0 1 N N N N N N 128.054 124.439 96.530 -5.750 4.235 -1.592 H30 YNH 61 YNH H31 H31 H 0 1 N N N N N N 128.426 125.093 98.160 -7.153 4.207 -0.497 H31 YNH 62 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YNH O21 C20 DOUB N N 1 YNH C29 C28 SING N N 2 YNH C29 N24 SING N N 3 YNH C17 C18 DOUB Y N 4 YNH C17 C16 SING Y N 5 YNH C18 C19 SING Y N 6 YNH C20 C16 SING N N 7 YNH C20 O22 SING N N 8 YNH C16 C15 DOUB Y N 9 YNH C07 C01 SING N N 10 YNH C28 N27 SING N N 11 YNH C19 N24 SING N N 12 YNH C19 C14 DOUB Y N 13 YNH N24 C25 SING N N 14 YNH C15 C14 SING Y N 15 YNH O22 C23 SING N N 16 YNH C14 N12 SING N N 17 YNH N27 C30 SING N N 18 YNH N27 C26 SING N N 19 YNH C01 C06 DOUB Y N 20 YNH C01 C02 SING Y N 21 YNH C30 C31 SING N N 22 YNH N12 C11 SING N N 23 YNH C06 C05 SING Y N 24 YNH C25 C26 SING N N 25 YNH O09 C02 SING N N 26 YNH O09 C10 SING N N 27 YNH C02 C03 DOUB Y N 28 YNH C05 C08 SING N N 29 YNH C05 C04 DOUB Y N 30 YNH C11 C10 SING N N 31 YNH C11 O13 DOUB N N 32 YNH C03 C04 SING Y N 33 YNH C10 H1 SING N N 34 YNH C10 H2 SING N N 35 YNH N12 H3 SING N N 36 YNH C15 H4 SING N N 37 YNH C17 H5 SING N N 38 YNH C26 H6 SING N N 39 YNH C26 H7 SING N N 40 YNH C28 H8 SING N N 41 YNH C28 H9 SING N N 42 YNH C03 H10 SING N N 43 YNH C04 H11 SING N N 44 YNH C06 H12 SING N N 45 YNH C07 H13 SING N N 46 YNH C07 H14 SING N N 47 YNH C07 H15 SING N N 48 YNH C08 H16 SING N N 49 YNH C08 H17 SING N N 50 YNH C08 H18 SING N N 51 YNH C18 H19 SING N N 52 YNH C23 H20 SING N N 53 YNH C23 H21 SING N N 54 YNH C23 H22 SING N N 55 YNH C25 H23 SING N N 56 YNH C25 H24 SING N N 57 YNH C29 H25 SING N N 58 YNH C29 H26 SING N N 59 YNH C30 H27 SING N N 60 YNH C30 H28 SING N N 61 YNH C31 H29 SING N N 62 YNH C31 H30 SING N N 63 YNH C31 H31 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YNH InChI InChI 1.06 "InChI=1S/C24H31N3O4/c1-5-26-10-12-27(13-11-26)21-8-7-19(24(29)30-4)15-20(21)25-23(28)16-31-22-9-6-17(2)14-18(22)3/h6-9,14-15H,5,10-13,16H2,1-4H3,(H,25,28)" YNH InChIKey InChI 1.06 CPGGKKARFZXWMR-UHFFFAOYSA-N YNH SMILES_CANONICAL CACTVS 3.385 "CCN1CCN(CC1)c2ccc(cc2NC(=O)COc3ccc(C)cc3C)C(=O)OC" YNH SMILES CACTVS 3.385 "CCN1CCN(CC1)c2ccc(cc2NC(=O)COc3ccc(C)cc3C)C(=O)OC" YNH SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCN1CCN(CC1)c2ccc(cc2NC(=O)COc3ccc(cc3C)C)C(=O)OC" YNH SMILES "OpenEye OEToolkits" 2.0.7 "CCN1CCN(CC1)c2ccc(cc2NC(=O)COc3ccc(cc3C)C)C(=O)OC" # _pdbx_chem_comp_identifier.comp_id YNH _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "methyl 3-[2-(2,4-dimethylphenoxy)ethanoylamino]-4-(4-ethylpiperazin-1-yl)benzoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YNH "Create component" 2023-12-06 PDBJ YNH "Initial release" 2025-02-12 RCSB #