data_YO2 # _chem_comp.id YO2 _chem_comp.name "[(3aR,3bS,6aR,6bS)-5-(1H-benzotriazole-5-carbonyl)octahydrocyclobuta[1,2-c:3,4-c']dipyrrol-2(1H)-yl]{1-ethyl-4-[(propan-2-yl)oxy]-1H-indol-6-yl}methanone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H32 N6 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-19 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 512.603 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YO2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G4C _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YO2 C10 C1 C 0 1 N N N N N N -10.486 12.653 49.385 3.088 -0.286 0.116 C10 YO2 1 YO2 C15 C2 C 0 1 N N N N N N -14.482 9.013 46.728 -2.641 -0.966 -1.665 C15 YO2 2 YO2 C17 C3 C 0 1 N N N N N N -10.905 13.962 51.623 4.871 -2.036 0.229 C17 YO2 3 YO2 C18 C4 C 0 1 Y N N N N N -9.564 13.624 52.254 5.918 -1.012 0.424 C18 YO2 4 YO2 C20 C5 C 0 1 Y N N N N N -9.539 12.341 52.734 7.096 -1.340 1.111 C20 YO2 5 YO2 C21 C6 C 0 1 Y N N N N N -8.381 11.829 53.306 8.069 -0.404 1.298 C21 YO2 6 YO2 C22 C7 C 0 1 Y N N N N N -8.454 14.585 52.310 5.734 0.270 -0.079 C22 YO2 7 YO2 C23 C8 C 0 1 Y N N N N N -7.233 14.004 52.939 6.728 1.234 0.109 C23 YO2 8 YO2 C24 C9 C 0 1 Y N N N N N -7.290 12.643 53.367 7.901 0.888 0.806 C24 YO2 9 YO2 C28 C10 C 0 1 Y N N N N N -13.712 8.351 45.578 -3.630 -0.248 -0.837 C28 YO2 10 YO2 N1 N1 N 0 1 N N N N N N -13.812 9.768 47.726 -1.332 -0.659 -1.569 N1 YO2 11 YO2 C2 C11 C 0 1 N N N N N N -14.542 10.482 48.844 -0.267 -1.210 -2.416 C2 YO2 12 YO2 C3 C12 C 0 1 N N S N N N -13.433 11.318 49.539 1.060 -0.956 -1.680 C3 YO2 13 YO2 C4 C13 C 0 1 N N R N N N -12.066 10.653 49.115 0.772 0.303 -0.826 C4 YO2 14 YO2 C5 C14 C 0 1 N N N N N N -12.390 9.601 48.043 -0.749 0.277 -0.603 C5 YO2 15 YO2 C6 C15 C 0 1 N N S N N N -12.941 12.643 48.858 1.194 -1.728 -0.361 C6 YO2 16 YO2 C7 C16 C 0 1 N N R N N N -11.551 11.959 48.519 1.562 -0.379 0.304 C7 YO2 17 YO2 C8 C17 C 0 1 N N N N N N -12.635 13.821 49.768 2.477 -2.570 -0.259 C8 YO2 18 YO2 N9 N2 N 0 1 N N N N N N -11.285 13.470 50.340 3.589 -1.663 0.045 N9 YO2 19 YO2 O16 O1 O 0 1 N N N N N N -15.713 8.890 46.771 -3.007 -1.834 -2.434 O16 YO2 20 YO2 O19 O2 O 0 1 N N N N N N -11.711 14.619 52.298 5.166 -3.216 0.235 O19 YO2 21 YO2 N25 N3 N 0 1 Y N N N N N -6.036 12.334 53.833 8.675 2.021 0.832 N25 YO2 22 YO2 N26 N4 N 0 1 Y N N N N N -5.221 13.403 53.773 7.954 3.018 0.160 N26 YO2 23 YO2 N27 N5 N 0 1 Y N N N N N -5.925 14.442 53.244 6.836 2.534 -0.254 N27 YO2 24 YO2 C29 C18 C 0 1 Y N N N N N -13.671 6.998 45.484 -3.520 1.129 -0.666 C29 YO2 25 YO2 C30 C19 C 0 1 Y N N N N N -13.042 9.207 44.593 -4.678 -0.957 -0.232 C30 YO2 26 YO2 C31 C20 C 0 1 Y N N N N N -12.324 8.598 43.507 -5.599 -0.302 0.537 C31 YO2 27 YO2 O32 O3 O 0 1 N N N N N N -11.786 9.206 42.408 -6.613 -0.994 1.121 O32 YO2 28 YO2 C33 C21 C 0 1 N N N N N N -12.063 10.581 42.295 -6.610 -2.413 0.954 C33 YO2 29 YO2 C34 C22 C 0 1 Y N N N N N -12.254 7.212 43.406 -5.497 1.085 0.721 C34 YO2 30 YO2 C35 C23 C 0 1 Y N N N N N -12.943 6.427 44.407 -4.451 1.804 0.113 C35 YO2 31 YO2 N36 N6 N 0 1 Y N N N N N -12.767 5.077 44.113 -4.609 3.127 0.463 N36 YO2 32 YO2 C37 C24 C 0 1 Y N N N N N -11.945 5.001 42.936 -5.707 3.266 1.264 C37 YO2 33 YO2 C38 C25 C 0 1 Y N N N N N -11.624 6.305 42.487 -6.287 2.069 1.459 C38 YO2 34 YO2 C39 C26 C 0 1 N N N N N N -10.688 11.079 42.663 -5.868 -3.063 2.123 C39 YO2 35 YO2 C40 C27 C 0 1 N N N N N N -12.520 10.910 40.848 -8.052 -2.924 0.918 C40 YO2 36 YO2 C41 C28 C 0 1 N N N N N N -13.414 3.943 44.920 -3.730 4.220 0.041 C41 YO2 37 YO2 C42 C29 C 0 1 N N N N N N -12.903 2.515 44.582 -4.174 4.729 -1.332 C42 YO2 38 YO2 H49 H1 H 0 1 N N N N N N -9.872 11.913 49.920 3.319 0.244 -0.808 H49 YO2 39 YO2 H50 H2 H 0 1 N N N N N N -9.836 13.293 48.770 3.537 0.231 0.964 H50 YO2 40 YO2 H51 H3 H 0 1 N N N N N N -10.423 11.725 52.667 7.232 -2.340 1.494 H51 YO2 41 YO2 H52 H4 H 0 1 N N N N N N -8.347 10.820 53.689 8.973 -0.665 1.828 H52 YO2 42 YO2 H53 H5 H 0 1 N N N N N N -8.515 15.597 51.938 4.828 0.520 -0.612 H53 YO2 43 YO2 H44 H6 H 0 1 N N N N N N -15.331 11.135 48.442 -0.418 -2.280 -2.554 H44 YO2 44 YO2 H43 H7 H 0 1 N N N N N N -14.986 9.760 49.545 -0.260 -0.706 -3.382 H43 YO2 45 YO2 H12 H8 H 0 1 N N N N N N -13.558 11.404 50.628 1.942 -0.921 -2.319 H12 YO2 46 YO2 H11 H9 H 0 1 N N N N N N -11.477 10.272 49.962 1.167 1.247 -1.201 H11 YO2 47 YO2 H45 H10 H 0 1 N N N N N N -12.202 8.589 48.432 -1.162 1.274 -0.761 H45 YO2 48 YO2 H46 H11 H 0 1 N N N N N N -11.777 9.769 47.146 -0.968 -0.056 0.411 H46 YO2 49 YO2 H14 H12 H 0 1 N N N N N N -13.518 12.909 47.960 0.287 -2.213 -0.001 H14 YO2 50 YO2 H13 H13 H 0 1 N N N N N N -11.320 11.922 47.444 1.205 -0.202 1.319 H13 YO2 51 YO2 H48 H14 H 0 1 N N N N N N -12.590 14.760 49.197 2.374 -3.306 0.538 H48 YO2 52 YO2 H47 H15 H 0 1 N N N N N N -13.389 13.912 50.563 2.662 -3.076 -1.207 H47 YO2 53 YO2 H54 H16 H 0 1 N N N N N N -5.764 11.433 54.172 9.552 2.115 1.237 H54 YO2 54 YO2 H55 H17 H 0 1 N N N N N N -14.177 6.374 46.206 -2.714 1.671 -1.137 H55 YO2 55 YO2 H56 H18 H 0 1 N N N N N N -13.088 10.282 44.683 -4.757 -2.024 -0.374 H56 YO2 56 YO2 H57 H19 H 0 1 N N N N N N -12.815 10.923 43.022 -6.111 -2.668 0.020 H57 YO2 57 YO2 H58 H20 H 0 1 N N N N N N -11.620 4.085 42.464 -6.057 4.200 1.680 H58 YO2 58 YO2 H59 H21 H 0 1 N N N N N N -11.026 6.565 41.626 -7.173 1.873 2.045 H59 YO2 59 YO2 H60 H22 H 0 1 N N N N N N -10.677 12.179 42.637 -5.867 -4.146 1.996 H60 YO2 60 YO2 H62 H23 H 0 1 N N N N N N -10.432 10.733 43.675 -4.841 -2.699 2.149 H62 YO2 61 YO2 H61 H24 H 0 1 N N N N N N -9.952 10.688 41.945 -6.368 -2.808 3.058 H61 YO2 62 YO2 H63 H25 H 0 1 N N N N N N -12.735 11.986 40.766 -8.581 -2.461 0.085 H63 YO2 63 YO2 H65 H26 H 0 1 N N N N N N -11.721 10.641 40.141 -8.050 -4.007 0.790 H65 YO2 64 YO2 H64 H27 H 0 1 N N N N N N -13.428 10.336 40.611 -8.552 -2.669 1.852 H64 YO2 65 YO2 H66 H28 H 0 1 N N N N N N -13.220 4.130 45.986 -3.788 5.033 0.766 H66 YO2 66 YO2 H67 H29 H 0 1 N N N N N N -14.498 3.969 44.735 -2.704 3.859 -0.019 H67 YO2 67 YO2 H68 H30 H 0 1 N N N N N N -13.426 1.779 45.211 -4.116 3.917 -2.056 H68 YO2 68 YO2 H70 H31 H 0 1 N N N N N N -13.100 2.297 43.522 -5.200 5.091 -1.271 H70 YO2 69 YO2 H69 H32 H 0 1 N N N N N N -11.821 2.458 44.774 -3.520 5.543 -1.646 H69 YO2 70 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YO2 N1 C2 SING N N 1 YO2 N1 C5 SING N N 2 YO2 N1 C15 SING N N 3 YO2 C2 C3 SING N N 4 YO2 C3 C4 SING N N 5 YO2 C3 C6 SING N N 6 YO2 C4 C5 SING N N 7 YO2 C4 C7 SING N N 8 YO2 C6 C7 SING N N 9 YO2 C6 C8 SING N N 10 YO2 C7 C10 SING N N 11 YO2 C8 N9 SING N N 12 YO2 N9 C10 SING N N 13 YO2 N9 C17 SING N N 14 YO2 C15 O16 DOUB N N 15 YO2 C15 C28 SING N N 16 YO2 C17 C18 SING N N 17 YO2 C17 O19 DOUB N N 18 YO2 C18 C20 DOUB Y N 19 YO2 C18 C22 SING Y N 20 YO2 C20 C21 SING Y N 21 YO2 C21 C24 DOUB Y N 22 YO2 C22 C23 DOUB Y N 23 YO2 C23 C24 SING Y N 24 YO2 C23 N27 SING Y N 25 YO2 C24 N25 SING Y N 26 YO2 N25 N26 SING Y N 27 YO2 N26 N27 DOUB Y N 28 YO2 C28 C29 DOUB Y N 29 YO2 C28 C30 SING Y N 30 YO2 C29 C35 SING Y N 31 YO2 C30 C31 DOUB Y N 32 YO2 C31 C34 SING Y N 33 YO2 C31 O32 SING N N 34 YO2 O32 C33 SING N N 35 YO2 C33 C39 SING N N 36 YO2 C33 C40 SING N N 37 YO2 C34 C35 DOUB Y N 38 YO2 C34 C38 SING Y N 39 YO2 C35 N36 SING Y N 40 YO2 N36 C37 SING Y N 41 YO2 N36 C41 SING N N 42 YO2 C37 C38 DOUB Y N 43 YO2 C41 C42 SING N N 44 YO2 C10 H49 SING N N 45 YO2 C10 H50 SING N N 46 YO2 C20 H51 SING N N 47 YO2 C21 H52 SING N N 48 YO2 C22 H53 SING N N 49 YO2 C2 H44 SING N N 50 YO2 C2 H43 SING N N 51 YO2 C3 H12 SING N N 52 YO2 C4 H11 SING N N 53 YO2 C5 H45 SING N N 54 YO2 C5 H46 SING N N 55 YO2 C6 H14 SING N N 56 YO2 C7 H13 SING N N 57 YO2 C8 H48 SING N N 58 YO2 C8 H47 SING N N 59 YO2 N25 H54 SING N N 60 YO2 C29 H55 SING N N 61 YO2 C30 H56 SING N N 62 YO2 C33 H57 SING N N 63 YO2 C37 H58 SING N N 64 YO2 C38 H59 SING N N 65 YO2 C39 H60 SING N N 66 YO2 C39 H62 SING N N 67 YO2 C39 H61 SING N N 68 YO2 C40 H63 SING N N 69 YO2 C40 H65 SING N N 70 YO2 C40 H64 SING N N 71 YO2 C41 H66 SING N N 72 YO2 C41 H67 SING N N 73 YO2 C42 H68 SING N N 74 YO2 C42 H70 SING N N 75 YO2 C42 H69 SING N N 76 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YO2 SMILES ACDLabs 12.01 "CC(C)Oc1cc(cc2n(CC)ccc21)C(=O)N1CC2C3CN(CC3C2C1)C(=O)c1cc2nn[NH]c2cc1" YO2 InChI InChI 1.06 "InChI=1S/C29H32N6O3/c1-4-33-8-7-19-26(33)10-18(11-27(19)38-16(2)3)29(37)35-14-22-20-12-34(13-21(20)23(22)15-35)28(36)17-5-6-24-25(9-17)31-32-30-24/h5-11,16,20-23H,4,12-15H2,1-3H3,(H,30,31,32)" YO2 InChIKey InChI 1.06 ILIIVOLVKCQDFT-UHFFFAOYSA-N YO2 SMILES_CANONICAL CACTVS 3.385 "CCn1ccc2c(OC(C)C)cc(cc12)C(=O)N3C[C@H]4[C@@H]5CN(C[C@@H]5[C@H]4C3)C(=O)c6ccc7[nH]nnc7c6" YO2 SMILES CACTVS 3.385 "CCn1ccc2c(OC(C)C)cc(cc12)C(=O)N3C[CH]4[CH]5CN(C[CH]5[CH]4C3)C(=O)c6ccc7[nH]nnc7c6" YO2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCn1ccc2c1cc(cc2OC(C)C)C(=O)N3C[C@H]4[C@@H]5CN(C[C@@H]5[C@H]4C3)C(=O)c6ccc7c(c6)nn[nH]7" YO2 SMILES "OpenEye OEToolkits" 2.0.7 "CCn1ccc2c1cc(cc2OC(C)C)C(=O)N3CC4C5CN(CC5C4C3)C(=O)c6ccc7c(c6)nn[nH]7" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YO2 "SYSTEMATIC NAME" ACDLabs 12.01 "[(3aR,3bS,6aR,6bS)-5-(1H-benzotriazole-5-carbonyl)octahydrocyclobuta[1,2-c:3,4-c']dipyrrol-2(1H)-yl]{1-ethyl-4-[(propan-2-yl)oxy]-1H-indol-6-yl}methanone" YO2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1~{H}-benzotriazol-5-yl-[(1~{R},2~{R},6~{S},7~{S})-9-(1-ethyl-4-propan-2-yloxy-indol-6-yl)carbonyl-4,9-diazatricyclo[5.3.0.0^{2,6}]decan-4-yl]methanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YO2 "Create component" 2023-06-19 RCSB YO2 "Initial release" 2024-12-18 RCSB #