data_YOQ # _chem_comp.id YOQ _chem_comp.name "[3-chloro-5-(methanesulfonyl)phenyl]methyl 2-(1H-benzotriazole-5-carbonyl)-2,7-diazaspiro[3.5]nonane-7-carboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H24 Cl N5 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-19 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 517.985 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YOQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G4A _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YOQ C01 C1 C 0 1 Y N N N N N 10.920 5.957 -43.194 6.624 -1.338 -0.504 C01 YOQ 1 YOQ C02 C2 C 0 1 Y N N N N N 11.254 7.253 -43.559 5.710 -2.242 0.006 C02 YOQ 2 YOQ C04 C3 C 0 1 Y N N N N N 12.687 6.397 -45.295 4.549 -0.452 1.094 C04 YOQ 3 YOQ C05 C4 C 0 1 Y N N N N N 12.362 5.101 -44.937 5.463 0.451 0.584 C05 YOQ 4 YOQ C06 C5 C 0 1 Y N N N N N 11.468 4.891 -43.886 6.500 0.008 -0.215 C06 YOQ 5 YOQ C17 C6 C 0 1 N N N N N N 14.604 10.695 -49.069 -1.139 1.611 1.730 C17 YOQ 6 YOQ C18 C7 C 0 1 N N N N N N 13.893 10.420 -50.400 -2.320 0.714 1.342 C18 YOQ 7 YOQ C19 C8 C 0 1 N N N N N N 12.404 10.809 -50.292 -2.394 0.615 -0.180 C19 YOQ 8 YOQ C20 C9 C 0 1 N N N N N N 11.755 10.167 -49.038 -1.112 0.077 -0.810 C20 YOQ 9 YOQ C21 C10 C 0 1 N N N N N N 12.566 10.456 -47.763 0.062 0.979 -0.408 C21 YOQ 10 YOQ C22 C11 C 0 1 N N N N N N 11.606 10.607 -51.624 -2.922 1.889 -0.854 C22 YOQ 11 YOQ C23 C12 C 0 1 N N N N N N 12.131 12.332 -50.426 -3.667 -0.076 -0.690 C23 YOQ 12 YOQ C25 C13 C 0 1 N N N N N N 10.228 12.755 -52.132 -5.517 1.757 -0.677 C25 YOQ 13 YOQ C26 C14 C 0 1 Y N N N N N 9.031 12.317 -52.877 -6.654 0.833 -0.485 C26 YOQ 14 YOQ C28 C15 C 0 1 Y N N N N N 8.849 10.944 -53.269 -7.940 1.345 -0.262 C28 YOQ 15 YOQ C03 C16 C 0 1 Y N N N N N 12.146 7.470 -44.608 4.672 -1.798 0.806 C03 YOQ 16 YOQ CL07 CL1 CL 0 0 N N N N N N 10.543 8.595 -42.696 5.865 -3.932 -0.357 CL07 YOQ 17 YOQ S08 S1 S 0 1 N N N N N N 11.016 3.263 -43.386 7.665 1.160 -0.865 S08 YOQ 18 YOQ C09 C17 C 0 1 N N N N N N 9.714 2.754 -44.481 6.958 1.669 -2.457 C09 YOQ 19 YOQ O10 O1 O 0 1 N N N N N N 12.142 2.348 -43.614 7.643 2.240 0.058 O10 YOQ 20 YOQ O11 O2 O 0 1 N N N N N N 10.495 3.345 -42.038 8.843 0.391 -1.066 O11 YOQ 21 YOQ C12 C18 C 0 1 N N N N N N 13.645 6.666 -46.405 3.419 0.032 1.966 C12 YOQ 22 YOQ O13 O3 O 0 1 N N N N N N 13.330 7.951 -46.950 2.271 0.353 1.137 O13 YOQ 23 YOQ C14 C19 C 0 1 N N N N N N 14.285 8.643 -47.655 1.169 0.803 1.765 C14 YOQ 24 YOQ N15 N1 N 0 1 N N N N N N 13.941 9.951 -47.975 0.069 1.120 1.054 N15 YOQ 25 YOQ O16 O4 O 0 1 N N N N N N 15.358 8.122 -48.000 1.166 0.923 2.975 O16 YOQ 26 YOQ N24 N2 N 0 1 N N N N N N 11.007 11.937 -51.334 -4.259 1.276 -0.731 N24 YOQ 27 YOQ O27 O5 O 0 1 N N N N N N 10.582 13.936 -52.135 -5.716 2.951 -0.787 O27 YOQ 28 YOQ C29 C20 C 0 1 Y N N N N N 7.733 10.542 -53.972 -8.997 0.504 -0.083 C29 YOQ 29 YOQ C30 C21 C 0 1 Y N N N N N 8.073 13.265 -53.241 -6.445 -0.540 -0.533 C30 YOQ 30 YOQ C31 C22 C 0 1 Y N N N N N 6.930 12.870 -53.968 -7.525 -1.408 -0.350 C31 YOQ 31 YOQ C32 C23 C 0 1 Y N N N N N 6.784 11.541 -54.313 -8.807 -0.876 -0.121 C32 YOQ 32 YOQ N33 N3 N 0 1 Y N N N N N 5.582 11.456 -55.014 -9.647 -1.953 0.020 N33 YOQ 33 YOQ N34 N4 N 0 1 Y N N N N N 5.109 12.769 -55.024 -8.855 -3.101 -0.121 N34 YOQ 34 YOQ N35 N5 N 0 1 Y N N N N N 5.903 13.611 -54.400 -7.635 -2.758 -0.342 N35 YOQ 35 YOQ H36 H1 H 0 1 N N N N N N 10.237 5.781 -42.376 7.438 -1.684 -1.125 H36 YOQ 36 YOQ H38 H2 H 0 1 N N N N N N 12.794 4.263 -45.464 5.366 1.503 0.809 H38 YOQ 37 YOQ H45 H3 H 0 1 N N N N N N 14.565 11.773 -48.852 -1.340 2.636 1.418 H45 YOQ 38 YOQ H44 H4 H 0 1 N N N N N N 15.653 10.374 -49.144 -0.995 1.579 2.810 H44 YOQ 39 YOQ H46 H5 H 0 1 N N N N N N 14.368 11.013 -51.196 -2.178 -0.280 1.765 H46 YOQ 40 YOQ H47 H6 H 0 1 N N N N N N 13.973 9.350 -50.642 -3.246 1.145 1.724 H47 YOQ 41 YOQ H49 H7 H 0 1 N N N N N N 10.741 10.574 -48.914 -0.930 -0.938 -0.456 H49 YOQ 42 YOQ H48 H8 H 0 1 N N N N N N 11.698 9.078 -49.185 -1.213 0.073 -1.895 H48 YOQ 43 YOQ H51 H9 H 0 1 N N N N N N 12.108 9.944 -46.904 0.998 0.528 -0.737 H51 YOQ 44 YOQ H50 H10 H 0 1 N N N N N N 12.591 11.539 -47.573 -0.055 1.958 -0.871 H50 YOQ 45 YOQ H52 H11 H 0 1 N N N N N N 12.222 10.562 -52.534 -2.794 2.789 -0.252 H52 YOQ 46 YOQ H53 H12 H 0 1 N N N N N N 10.897 9.766 -51.619 -2.588 2.013 -1.884 H53 YOQ 47 YOQ H55 H13 H 0 1 N N N N N N 11.824 12.833 -49.496 -3.553 -0.537 -1.671 H55 YOQ 48 YOQ H54 H14 H 0 1 N N N N N N 12.936 12.909 -50.905 -4.131 -0.738 0.041 H54 YOQ 49 YOQ H56 H15 H 0 1 N N N N N N 9.601 10.215 -53.007 -8.093 2.414 -0.230 H56 YOQ 50 YOQ H37 H16 H 0 1 N N N N N N 12.416 8.478 -44.886 3.958 -2.503 1.205 H37 YOQ 51 YOQ H41 H17 H 0 1 N N N N N N 9.388 1.737 -44.216 5.983 2.126 -2.292 H41 YOQ 52 YOQ H40 H18 H 0 1 N N N N N N 8.865 3.447 -44.388 7.621 2.390 -2.935 H40 YOQ 53 YOQ H39 H19 H 0 1 N N N N N N 10.082 2.762 -45.517 6.846 0.796 -3.100 H39 YOQ 54 YOQ H43 H20 H 0 1 N N N N N N 14.675 6.665 -46.019 3.147 -0.750 2.675 H43 YOQ 55 YOQ H42 H21 H 0 1 N N N N N N 13.544 5.894 -47.182 3.735 0.922 2.510 H42 YOQ 56 YOQ H57 H22 H 0 1 N N N N N N 7.587 9.509 -54.252 -9.984 0.908 0.089 H57 YOQ 57 YOQ H58 H23 H 0 1 N N N N N N 8.207 14.301 -52.966 -5.455 -0.933 -0.710 H58 YOQ 58 YOQ H59 H24 H 0 1 N N N N N N 5.158 10.644 -55.416 -10.602 -1.925 0.185 H59 YOQ 59 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YOQ C01 C02 DOUB Y N 1 YOQ C01 C06 SING Y N 2 YOQ C02 C03 SING Y N 3 YOQ C02 CL07 SING N N 4 YOQ C03 C04 DOUB Y N 5 YOQ C04 C05 SING Y N 6 YOQ C04 C12 SING N N 7 YOQ C05 C06 DOUB Y N 8 YOQ C06 S08 SING N N 9 YOQ S08 C09 SING N N 10 YOQ S08 O10 DOUB N N 11 YOQ S08 O11 DOUB N N 12 YOQ C12 O13 SING N N 13 YOQ O13 C14 SING N N 14 YOQ C14 N15 SING N N 15 YOQ C14 O16 DOUB N N 16 YOQ N15 C17 SING N N 17 YOQ N15 C21 SING N N 18 YOQ C17 C18 SING N N 19 YOQ C18 C19 SING N N 20 YOQ C19 C20 SING N N 21 YOQ C19 C22 SING N N 22 YOQ C19 C23 SING N N 23 YOQ C20 C21 SING N N 24 YOQ C22 N24 SING N N 25 YOQ C23 N24 SING N N 26 YOQ N24 C25 SING N N 27 YOQ C25 C26 SING N N 28 YOQ C25 O27 DOUB N N 29 YOQ C26 C28 DOUB Y N 30 YOQ C26 C30 SING Y N 31 YOQ C28 C29 SING Y N 32 YOQ C29 C32 DOUB Y N 33 YOQ C30 C31 DOUB Y N 34 YOQ C31 C32 SING Y N 35 YOQ C31 N35 SING Y N 36 YOQ C32 N33 SING Y N 37 YOQ N33 N34 SING Y N 38 YOQ N34 N35 DOUB Y N 39 YOQ C01 H36 SING N N 40 YOQ C05 H38 SING N N 41 YOQ C17 H45 SING N N 42 YOQ C17 H44 SING N N 43 YOQ C18 H46 SING N N 44 YOQ C18 H47 SING N N 45 YOQ C20 H49 SING N N 46 YOQ C20 H48 SING N N 47 YOQ C21 H51 SING N N 48 YOQ C21 H50 SING N N 49 YOQ C22 H52 SING N N 50 YOQ C22 H53 SING N N 51 YOQ C23 H55 SING N N 52 YOQ C23 H54 SING N N 53 YOQ C28 H56 SING N N 54 YOQ C03 H37 SING N N 55 YOQ C09 H41 SING N N 56 YOQ C09 H40 SING N N 57 YOQ C09 H39 SING N N 58 YOQ C12 H43 SING N N 59 YOQ C12 H42 SING N N 60 YOQ C29 H57 SING N N 61 YOQ C30 H58 SING N N 62 YOQ N33 H59 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YOQ SMILES ACDLabs 12.01 "CS(=O)(=O)c1cc(cc(Cl)c1)COC(=O)N1CCC2(CC1)CN(C2)C(=O)c1cc2nn[NH]c2cc1" YOQ InChI InChI 1.06 "InChI=1S/C23H24ClN5O5S/c1-35(32,33)18-9-15(8-17(24)11-18)12-34-22(31)28-6-4-23(5-7-28)13-29(14-23)21(30)16-2-3-19-20(10-16)26-27-25-19/h2-3,8-11H,4-7,12-14H2,1H3,(H,25,26,27)" YOQ InChIKey InChI 1.06 KJIYUARBMWVZFP-UHFFFAOYSA-N YOQ SMILES_CANONICAL CACTVS 3.385 "C[S](=O)(=O)c1cc(Cl)cc(COC(=O)N2CCC3(CC2)CN(C3)C(=O)c4ccc5[nH]nnc5c4)c1" YOQ SMILES CACTVS 3.385 "C[S](=O)(=O)c1cc(Cl)cc(COC(=O)N2CCC3(CC2)CN(C3)C(=O)c4ccc5[nH]nnc5c4)c1" YOQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CS(=O)(=O)c1cc(cc(c1)Cl)COC(=O)N2CCC3(CC2)CN(C3)C(=O)c4ccc5c(c4)nn[nH]5" YOQ SMILES "OpenEye OEToolkits" 2.0.7 "CS(=O)(=O)c1cc(cc(c1)Cl)COC(=O)N2CCC3(CC2)CN(C3)C(=O)c4ccc5c(c4)nn[nH]5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YOQ "SYSTEMATIC NAME" ACDLabs 12.01 "[3-chloro-5-(methanesulfonyl)phenyl]methyl 2-(1H-benzotriazole-5-carbonyl)-2,7-diazaspiro[3.5]nonane-7-carboxylate" YOQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3-chloranyl-5-methylsulfonyl-phenyl)methyl 2-(1~{H}-benzotriazol-5-ylcarbonyl)-2,7-diazaspiro[3.5]nonane-7-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YOQ "Create component" 2023-06-19 RCSB YOQ "Initial release" 2024-12-18 RCSB #