data_YP3 # _chem_comp.id YP3 _chem_comp.name "5-bromo-2-hydroxy-N-[(quinolin-6-yl)methyl]benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H13 Br N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-02-15 _chem_comp.pdbx_modified_date 2024-02-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 357.201 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YP3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7FTV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YP3 C10 C1 C 0 1 Y N N N N N 10.306 12.846 25.678 6.043 1.435 -1.506 C10 YP3 1 YP3 C11 C2 C 0 1 Y N N N N N 8.888 12.736 25.877 6.416 1.749 -0.201 C11 YP3 2 YP3 C13 C3 C 0 1 N N N N N N 11.726 13.100 19.074 -0.961 -2.149 -0.025 C13 YP3 3 YP3 C15 C4 C 0 1 Y N N N N N 13.550 14.750 18.564 -2.186 0.018 0.021 C15 YP3 4 YP3 C16 C5 C 0 1 Y N N N N N 14.891 14.992 18.446 -3.363 0.736 -0.029 C16 YP3 5 YP3 C17 C6 C 0 1 Y N N N N N 15.873 14.041 18.603 -4.575 0.080 -0.172 C17 YP3 6 YP3 C18 C7 C 0 1 Y N N N N N 15.493 12.737 18.917 -4.618 -1.297 -0.266 C18 YP3 7 YP3 C19 C8 C 0 1 Y N N N N N 14.101 12.459 19.072 -3.445 -2.034 -0.218 C19 YP3 8 YP3 C14 C9 C 0 1 Y N N N N N 13.136 13.454 18.888 -2.216 -1.375 -0.078 C14 YP3 9 YP3 C2 C10 C 0 1 N N N N N N 9.892 11.450 19.546 1.464 -2.281 0.172 C2 YP3 10 YP3 C3 C11 C 0 1 Y N N N N N 9.457 11.712 21.005 2.629 -1.339 0.336 C3 YP3 11 YP3 C4 C12 C 0 1 Y N N N N N 8.058 11.624 21.335 3.058 -0.994 1.616 C4 YP3 12 YP3 C5 C13 C 0 1 Y N N N N N 7.606 11.864 22.613 4.107 -0.146 1.800 C5 YP3 13 YP3 C6 C14 C 0 1 Y N N N N N 8.524 12.196 23.647 4.772 0.393 0.685 C6 YP3 14 YP3 C7 C15 C 0 1 Y N N N N N 9.905 12.278 23.351 4.334 0.040 -0.615 C7 YP3 15 YP3 C8 C16 C 0 1 Y N N N N N 10.362 12.027 22.022 3.249 -0.838 -0.767 C8 YP3 16 YP3 C9 C17 C 0 1 Y N N N N N 10.799 12.614 24.419 5.002 0.580 -1.730 C9 YP3 17 YP3 N1 N1 N 0 1 N N N N N N 11.332 11.811 19.315 0.218 -1.513 0.119 N1 YP3 18 YP3 N12 N2 N 0 1 Y N N N N N 8.016 12.426 24.920 5.795 1.240 0.835 N12 YP3 19 YP3 O20 O1 O 0 1 N N N N N N 13.773 11.211 19.369 -3.486 -3.387 -0.309 O20 YP3 20 YP3 O22 O2 O 0 1 N N N N N N 10.916 14.024 19.081 -0.990 -3.362 -0.112 O22 YP3 21 YP3 BR21 BR1 BR 0 0 N N N N N N 15.372 16.776 17.964 -3.321 2.622 0.099 BR21 YP3 22 YP3 H30 H1 H 0 1 N N N N N N 10.964 13.104 26.495 6.573 1.871 -2.340 H30 YP3 23 YP3 H31 H2 H 0 1 N N N N N N 8.503 12.917 26.870 7.239 2.430 -0.038 H31 YP3 24 YP3 H32 H3 H 0 1 N N N N N N 12.829 15.540 18.411 -1.243 0.532 0.133 H32 YP3 25 YP3 H33 H4 H 0 1 N N N N N N 16.915 14.299 18.486 -5.492 0.650 -0.210 H33 YP3 26 YP3 H34 H5 H 0 1 N N N N N N 16.231 11.958 19.040 -5.567 -1.800 -0.378 H34 YP3 27 YP3 H24 H6 H 0 1 N N N N N N 9.263 12.052 18.874 1.582 -2.846 -0.753 H24 YP3 28 YP3 H25 H7 H 0 1 N N N N N N 9.753 10.382 19.320 1.431 -2.970 1.016 H25 YP3 29 YP3 H26 H8 H 0 1 N N N N N N 7.348 11.364 20.563 2.550 -1.405 2.476 H26 YP3 30 YP3 H27 H9 H 0 1 N N N N N N 6.550 11.800 22.831 4.426 0.112 2.799 H27 YP3 31 YP3 H28 H10 H 0 1 N N N N N N 11.418 12.081 21.800 2.908 -1.114 -1.754 H28 YP3 32 YP3 H29 H11 H 0 1 N N N N N N 11.861 12.685 24.233 4.699 0.326 -2.736 H29 YP3 33 YP3 H23 H12 H 0 1 N N N N N N 12.023 11.089 19.338 0.242 -0.545 0.189 H23 YP3 34 YP3 H35 H13 H 0 1 N N N N N N 14.561 10.688 19.454 -3.426 -3.722 -1.214 H35 YP3 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YP3 N1 C2 SING N N 1 YP3 N1 C13 SING N N 2 YP3 C2 C3 SING N N 3 YP3 C3 C4 DOUB Y N 4 YP3 C3 C8 SING Y N 5 YP3 C4 C5 SING Y N 6 YP3 C5 C6 DOUB Y N 7 YP3 C6 C7 SING Y N 8 YP3 C6 N12 SING Y N 9 YP3 C7 C8 DOUB Y N 10 YP3 C7 C9 SING Y N 11 YP3 C9 C10 DOUB Y N 12 YP3 C10 C11 SING Y N 13 YP3 C11 N12 DOUB Y N 14 YP3 C13 C14 SING N N 15 YP3 C13 O22 DOUB N N 16 YP3 C14 C15 DOUB Y N 17 YP3 C14 C19 SING Y N 18 YP3 C15 C16 SING Y N 19 YP3 C16 C17 DOUB Y N 20 YP3 C16 BR21 SING N N 21 YP3 C17 C18 SING Y N 22 YP3 C18 C19 DOUB Y N 23 YP3 C19 O20 SING N N 24 YP3 C10 H30 SING N N 25 YP3 C11 H31 SING N N 26 YP3 C15 H32 SING N N 27 YP3 C17 H33 SING N N 28 YP3 C18 H34 SING N N 29 YP3 C2 H24 SING N N 30 YP3 C2 H25 SING N N 31 YP3 C4 H26 SING N N 32 YP3 C5 H27 SING N N 33 YP3 C8 H28 SING N N 34 YP3 C9 H29 SING N N 35 YP3 N1 H23 SING N N 36 YP3 O20 H35 SING N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YP3 SMILES ACDLabs 12.01 "Brc1cc(c(O)cc1)C(=O)NCc1ccc2ncccc2c1" YP3 InChI InChI 1.06 "InChI=1S/C17H13BrN2O2/c18-13-4-6-16(21)14(9-13)17(22)20-10-11-3-5-15-12(8-11)2-1-7-19-15/h1-9,21H,10H2,(H,20,22)" YP3 InChIKey InChI 1.06 YSZSLARXPSZHMQ-UHFFFAOYSA-N YP3 SMILES_CANONICAL CACTVS 3.385 "Oc1ccc(Br)cc1C(=O)NCc2ccc3ncccc3c2" YP3 SMILES CACTVS 3.385 "Oc1ccc(Br)cc1C(=O)NCc2ccc3ncccc3c2" YP3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2cc(ccc2nc1)CNC(=O)c3cc(ccc3O)Br" YP3 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2cc(ccc2nc1)CNC(=O)c3cc(ccc3O)Br" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YP3 "SYSTEMATIC NAME" ACDLabs 12.01 "5-bromo-2-hydroxy-N-[(quinolin-6-yl)methyl]benzamide" YP3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-bromanyl-2-oxidanyl-~{N}-(quinolin-6-ylmethyl)benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YP3 "Create component" 2023-02-15 RCSB YP3 "Initial release" 2024-02-21 RCSB #