data_YQO # _chem_comp.id YQO _chem_comp.name "(5S)-3-(2,4-dichlorophenyl)-1-oxa-2,9-diazaspiro[4.5]dec-2-ene-8,10-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H10 Cl2 N2 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-12-11 _chem_comp.pdbx_modified_date 2024-04-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 313.136 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YQO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8RDQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YQO C12 C1 C 0 1 Y N N N N N 21.884 18.146 30.432 -2.331 -0.896 0.051 C12 YQO 1 YQO O1 O1 O 0 1 N N N N N N 22.804 11.120 25.483 6.219 0.343 0.625 O1 YQO 2 YQO C13 C2 C 0 1 N N N N N N 22.624 14.555 26.277 2.796 0.601 0.870 C13 YQO 3 YQO O2 O2 O 0 1 N N N N N N 24.216 15.989 27.549 1.959 -1.166 -0.552 O2 YQO 4 YQO O3 O3 O 0 1 N N N N N N 22.013 15.507 25.852 1.980 0.903 1.714 O3 YQO 5 YQO C7 C3 C 0 1 Y N N N N N 21.793 16.779 30.093 -1.475 0.149 -0.304 C7 YQO 6 YQO C8 C4 C 0 1 Y N N N N N 20.839 16.002 30.747 -1.991 1.432 -0.499 C8 YQO 7 YQO C9 C5 C 0 1 Y N N N N N 19.996 16.550 31.695 -3.342 1.659 -0.342 C9 YQO 8 YQO C10 C6 C 0 1 Y N N N N N 20.100 17.891 31.995 -4.187 0.619 0.010 C10 YQO 9 YQO C11 C7 C 0 1 Y N N N N N 21.035 18.706 31.375 -3.682 -0.655 0.205 C11 YQO 10 YQO N1 N1 N 0 1 N N N N N N 22.486 13.328 25.689 4.104 0.611 1.181 N1 YQO 11 YQO C1 C8 C 0 1 N N N N N N 23.100 12.153 26.042 5.055 0.287 0.292 C1 YQO 12 YQO N2 N2 N 0 1 N N N N N N 23.590 16.822 28.505 0.564 -1.238 -0.318 N2 YQO 13 YQO C2 C9 C 0 1 N N N N N N 24.099 12.209 27.159 4.713 -0.146 -1.109 C2 YQO 14 YQO C3 C10 C 0 1 N N N N N N 24.608 13.612 27.481 3.404 0.524 -1.541 C3 YQO 15 YQO C4 C11 C 0 1 N N S N N N 23.525 14.685 27.498 2.332 0.217 -0.501 C4 YQO 16 YQO C5 C12 C 0 1 N N N N N N 22.667 14.696 28.762 1.015 0.934 -0.850 C5 YQO 17 YQO C6 C13 C 0 1 N N N N N N 22.685 16.157 29.108 -0.030 -0.101 -0.470 C6 YQO 18 YQO CL2 CL1 CL 0 0 N N N N N N 23.037 19.200 29.677 -1.700 -2.496 0.289 CL2 YQO 19 YQO CL1 CL2 CL 0 0 N N N N N N 19.030 18.576 33.180 -5.886 0.915 0.207 CL1 YQO 20 YQO H1 H1 H 0 1 N N N N N N 20.757 14.952 30.509 -1.334 2.244 -0.773 H1 YQO 21 YQO H2 H2 H 0 1 N N N N N N 19.264 15.934 32.195 -3.742 2.651 -0.493 H2 YQO 22 YQO H3 H3 H 0 1 N N N N N N 21.101 19.755 31.621 -4.346 -1.462 0.479 H3 YQO 23 YQO H4 H4 H 0 1 N N N N N N 21.863 13.282 24.908 4.370 0.863 2.079 H4 YQO 24 YQO H6 H6 H 0 1 N N N N N N 23.627 11.798 28.064 5.514 0.150 -1.786 H6 YQO 25 YQO H7 H7 H 0 1 N N N N N N 24.962 11.586 26.881 4.594 -1.229 -1.137 H7 YQO 26 YQO H8 H8 H 0 1 N N N N N N 25.083 13.587 28.473 3.549 1.602 -1.608 H8 YQO 27 YQO H9 H9 H 0 1 N N N N N N 25.356 13.889 26.723 3.095 0.133 -2.511 H9 YQO 28 YQO H10 H10 H 0 1 N N N N N N 21.646 14.341 28.560 0.897 1.839 -0.255 H10 YQO 29 YQO H11 H11 H 0 1 N N N N N N 23.116 14.086 29.560 0.966 1.160 -1.915 H11 YQO 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YQO O1 C1 DOUB N N 1 YQO N1 C1 SING N N 2 YQO N1 C13 SING N N 3 YQO O3 C13 DOUB N N 4 YQO C1 C2 SING N N 5 YQO C13 C4 SING N N 6 YQO C2 C3 SING N N 7 YQO C3 C4 SING N N 8 YQO C4 O2 SING N N 9 YQO C4 C5 SING N N 10 YQO O2 N2 SING N N 11 YQO N2 C6 DOUB N N 12 YQO C5 C6 SING N N 13 YQO C6 C7 SING N N 14 YQO CL2 C12 SING N N 15 YQO C7 C12 DOUB Y N 16 YQO C7 C8 SING Y N 17 YQO C12 C11 SING Y N 18 YQO C8 C9 DOUB Y N 19 YQO C11 C10 DOUB Y N 20 YQO C9 C10 SING Y N 21 YQO C10 CL1 SING N N 22 YQO C8 H1 SING N N 23 YQO C9 H2 SING N N 24 YQO C11 H3 SING N N 25 YQO N1 H4 SING N N 26 YQO C2 H6 SING N N 27 YQO C2 H7 SING N N 28 YQO C3 H8 SING N N 29 YQO C3 H9 SING N N 30 YQO C5 H10 SING N N 31 YQO C5 H11 SING N N 32 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YQO InChI InChI 1.06 "InChI=1S/C13H10Cl2N2O3/c14-7-1-2-8(9(15)5-7)10-6-13(20-17-10)4-3-11(18)16-12(13)19/h1-2,5H,3-4,6H2,(H,16,18,19)/t13-/m0/s1" YQO InChIKey InChI 1.06 KFAVXUHSPFYSLI-ZDUSSCGKSA-N YQO SMILES_CANONICAL CACTVS 3.385 "Clc1ccc(c(Cl)c1)C2=NO[C@@]3(CCC(=O)NC3=O)C2" YQO SMILES CACTVS 3.385 "Clc1ccc(c(Cl)c1)C2=NO[C]3(CCC(=O)NC3=O)C2" YQO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1Cl)Cl)C2=NO[C@]3(C2)CCC(=O)NC3=O" YQO SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1Cl)Cl)C2=NOC3(C2)CCC(=O)NC3=O" # _pdbx_chem_comp_identifier.comp_id YQO _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(5~{S})-3-(2,4-dichlorophenyl)-1-oxa-2,9-diazaspiro[4.5]dec-2-ene-8,10-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YQO "Create component" 2023-12-11 PDBE YQO "Modify aromatic_flag" 2024-01-16 PDBE YQO "Initial release" 2024-04-10 RCSB #