data_YQU # _chem_comp.id YQU _chem_comp.name "(5M)-5-(2-chloro-4-methylphenyl)-1-(2-phenylethyl)-1H-benzimidazole-7-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H19 Cl N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-02-15 _chem_comp.pdbx_modified_date 2024-02-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 390.862 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YQU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7FUK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YQU C11 C1 C 0 1 N N N N N N 11.684 -12.440 -18.812 -3.016 -1.175 0.299 C11 YQU 1 YQU C13 C2 C 0 1 Y N N N N N 10.886 -11.520 -21.010 -4.943 0.179 -0.476 C13 YQU 2 YQU C15 C3 C 0 1 Y N N N N N 11.552 -10.245 -22.942 -6.348 1.843 0.518 C15 YQU 3 YQU C16 C4 C 0 1 Y N N N N N 10.678 -9.242 -22.595 -7.465 1.099 0.186 C16 YQU 4 YQU C17 C5 C 0 1 Y N N N N N 9.906 -9.370 -21.461 -7.321 -0.105 -0.477 C17 YQU 5 YQU C18 C6 C 0 1 Y N N N N N 10.007 -10.503 -20.675 -6.060 -0.565 -0.808 C18 YQU 6 YQU C19 C7 C 0 1 Y N N N N N 12.905 -14.380 -17.758 -1.364 -2.916 -0.476 C19 YQU 7 YQU C21 C8 C 0 1 Y N N N N N 8.406 -17.213 -15.183 3.519 0.449 -0.275 C21 YQU 8 YQU C22 C9 C 0 1 Y N N N N N 8.180 -18.515 -15.665 4.548 -0.285 0.314 C22 YQU 9 YQU C23 C10 C 0 1 Y N N N N N 7.410 -19.423 -14.969 5.851 0.165 0.227 C23 YQU 10 YQU C24 C11 C 0 1 Y N N N N N 6.863 -19.087 -13.741 6.136 1.340 -0.444 C24 YQU 11 YQU C25 C12 C 0 1 Y N N N N N 7.080 -17.801 -13.251 5.119 2.072 -1.030 C25 YQU 12 YQU C26 C13 C 0 1 Y N N N N N 7.839 -16.875 -13.955 3.813 1.633 -0.950 C26 YQU 13 YQU C27 C14 C 0 1 N N N N N N 6.054 -20.090 -12.959 7.560 1.827 -0.535 C27 YQU 14 YQU C1 C15 C 0 1 Y N N N N N 8.601 -15.104 -16.534 1.113 0.837 0.231 C1 YQU 15 YQU C12 C16 C 0 1 N N N N N N 11.005 -12.746 -20.145 -3.569 -0.320 -0.842 C12 YQU 16 YQU C14 C17 C 0 1 Y N N N N N 11.661 -11.376 -22.151 -5.088 1.383 0.187 C14 YQU 17 YQU C2 C18 C 0 1 Y N N N N N 9.208 -16.208 -15.933 2.118 -0.031 -0.191 C2 YQU 18 YQU C3 C19 C 0 1 Y N N N N N 10.582 -16.374 -16.070 1.817 -1.344 -0.533 C3 YQU 19 YQU C4 C20 C 0 1 Y N N N N N 11.349 -15.457 -16.778 0.501 -1.802 -0.455 C4 YQU 20 YQU C5 C21 C 0 1 Y N N N N N 10.744 -14.348 -17.379 -0.515 -0.930 -0.030 C5 YQU 21 YQU C6 C22 C 0 1 Y N N N N N 9.347 -14.175 -17.261 -0.205 0.394 0.314 C6 YQU 22 YQU C7 C23 C 0 1 N N N N N N 8.506 -13.042 -17.782 -1.268 1.313 0.761 C7 YQU 23 YQU N10 N1 N 0 1 Y N N N N N 11.777 -13.644 -17.989 -1.680 -1.660 -0.057 N10 YQU 24 YQU N20 N2 N 0 1 Y N N N N N 12.714 -15.449 -17.027 -0.087 -3.001 -0.706 N20 YQU 25 YQU O8 O1 O 0 1 N N N N N N 9.068 -11.896 -17.663 -1.447 2.492 0.135 O8 YQU 26 YQU O9 O2 O 0 1 N N N N N N 7.344 -13.186 -18.179 -1.984 1.006 1.694 O9 YQU 27 YQU CL28 CL1 CL 0 0 N N N N N N 8.829 -19.028 -17.194 4.191 -1.760 1.157 CL28 YQU 28 YQU H33 H1 H 0 1 N N N N N N 11.098 -11.680 -18.275 -2.955 -0.574 1.206 H33 YQU 29 YQU H32 H2 H 0 1 N N N N N N 12.696 -12.055 -19.003 -3.677 -2.024 0.470 H32 YQU 30 YQU H37 H3 H 0 1 N N N N N N 12.155 -10.150 -23.833 -6.461 2.784 1.036 H37 YQU 31 YQU H38 H4 H 0 1 N N N N N N 10.597 -8.357 -23.209 -8.450 1.459 0.444 H38 YQU 32 YQU H39 H5 H 0 1 N N N N N N 9.220 -8.583 -21.185 -8.193 -0.687 -0.737 H39 YQU 33 YQU H40 H6 H 0 1 N N N N N N 9.394 -10.596 -19.791 -5.948 -1.506 -1.327 H40 YQU 34 YQU H41 H7 H 0 1 N N N N N N 13.874 -14.103 -18.146 -2.070 -3.724 -0.595 H41 YQU 35 YQU H42 H8 H 0 1 N N N N N N 7.232 -20.404 -15.384 6.649 -0.402 0.684 H42 YQU 36 YQU H43 H9 H 0 1 N N N N N N 6.648 -17.518 -12.302 5.347 2.990 -1.553 H43 YQU 37 YQU H44 H10 H 0 1 N N N N N N 7.991 -15.886 -13.548 3.021 2.205 -1.409 H44 YQU 38 YQU H47 H11 H 0 1 N N N N N N 6.720 -20.661 -12.295 8.027 1.416 -1.430 H47 YQU 39 YQU H45 H12 H 0 1 N N N N N N 5.299 -19.563 -12.357 7.569 2.915 -0.587 H45 YQU 40 YQU H46 H13 H 0 1 N N N N N N 5.552 -20.779 -13.655 8.112 1.500 0.346 H46 YQU 41 YQU H29 H14 H 0 1 N N N N N N 7.534 -14.966 -16.435 1.357 1.855 0.495 H29 YQU 42 YQU H34 H15 H 0 1 N N N N N N 11.598 -13.503 -20.680 -2.908 0.530 -1.014 H34 YQU 43 YQU H35 H16 H 0 1 N N N N N N 9.998 -13.141 -19.948 -3.631 -0.921 -1.750 H35 YQU 44 YQU H36 H17 H 0 1 N N N N N N 12.357 -12.155 -22.426 -4.215 1.964 0.447 H36 YQU 45 YQU H30 H18 H 0 1 N N N N N N 11.061 -17.230 -15.618 2.601 -2.011 -0.859 H30 YQU 46 YQU H31 H19 H 0 1 N N N N N N 8.458 -11.215 -17.923 -2.157 3.061 0.463 H31 YQU 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YQU C1 C2 DOUB Y N 1 YQU C1 C6 SING Y N 2 YQU C2 C3 SING Y N 3 YQU C2 C21 SING N N 4 YQU C3 C4 DOUB Y N 5 YQU C4 C5 SING Y N 6 YQU C4 N20 SING Y N 7 YQU C5 C6 DOUB Y N 8 YQU C5 N10 SING Y N 9 YQU C6 C7 SING N N 10 YQU C7 O8 SING N N 11 YQU C7 O9 DOUB N N 12 YQU N10 C11 SING N N 13 YQU N10 C19 SING Y N 14 YQU C11 C12 SING N N 15 YQU C12 C13 SING N N 16 YQU C13 C14 DOUB Y N 17 YQU C13 C18 SING Y N 18 YQU C14 C15 SING Y N 19 YQU C15 C16 DOUB Y N 20 YQU C16 C17 SING Y N 21 YQU C17 C18 DOUB Y N 22 YQU C19 N20 DOUB Y N 23 YQU C21 C22 DOUB Y N 24 YQU C21 C26 SING Y N 25 YQU C22 C23 SING Y N 26 YQU C22 CL28 SING N N 27 YQU C23 C24 DOUB Y N 28 YQU C24 C25 SING Y N 29 YQU C24 C27 SING N N 30 YQU C25 C26 DOUB Y N 31 YQU C11 H33 SING N N 32 YQU C11 H32 SING N N 33 YQU C15 H37 SING N N 34 YQU C16 H38 SING N N 35 YQU C17 H39 SING N N 36 YQU C18 H40 SING N N 37 YQU C19 H41 SING N N 38 YQU C23 H42 SING N N 39 YQU C25 H43 SING N N 40 YQU C26 H44 SING N N 41 YQU C27 H47 SING N N 42 YQU C27 H45 SING N N 43 YQU C27 H46 SING N N 44 YQU C1 H29 SING N N 45 YQU C12 H34 SING N N 46 YQU C12 H35 SING N N 47 YQU C14 H36 SING N N 48 YQU C3 H30 SING N N 49 YQU O8 H31 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YQU SMILES ACDLabs 12.01 "Cc1ccc(c2cc3ncn(CCc4ccccc4)c3c(c2)C(=O)O)c(Cl)c1" YQU InChI InChI 1.06 "InChI=1S/C23H19ClN2O2/c1-15-7-8-18(20(24)11-15)17-12-19(23(27)28)22-21(13-17)25-14-26(22)10-9-16-5-3-2-4-6-16/h2-8,11-14H,9-10H2,1H3,(H,27,28)" YQU InChIKey InChI 1.06 PJTHFHWPRCRNHR-UHFFFAOYSA-N YQU SMILES_CANONICAL CACTVS 3.385 "Cc1ccc(c(Cl)c1)c2cc3ncn(CCc4ccccc4)c3c(c2)C(O)=O" YQU SMILES CACTVS 3.385 "Cc1ccc(c(Cl)c1)c2cc3ncn(CCc4ccccc4)c3c(c2)C(O)=O" YQU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(c(c1)Cl)c2cc(c3c(c2)ncn3CCc4ccccc4)C(=O)O" YQU SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc(c(c1)Cl)c2cc(c3c(c2)ncn3CCc4ccccc4)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YQU "SYSTEMATIC NAME" ACDLabs 12.01 "(5M)-5-(2-chloro-4-methylphenyl)-1-(2-phenylethyl)-1H-benzimidazole-7-carboxylic acid" YQU "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "6-(2-chloranyl-4-methyl-phenyl)-3-(2-phenylethyl)benzimidazole-4-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YQU "Create component" 2023-02-15 RCSB YQU "Initial release" 2024-02-21 RCSB #