data_YR6 # _chem_comp.id YR6 _chem_comp.name "(2Z)-2-cyano-N-[(4P)-4-(3-fluorophenyl)-5-(methanesulfonyl)pyrimidin-2-yl]-3-hydroxy-3-(5-methyl-1,2-oxazol-4-yl)prop-2-enamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H14 F N5 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-02-15 _chem_comp.pdbx_modified_date 2024-02-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 443.408 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YR6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7FUJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YR6 C10 C1 C 0 1 Y N N N N N 14.996 10.797 24.494 -2.591 -1.201 0.192 C10 YR6 1 YR6 O14 O1 O 0 1 N N N N N N 13.991 11.278 26.847 -3.951 -3.296 0.538 O14 YR6 2 YR6 C15 C2 C 0 1 Y N N N N N 15.997 10.719 23.475 -2.435 0.186 0.123 C15 YR6 3 YR6 C16 C3 C 0 1 Y N N N N N 17.422 11.112 23.631 -3.622 1.076 0.090 C16 YR6 4 YR6 C17 C4 C 0 1 Y N N N N N 18.250 10.466 24.555 -3.783 2.061 1.062 C17 YR6 5 YR6 C18 C5 C 0 1 Y N N N N N 19.581 10.834 24.693 -4.888 2.888 1.028 C18 YR6 6 YR6 C19 C6 C 0 1 Y N N N N N 20.139 11.790 23.855 -5.836 2.739 0.032 C19 YR6 7 YR6 C20 C7 C 0 1 Y N N N N N 19.319 12.372 22.913 -5.681 1.762 -0.938 C20 YR6 8 YR6 C21 C8 C 0 1 Y N N N N N 17.983 12.073 22.783 -4.576 0.933 -0.916 C21 YR6 9 YR6 C24 C9 C 0 1 N N N N N N 14.215 8.680 17.996 4.671 -0.541 -0.044 C24 YR6 10 YR6 C26 C10 C 0 1 Y N N N N N 14.260 8.411 16.590 6.014 0.033 0.107 C26 YR6 11 YR6 C27 C11 C 0 1 Y N N N N N 15.247 7.863 15.824 7.109 -0.089 -0.735 C27 YR6 12 YR6 N1 N1 N 0 1 N N N N N N 10.776 8.303 17.714 3.823 2.824 0.207 N1 YR6 13 YR6 C2 C12 C 0 1 N N N N N N 11.806 8.496 18.159 3.701 1.697 0.146 C2 YR6 14 YR6 C3 C13 C 0 1 N N N N N N 13.070 8.751 18.762 3.549 0.275 0.070 C3 YR6 15 YR6 C4 C14 C 0 1 N N N N N N 13.014 9.147 20.160 2.211 -0.321 0.111 C4 YR6 16 YR6 O5 O2 O 0 1 N N N N N N 11.918 9.181 20.749 2.086 -1.530 0.177 O5 YR6 17 YR6 N6 N2 N 0 1 N N N N N N 14.193 9.356 20.776 1.120 0.469 0.076 N6 YR6 18 YR6 C7 C15 C 0 1 Y N N N N N 14.445 9.792 22.055 -0.147 -0.096 0.116 C7 YR6 19 YR6 N8 N3 N 0 1 Y N N N N N 13.425 9.867 22.923 -0.264 -1.413 0.187 N8 YR6 20 YR6 C9 C16 C 0 1 Y N N N N N 13.729 10.345 24.133 -1.455 -1.990 0.226 C9 YR6 21 YR6 S11 S1 S 0 1 N N N N N N 15.216 11.470 26.134 -4.195 -1.928 0.242 S11 YR6 22 YR6 C12 C17 C 0 1 N N N N N N 16.470 10.550 26.925 -5.018 -1.112 1.638 C12 YR6 23 YR6 O13 O3 O 0 1 N N N N N N 15.691 12.815 25.963 -4.794 -1.540 -0.987 O13 YR6 24 YR6 F22 F1 F 0 1 N N N N N N 19.847 13.300 22.078 -6.611 1.621 -1.908 F22 YR6 25 YR6 N23 N4 N 0 1 Y N N N N N 15.704 10.216 22.263 -1.207 0.696 0.086 N23 YR6 26 YR6 O25 O4 O 0 1 N N N N N N 15.395 8.940 18.519 4.525 -1.859 -0.294 O25 YR6 27 YR6 O28 O5 O 0 1 Y N N N N N 14.889 7.908 14.532 8.094 0.612 -0.167 O28 YR6 28 YR6 N29 N5 N 0 1 Y N N N N N 13.626 8.533 14.426 7.770 1.130 0.872 N29 YR6 29 YR6 C30 C18 C 0 1 Y N N N N N 13.309 8.849 15.646 6.533 0.887 1.189 C30 YR6 30 YR6 C31 C19 C 0 1 N N N N N N 16.553 7.230 16.113 7.174 -0.857 -2.031 C31 YR6 31 YR6 H37 H1 H 0 1 N N N N N N 17.849 9.672 25.168 -3.045 2.178 1.841 H37 YR6 32 YR6 H38 H2 H 0 1 N N N N N N 20.188 10.373 25.458 -5.013 3.651 1.781 H38 YR6 33 YR6 H39 H3 H 0 1 N N N N N N 21.179 12.068 23.939 -6.699 3.388 0.010 H39 YR6 34 YR6 H40 H4 H 0 1 N N N N N N 17.378 12.571 22.040 -4.453 0.174 -1.674 H40 YR6 35 YR6 H32 H5 H 0 1 N N N N N N 15.004 9.166 20.222 1.220 1.432 0.024 H32 YR6 36 YR6 H33 H6 H 0 1 N N N N N N 12.946 10.383 24.875 -1.539 -3.066 0.285 H33 YR6 37 YR6 H35 H7 H 0 1 N N N N N N 16.628 10.943 27.940 -5.063 -0.038 1.455 H35 YR6 38 YR6 H34 H8 H 0 1 N N N N N N 16.168 9.494 26.983 -6.029 -1.505 1.743 H34 YR6 39 YR6 H36 H9 H 0 1 N N N N N N 17.404 10.633 26.350 -4.457 -1.302 2.552 H36 YR6 40 YR6 H41 H10 H 0 1 N N N N N N 16.065 8.843 17.853 3.628 -2.175 -0.468 H41 YR6 41 YR6 H42 H11 H 0 1 N N N N N N 12.412 9.390 15.909 6.000 1.235 2.062 H42 YR6 42 YR6 H45 H12 H 0 1 N N N N N N 17.015 6.896 15.172 6.975 -0.182 -2.863 H45 YR6 43 YR6 H44 H13 H 0 1 N N N N N N 17.213 7.959 16.606 8.167 -1.292 -2.145 H44 YR6 44 YR6 H43 H14 H 0 1 N N N N N N 16.402 6.365 16.775 6.428 -1.651 -2.020 H43 YR6 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YR6 N1 C2 TRIP N N 1 YR6 C2 C3 SING N N 2 YR6 C3 C4 SING N N 3 YR6 C3 C24 DOUB N Z 4 YR6 C4 O5 DOUB N N 5 YR6 C4 N6 SING N N 6 YR6 N6 C7 SING N N 7 YR6 C7 N8 DOUB Y N 8 YR6 C7 N23 SING Y N 9 YR6 N8 C9 SING Y N 10 YR6 C9 C10 DOUB Y N 11 YR6 C10 S11 SING N N 12 YR6 C10 C15 SING Y N 13 YR6 S11 C12 SING N N 14 YR6 S11 O13 DOUB N N 15 YR6 S11 O14 DOUB N N 16 YR6 C15 C16 SING N N 17 YR6 C15 N23 DOUB Y N 18 YR6 C16 C17 DOUB Y N 19 YR6 C16 C21 SING Y N 20 YR6 C17 C18 SING Y N 21 YR6 C18 C19 DOUB Y N 22 YR6 C19 C20 SING Y N 23 YR6 C20 C21 DOUB Y N 24 YR6 C20 F22 SING N N 25 YR6 C24 O25 SING N N 26 YR6 C24 C26 SING N N 27 YR6 C26 C27 DOUB Y N 28 YR6 C26 C30 SING Y N 29 YR6 C27 O28 SING Y N 30 YR6 C27 C31 SING N N 31 YR6 O28 N29 SING Y N 32 YR6 N29 C30 DOUB Y N 33 YR6 C17 H37 SING N N 34 YR6 C18 H38 SING N N 35 YR6 C19 H39 SING N N 36 YR6 C21 H40 SING N N 37 YR6 N6 H32 SING N N 38 YR6 C9 H33 SING N N 39 YR6 C12 H35 SING N N 40 YR6 C12 H34 SING N N 41 YR6 C12 H36 SING N N 42 YR6 O25 H41 SING N N 43 YR6 C30 H42 SING N N 44 YR6 C31 H45 SING N N 45 YR6 C31 H44 SING N N 46 YR6 C31 H43 SING N N 47 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YR6 SMILES ACDLabs 12.01 "Cc1oncc1C(/O)=C(\C#N)C(=O)Nc1nc(c2cccc(F)c2)c(cn1)S(C)(=O)=O" YR6 InChI InChI 1.06 "InChI=1S/C19H14FN5O5S/c1-10-14(8-23-30-10)17(26)13(7-21)18(27)25-19-22-9-15(31(2,28)29)16(24-19)11-4-3-5-12(20)6-11/h3-6,8-9,26H,1-2H3,(H,22,24,25,27)/b17-13-" YR6 InChIKey InChI 1.06 KHDIFRJVCJOWNQ-LGMDPLHJSA-N YR6 SMILES_CANONICAL CACTVS 3.385 "Cc1oncc1\C(O)=C(/C#N)C(=O)Nc2ncc(c(n2)c3cccc(F)c3)[S](C)(=O)=O" YR6 SMILES CACTVS 3.385 "Cc1oncc1C(O)=C(C#N)C(=O)Nc2ncc(c(n2)c3cccc(F)c3)[S](C)(=O)=O" YR6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(cno1)/C(=C(\C#N)/C(=O)Nc2ncc(c(n2)c3cccc(c3)F)S(=O)(=O)C)/O" YR6 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(cno1)C(=C(C#N)C(=O)Nc2ncc(c(n2)c3cccc(c3)F)S(=O)(=O)C)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YR6 "SYSTEMATIC NAME" ACDLabs 12.01 "(2Z)-2-cyano-N-[(4P)-4-(3-fluorophenyl)-5-(methanesulfonyl)pyrimidin-2-yl]-3-hydroxy-3-(5-methyl-1,2-oxazol-4-yl)prop-2-enamide" YR6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(~{Z})-2-cyano-~{N}-[4-(3-fluorophenyl)-5-methylsulfonyl-pyrimidin-2-yl]-3-(5-methyl-1,2-oxazol-4-yl)-3-oxidanyl-prop-2-enamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YR6 "Create component" 2023-02-15 RCSB YR6 "Initial release" 2024-02-21 RCSB #