data_YS1 # _chem_comp.id YS1 _chem_comp.name "[({4-[4-(cyclopropyloxy)phenyl]pyridin-2-yl}amino)methanediyl]bis(phosphonic acid)" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H18 N2 O7 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-03-31 _chem_comp.pdbx_modified_date 2015-04-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 400.260 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YS1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4PVX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YS1 OAJ OAJ O 0 1 N N N 16.352 32.709 -10.489 -4.744 -0.223 -2.220 OAJ YS1 1 YS1 PAI PAI P 0 1 N N N 16.576 34.013 -9.611 -4.451 0.540 -0.986 PAI YS1 2 YS1 OAK OAK O 0 1 N N N 17.943 33.872 -8.911 -4.570 2.117 -1.289 OAK YS1 3 YS1 OAL OAL O 0 1 N N N 16.340 35.239 -10.400 -5.505 0.133 0.160 OAL YS1 4 YS1 CAH CAH C 0 1 N N N 15.303 34.055 -8.276 -2.761 0.156 -0.421 CAH YS1 5 YS1 PAM PAM P 0 1 N N N 15.430 35.620 -7.348 -2.400 1.096 1.099 PAM YS1 6 YS1 OAN OAN O 0 1 N N N 14.344 35.508 -6.254 -2.519 2.672 0.796 OAN YS1 7 YS1 OAP OAP O 0 1 N N N 16.752 35.664 -6.630 -3.454 0.688 2.245 OAP YS1 8 YS1 OAO OAO O 0 1 N N N 15.194 36.710 -8.307 -1.028 0.784 1.557 OAO YS1 9 YS1 NAG NAG N 0 1 N N N 15.489 32.950 -7.318 -2.652 -1.279 -0.145 NAG YS1 10 YS1 CAD CAD C 0 1 Y N N 15.233 31.674 -7.705 -1.400 -1.867 -0.004 CAD YS1 11 YS1 CAE CAE C 0 1 Y N N 16.048 30.678 -7.161 -0.258 -1.088 -0.127 CAE YS1 12 YS1 NAC NAC N 0 1 Y N N 14.256 31.379 -8.642 -1.311 -3.164 0.250 NAC YS1 13 YS1 CAB CAB C 0 1 Y N N 14.120 29.999 -8.980 -0.146 -3.768 0.393 CAB YS1 14 YS1 CAA CAA C 0 1 Y N N 14.941 28.983 -8.417 1.036 -3.067 0.281 CAA YS1 15 YS1 CAF CAF C 0 1 Y N N 15.929 29.298 -7.486 0.991 -1.693 0.018 CAF YS1 16 YS1 CAQ CAQ C 0 1 Y N N 16.810 28.318 -6.944 2.239 -0.902 -0.110 CAQ YS1 17 YS1 CAV CAV C 0 1 Y N N 16.487 27.003 -6.692 2.175 0.467 -0.367 CAV YS1 18 YS1 CAU CAU C 0 1 Y N N 17.366 26.045 -6.198 3.338 1.200 -0.485 CAU YS1 19 YS1 CAR CAR C 0 1 Y N N 18.130 28.624 -6.715 3.478 -1.524 0.033 CAR YS1 20 YS1 CAS CAS C 0 1 Y N N 19.023 27.682 -6.211 4.637 -0.786 -0.086 CAS YS1 21 YS1 CAT CAT C 0 1 Y N N 18.652 26.380 -5.921 4.570 0.576 -0.348 CAT YS1 22 YS1 OAW OAW O 0 1 N N N 19.606 25.491 -5.500 5.714 1.300 -0.465 OAW YS1 23 YS1 CAX CAX C 0 1 N N N 19.263 24.276 -4.824 6.942 0.622 -0.194 CAX YS1 24 YS1 CAY CAY C 0 1 N N N 20.252 23.630 -4.049 8.216 1.189 -0.823 CAY YS1 25 YS1 CAZ CAZ C 0 1 N N N 19.677 24.861 -3.590 7.970 1.345 0.679 CAZ YS1 26 YS1 H1 H1 H 0 1 N N N 18.342 33.046 -9.158 -5.445 2.394 -1.594 H1 YS1 27 YS1 H2 H2 H 0 1 N N N 16.098 35.003 -11.288 -5.373 0.595 0.999 H2 YS1 28 YS1 H3 H3 H 0 1 N N N 14.314 34.028 -8.757 -2.047 0.432 -1.197 H3 YS1 29 YS1 H4 H4 H 0 1 N N N 13.688 36.181 -6.389 -3.393 2.949 0.490 H4 YS1 30 YS1 H5 H5 H 0 1 N N N 17.246 36.421 -6.922 -3.322 1.151 3.084 H5 YS1 31 YS1 H6 H6 H 0 1 N N N 16.445 32.978 -7.025 -3.454 -1.818 -0.061 H6 YS1 32 YS1 H7 H7 H 0 1 N N N 16.810 30.972 -6.455 -0.334 -0.030 -0.331 H7 YS1 33 YS1 H8 H8 H 0 1 N N N 13.361 29.714 -9.694 -0.118 -4.828 0.600 H8 YS1 34 YS1 H9 H9 H 0 1 N N N 14.797 27.955 -8.715 1.984 -3.570 0.400 H9 YS1 35 YS1 H10 H10 H 0 1 N N N 15.473 26.692 -6.894 1.217 0.952 -0.475 H10 YS1 36 YS1 H11 H11 H 0 1 N N N 17.025 25.033 -6.035 3.289 2.260 -0.684 H11 YS1 37 YS1 H12 H12 H 0 1 N N N 18.484 29.621 -6.932 3.531 -2.584 0.237 H12 YS1 38 YS1 H13 H13 H 0 1 N N N 20.047 27.979 -6.039 5.597 -1.268 0.025 H13 YS1 39 YS1 H14 H14 H 0 1 N N N 18.256 23.845 -4.929 6.869 -0.461 -0.094 H14 YS1 40 YS1 H15 H15 H 0 1 N N N 20.017 22.688 -3.533 8.981 0.479 -1.138 H15 YS1 41 YS1 H16 H16 H 0 1 N N N 21.295 23.607 -4.397 8.117 2.080 -1.444 H16 YS1 42 YS1 H17 H17 H 0 1 N N N 20.276 25.784 -3.590 7.710 2.338 1.046 H17 YS1 43 YS1 H18 H18 H 0 1 N N N 18.997 24.864 -2.725 8.574 0.737 1.353 H18 YS1 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YS1 OAJ PAI DOUB N N 1 YS1 OAL PAI SING N N 2 YS1 PAI OAK SING N N 3 YS1 PAI CAH SING N N 4 YS1 CAB NAC DOUB Y N 5 YS1 CAB CAA SING Y N 6 YS1 NAC CAD SING Y N 7 YS1 CAA CAF DOUB Y N 8 YS1 OAO PAM DOUB N N 9 YS1 CAH PAM SING N N 10 YS1 CAH NAG SING N N 11 YS1 CAD NAG SING N N 12 YS1 CAD CAE DOUB Y N 13 YS1 CAF CAE SING Y N 14 YS1 CAF CAQ SING N N 15 YS1 PAM OAP SING N N 16 YS1 PAM OAN SING N N 17 YS1 CAQ CAR DOUB Y N 18 YS1 CAQ CAV SING Y N 19 YS1 CAR CAS SING Y N 20 YS1 CAV CAU DOUB Y N 21 YS1 CAS CAT DOUB Y N 22 YS1 CAU CAT SING Y N 23 YS1 CAT OAW SING N N 24 YS1 OAW CAX SING N N 25 YS1 CAX CAY SING N N 26 YS1 CAX CAZ SING N N 27 YS1 CAY CAZ SING N N 28 YS1 OAK H1 SING N N 29 YS1 OAL H2 SING N N 30 YS1 CAH H3 SING N N 31 YS1 OAN H4 SING N N 32 YS1 OAP H5 SING N N 33 YS1 NAG H6 SING N N 34 YS1 CAE H7 SING N N 35 YS1 CAB H8 SING N N 36 YS1 CAA H9 SING N N 37 YS1 CAV H10 SING N N 38 YS1 CAU H11 SING N N 39 YS1 CAR H12 SING N N 40 YS1 CAS H13 SING N N 41 YS1 CAX H14 SING N N 42 YS1 CAY H15 SING N N 43 YS1 CAY H16 SING N N 44 YS1 CAZ H17 SING N N 45 YS1 CAZ H18 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YS1 SMILES ACDLabs 12.01 "O=P(O)(O)C(Nc1nccc(c1)c3ccc(OC2CC2)cc3)P(=O)(O)O" YS1 InChI InChI 1.03 "InChI=1S/C15H18N2O7P2/c18-25(19,20)15(26(21,22)23)17-14-9-11(7-8-16-14)10-1-3-12(4-2-10)24-13-5-6-13/h1-4,7-9,13,15H,5-6H2,(H,16,17)(H2,18,19,20)(H2,21,22,23)" YS1 InChIKey InChI 1.03 MYPRZOLXSMRMEV-UHFFFAOYSA-N YS1 SMILES_CANONICAL CACTVS 3.385 "O[P](O)(=O)C(Nc1cc(ccn1)c2ccc(OC3CC3)cc2)[P](O)(O)=O" YS1 SMILES CACTVS 3.385 "O[P](O)(=O)C(Nc1cc(ccn1)c2ccc(OC3CC3)cc2)[P](O)(O)=O" YS1 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1cc(ccc1c2ccnc(c2)NC(P(=O)(O)O)P(=O)(O)O)OC3CC3" YS1 SMILES "OpenEye OEToolkits" 1.7.6 "c1cc(ccc1c2ccnc(c2)NC(P(=O)(O)O)P(=O)(O)O)OC3CC3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YS1 "SYSTEMATIC NAME" ACDLabs 12.01 "[({4-[4-(cyclopropyloxy)phenyl]pyridin-2-yl}amino)methanediyl]bis(phosphonic acid)" YS1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[[[4-(4-cyclopropyloxyphenyl)pyridin-2-yl]amino]-phosphono-methyl]phosphonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YS1 "Create component" 2014-03-31 RCSB YS1 "Initial release" 2015-04-15 RCSB #