data_YTL # _chem_comp.id YTL _chem_comp.name "(2~{S})-2-(2-azanylethanoyloxy)-3-(4-hydroxyphenyl)propanoic acid" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C11 H13 N O5" _chem_comp.mon_nstd_parent_comp_id TYR _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-02-21 _chem_comp.pdbx_modified_date 2025-03-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 239.225 _chem_comp.one_letter_code Y _chem_comp.three_letter_code YTL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4MSW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YTL C1 C1 C 0 1 N N N N N N -2.868 -1.852 6.703 -2.408 1.697 -0.028 C1 YTL 1 YTL C2 C2 C 0 1 N N S N N N -3.773 -1.418 5.547 -1.115 0.930 0.087 C2 YTL 2 YTL C3 C3 C 0 1 N N N N N N -5.217 -1.514 6.041 0.017 1.743 -0.543 C3 YTL 3 YTL C4 C4 C 0 1 Y N N N N N -6.258 -0.923 5.123 1.328 1.035 -0.320 C4 YTL 4 YTL C5 C5 C 0 1 Y N N N N N -6.234 0.423 4.777 1.783 0.116 -1.248 C5 YTL 5 YTL C7 C6 C 0 1 Y N N N N N -8.235 0.164 3.510 3.736 -0.266 0.089 C7 YTL 6 YTL C9 C7 C 0 1 Y N N N N N -7.301 -1.700 4.651 2.078 1.309 0.810 C9 YTL 7 YTL N N1 N 0 1 N N N N N N -3.049 -3.096 1.515 -2.344 -3.698 0.449 N YTL 8 YTL CA C8 C 0 1 N N N N N N -2.309 -3.485 2.710 -1.846 -2.733 -0.540 CA YTL 9 YTL C C9 C 0 1 N N N N N N -2.394 -2.543 3.911 -1.688 -1.383 0.112 C YTL 10 YTL O O1 O 0 1 N N N N N N -1.370 -2.086 4.448 -1.963 -1.240 1.280 O YTL 11 YTL O1 O2 O 0 1 N N N N N N -2.288 -1.005 7.440 -3.309 1.263 -0.706 O1 YTL 12 YTL O3 O3 O 0 1 N N N N N N -9.218 0.667 2.708 4.919 -0.904 0.289 O3 YTL 13 YTL O4 O4 O 0 1 N N N N N N -3.602 -2.250 4.358 -1.243 -0.340 -0.606 O4 YTL 14 YTL C6 C10 C 0 1 Y N N N N N -7.224 0.969 3.966 2.985 -0.535 -1.046 C6 YTL 15 YTL C8 C11 C 0 1 Y N N N N N -8.277 -1.167 3.849 3.280 0.661 1.016 C8 YTL 16 YTL H2 H2 H 0 1 N N N N N N -3.552 -0.369 5.300 -0.892 0.750 1.139 H2 YTL 17 YTL H3 H3 H 0 1 N N N N N N -5.280 -0.991 7.007 -0.162 1.848 -1.613 H3 YTL 18 YTL H4 H4 H 0 1 N N N N N N -5.456 -2.578 6.184 0.055 2.731 -0.082 H4 YTL 19 YTL H5 H5 H 0 1 N N N N N N -5.437 1.053 5.142 1.198 -0.093 -2.131 H5 YTL 20 YTL H6 H6 H 0 1 N N N N N N -7.347 -2.745 4.919 1.722 2.030 1.531 H6 YTL 21 YTL H7 H7 H 0 1 N N N N N N -2.918 -3.785 0.802 -3.207 -3.379 0.863 H7 YTL 22 YTL H8 H8 H 0 1 N N N N N N -4.022 -3.024 1.734 -2.458 -4.612 0.036 H8 YTL 23 YTL H10 H10 H 0 1 N N N N N N -2.687 -4.467 3.030 -0.881 -3.068 -0.920 H10 YTL 24 YTL H11 H11 H 0 1 N N N N N N -1.249 -3.573 2.431 -2.555 -2.658 -1.364 H11 YTL 25 YTL H12 H12 H 0 1 N N N N N N -9.062 1.592 2.558 4.840 -1.732 0.783 H12 YTL 26 YTL H13 H13 H 0 1 N N N N N N -7.196 2.015 3.699 3.337 -1.256 -1.769 H13 YTL 27 YTL H14 H14 H 0 1 N N N N N N -9.078 -1.793 3.484 3.863 0.872 1.900 H14 YTL 28 YTL OXT OXT O 0 1 N Y N N N N -2.781 -3.168 6.888 -2.560 2.858 0.628 OXT YTL 29 YTL H1 H1 H 0 1 N Y N N N N -2.229 -3.347 7.640 -3.408 3.311 0.527 H1 YTL 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YTL N CA SING N N 1 YTL O3 C7 SING N N 2 YTL CA C SING N N 3 YTL C7 C8 DOUB Y N 4 YTL C7 C6 SING Y N 5 YTL C8 C9 SING Y N 6 YTL C O4 SING N N 7 YTL C O DOUB N N 8 YTL C6 C5 DOUB Y N 9 YTL O4 C2 SING N N 10 YTL C9 C4 DOUB Y N 11 YTL C5 C4 SING Y N 12 YTL C4 C3 SING N N 13 YTL C2 C3 SING N N 14 YTL C2 C1 SING N N 15 YTL C1 O1 DOUB N N 16 YTL C2 H2 SING N N 17 YTL C3 H3 SING N N 18 YTL C3 H4 SING N N 19 YTL C5 H5 SING N N 20 YTL C9 H6 SING N N 21 YTL N H7 SING N N 22 YTL N H8 SING N N 23 YTL CA H10 SING N N 24 YTL CA H11 SING N N 25 YTL O3 H12 SING N N 26 YTL C6 H13 SING N N 27 YTL C8 H14 SING N N 28 YTL C1 OXT SING N N 29 YTL OXT H1 SING N N 30 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YTL InChI InChI 1.06 "InChI=1S/C11H13NO5/c12-6-10(14)17-9(11(15)16)5-7-1-3-8(13)4-2-7/h1-4,9,13H,5-6,12H2,(H,15,16)/t9-/m0/s1" YTL InChIKey InChI 1.06 MXLPCJHNYUDPMI-VIFPVBQESA-N YTL SMILES_CANONICAL CACTVS 3.385 "NCC(=O)O[C@@H](Cc1ccc(O)cc1)C(O)=O" YTL SMILES CACTVS 3.385 "NCC(=O)O[CH](Cc1ccc(O)cc1)C(O)=O" YTL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C[C@@H](C(=O)O)OC(=O)CN)O" YTL SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1CC(C(=O)O)OC(=O)CN)O" # _pdbx_chem_comp_identifier.comp_id YTL _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-(2-azanylethanoyloxy)-3-(4-hydroxyphenyl)propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YTL "Create component" 2023-02-21 RCSB YTL "Modify parent residue" 2023-02-21 RCSB YTL "Initial release" 2025-03-26 RCSB #