data_YUD # _chem_comp.id YUD _chem_comp.name "(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(2S,3R)-3-hydroxy-4-{[(1S)-1-hydroxy-2,3-dihydro-1H-indene-5-sulfonyl][(2S)-2-methylbutyl]amino}-1-phenylbutan-2-yl]carbamate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H42 N2 O8 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-03-31 _chem_comp.pdbx_modified_date 2022-08-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 602.739 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YUD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7M9W _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YUD C10 C1 C 0 1 N N N 19.118 -1.471 14.468 1.598 -1.675 -0.667 C10 YUD 1 YUD C13 C2 C 0 1 N N S 19.701 -0.056 16.393 -0.749 -0.820 -0.638 C13 YUD 2 YUD C15 C3 C 0 1 N N N 21.641 0.551 17.978 -3.062 -0.385 -0.005 C15 YUD 3 YUD C21 C4 C 0 1 N N S 22.936 2.406 20.415 -6.294 1.133 0.775 C21 YUD 4 YUD C22 C5 C 0 1 N N R 23.541 3.818 20.062 -7.497 0.530 1.542 C22 YUD 5 YUD C24 C6 C 0 1 N N N 21.298 3.741 19.678 -6.762 2.319 2.819 C24 YUD 6 YUD C26 C7 C 0 1 N N N 18.366 0.682 16.483 -0.574 -0.106 -1.980 C26 YUD 7 YUD C28 C8 C 0 1 Y N N 17.801 0.105 19.023 -2.061 -1.265 -3.626 C28 YUD 8 YUD C01 C9 C 0 1 Y N N 15.318 -4.845 13.406 4.831 2.269 1.599 C01 YUD 9 YUD C02 C10 C 0 1 Y N N 16.134 -3.896 14.287 4.812 0.942 1.212 C02 YUD 10 YUD C03 C11 C 0 1 Y N N 17.287 -4.498 15.061 4.260 0.586 -0.004 C03 YUD 11 YUD C04 C12 C 0 1 Y N N 17.686 -5.957 14.969 3.728 1.556 -0.830 C04 YUD 12 YUD C09 C13 C 0 1 N N N 20.318 -3.813 14.446 2.856 -2.457 1.393 C09 YUD 13 YUD C11 C14 C 0 1 N N R 20.062 -0.375 14.940 0.585 -0.833 0.111 C11 YUD 14 YUD C18 C15 C 0 1 N N R 23.309 1.536 19.490 -5.375 -0.079 0.497 C18 YUD 15 YUD C19 C16 C 0 1 N N N 24.768 2.068 18.990 -5.873 -1.117 1.534 C19 YUD 16 YUD C23 C17 C 0 1 N N N 21.477 2.663 20.400 -5.615 2.062 1.808 C23 YUD 17 YUD C27 C18 C 0 1 Y N N 18.160 1.100 17.936 -1.854 -0.200 -2.770 C27 YUD 18 YUD C29 C19 C 0 1 Y N N 17.613 0.575 20.439 -3.235 -1.352 -4.351 C29 YUD 19 YUD C30 C20 C 0 1 Y N N 17.742 2.015 20.765 -4.205 -0.375 -4.215 C30 YUD 20 YUD C31 C21 C 0 1 Y N N 18.062 2.993 19.681 -4.000 0.687 -3.354 C31 YUD 21 YUD C32 C22 C 0 1 Y N N 18.279 2.538 18.278 -2.821 0.779 -2.638 C32 YUD 22 YUD C33 C23 C 0 1 N N S 21.844 -3.469 14.463 3.047 -3.959 1.173 C33 YUD 23 YUD C34 C24 C 0 1 N N N 22.605 -4.492 13.649 2.936 -4.689 2.513 C34 YUD 24 YUD C35 C25 C 0 1 N N N 22.344 -3.381 15.896 4.429 -4.214 0.567 C35 YUD 25 YUD C36 C26 C 0 1 N N N 16.062 -8.557 12.542 3.911 5.306 -0.447 C36 YUD 26 YUD C37 C27 C 0 1 N N N 16.971 -8.354 13.744 3.236 4.120 -1.157 C37 YUD 27 YUD C38 C28 C 0 1 Y N N 16.843 -6.856 14.063 3.746 2.886 -0.445 C38 YUD 28 YUD C39 C29 C 0 1 Y N N 15.677 -6.317 13.330 4.293 3.242 0.774 C39 YUD 29 YUD C40 C30 C 0 1 N N S 15.061 -7.425 12.560 4.191 4.740 0.962 C40 YUD 30 YUD C42 C31 C 0 1 N N N 22.583 -5.871 14.370 3.003 -6.200 2.278 C42 YUD 31 YUD N08 N1 N 0 1 N N N 19.511 -2.782 15.117 2.843 -1.771 0.099 N08 YUD 32 YUD N14 N2 N 0 1 N N N 20.703 0.860 16.877 -1.752 -0.114 0.163 N14 YUD 33 YUD O06 O1 O 0 1 N N N 17.468 -2.380 16.632 4.107 -1.107 -1.914 O06 YUD 34 YUD O07 O2 O 0 1 N N N 18.965 -4.225 17.160 5.310 -1.739 0.184 O07 YUD 35 YUD O12 O3 O 0 1 N N N 19.887 0.751 14.136 1.074 0.504 0.236 O12 YUD 36 YUD O16 O4 O 0 1 N N N 21.646 -0.517 18.482 -3.410 -1.214 -0.821 O16 YUD 37 YUD O17 O5 O 0 1 N N N 22.530 1.621 18.304 -3.983 0.264 0.732 O17 YUD 38 YUD O20 O6 O 0 1 N N N 24.496 3.405 18.918 -7.291 -0.893 1.586 O20 YUD 39 YUD O25 O7 O 0 1 N N N 22.663 4.587 19.632 -7.452 1.059 2.878 O25 YUD 40 YUD O41 O8 O 0 1 N N N 14.857 -6.928 11.312 5.414 5.271 1.476 O41 YUD 41 YUD S05 S1 S 0 1 N N N 18.304 -3.438 16.126 4.236 -1.105 -0.499 S05 YUD 42 YUD H102 H1 H 0 0 N N N 18.086 -1.215 14.751 1.192 -2.674 -0.828 H102 YUD 43 YUD H101 H2 H 0 0 N N N 19.184 -1.568 13.374 1.799 -1.205 -1.630 H101 YUD 44 YUD H131 H3 H 0 0 N N N 19.670 -0.979 16.991 -1.078 -1.844 -0.812 H131 YUD 45 YUD H211 H4 H 0 0 N N N 23.262 2.120 21.426 -6.588 1.657 -0.135 H211 YUD 46 YUD H221 H5 H 0 0 N N N 24.119 4.197 20.918 -8.440 0.776 1.053 H221 YUD 47 YUD H241 H6 H 0 0 N N N 20.502 4.354 20.125 -6.359 2.586 3.796 H241 YUD 48 YUD H242 H7 H 0 0 N N N 21.010 3.454 18.656 -7.429 3.099 2.453 H242 YUD 49 YUD H261 H8 H 0 0 N N N 18.386 1.572 15.837 -0.331 0.942 -1.805 H261 YUD 50 YUD H262 H9 H 0 0 N N N 17.549 0.017 16.166 0.234 -0.577 -2.539 H262 YUD 51 YUD H281 H10 H 0 0 N N N 17.680 -0.940 18.780 -1.304 -2.028 -3.732 H281 YUD 52 YUD H011 H11 H 0 0 N N N 14.483 -4.465 12.836 5.262 2.547 2.549 H011 YUD 53 YUD H021 H12 H 0 0 N N N 15.898 -2.844 14.353 5.229 0.185 1.860 H021 YUD 54 YUD H041 H13 H 0 0 N N N 18.530 -6.346 15.520 3.297 1.277 -1.780 H041 YUD 55 YUD H091 H14 H 0 0 N N N 19.985 -3.899 13.401 1.910 -2.283 1.906 H091 YUD 56 YUD H092 H15 H 0 0 N N N 20.165 -4.773 14.960 3.675 -2.072 2.001 H092 YUD 57 YUD H111 H16 H 0 0 N N N 21.099 -0.740 14.895 0.441 -1.262 1.102 H111 YUD 58 YUD H181 H17 H 0 0 N N N 23.403 0.503 19.856 -5.515 -0.447 -0.519 H181 YUD 59 YUD H192 H18 H 0 0 N N N 25.046 1.650 18.011 -5.652 -2.131 1.199 H192 YUD 60 YUD H191 H19 H 0 0 N N N 25.560 1.847 19.721 -5.426 -0.930 2.510 H191 YUD 61 YUD H232 H20 H 0 0 N N N 21.109 2.826 21.424 -4.780 1.553 2.289 H232 YUD 62 YUD H231 H21 H 0 0 N N N 20.945 1.811 19.950 -5.289 2.994 1.347 H231 YUD 63 YUD H291 H22 H 0 0 N N N 17.384 -0.137 21.218 -3.395 -2.181 -5.023 H291 YUD 64 YUD H301 H23 H 0 0 N N N 17.605 2.356 21.781 -5.122 -0.443 -4.781 H301 YUD 65 YUD H311 H24 H 0 0 N N N 18.137 4.044 19.917 -4.757 1.449 -3.248 H311 YUD 66 YUD H321 H25 H 0 0 N N N 18.523 3.257 17.510 -2.660 1.611 -1.969 H321 YUD 67 YUD H331 H26 H 0 0 N N N 21.972 -2.484 13.991 2.279 -4.327 0.494 H331 YUD 68 YUD H341 H27 H 0 0 N N N 23.647 -4.160 13.530 3.758 -4.386 3.161 H341 YUD 69 YUD H342 H28 H 0 0 N N N 22.136 -4.591 12.659 1.988 -4.437 2.987 H342 YUD 70 YUD H351 H29 H 0 0 N N N 21.760 -2.626 16.443 4.508 -3.693 -0.388 H351 YUD 71 YUD H353 H30 H 0 0 N N N 22.228 -4.359 16.385 5.198 -3.845 1.246 H353 YUD 72 YUD H352 H31 H 0 0 N N N 23.406 -3.094 15.897 4.565 -5.284 0.410 H352 YUD 73 YUD H361 H32 H 0 0 N N N 15.543 -9.524 12.618 4.842 5.568 -0.951 H361 YUD 74 YUD H362 H33 H 0 0 N N N 16.650 -8.529 11.613 3.243 6.166 -0.393 H362 YUD 75 YUD H371 H34 H 0 0 N N N 16.635 -8.964 14.595 2.152 4.186 -1.055 H371 YUD 76 YUD H372 H35 H 0 0 N N N 18.011 -8.613 13.495 3.517 4.100 -2.210 H372 YUD 77 YUD H401 H36 H 0 0 N N N 14.127 -7.754 13.039 3.365 4.974 1.634 H401 YUD 78 YUD H421 H37 H 0 0 N N N 23.138 -6.608 13.771 2.924 -6.720 3.232 H421 YUD 79 YUD H422 H38 H 0 0 N N N 23.053 -5.775 15.360 2.181 -6.503 1.629 H422 YUD 80 YUD H423 H39 H 0 0 N N N 21.542 -6.206 14.489 3.952 -6.452 1.804 H423 YUD 81 YUD H141 H40 H 0 0 N N N 20.768 1.758 16.442 -1.474 0.548 0.815 H141 YUD 82 YUD H121 H41 H 0 0 N N N 20.473 1.441 14.424 1.237 0.944 -0.609 H121 YUD 83 YUD H411 H42 H 0 0 N N N 14.225 -6.220 11.352 5.642 4.951 2.359 H411 YUD 84 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YUD O41 C40 SING N N 1 YUD C36 C40 SING N N 2 YUD C36 C37 SING N N 3 YUD C40 C39 SING N N 4 YUD C39 C01 DOUB Y N 5 YUD C39 C38 SING Y N 6 YUD C01 C02 SING Y N 7 YUD C34 C42 SING N N 8 YUD C34 C33 SING N N 9 YUD C37 C38 SING N N 10 YUD C38 C04 DOUB Y N 11 YUD O12 C11 SING N N 12 YUD C02 C03 DOUB Y N 13 YUD C09 C33 SING N N 14 YUD C09 N08 SING N N 15 YUD C33 C35 SING N N 16 YUD C10 C11 SING N N 17 YUD C10 N08 SING N N 18 YUD C11 C13 SING N N 19 YUD C04 C03 SING Y N 20 YUD C03 S05 SING N N 21 YUD N08 S05 SING N N 22 YUD S05 O06 DOUB N N 23 YUD S05 O07 DOUB N N 24 YUD C13 C26 SING N N 25 YUD C13 N14 SING N N 26 YUD C26 C27 SING N N 27 YUD N14 C15 SING N N 28 YUD C27 C32 DOUB Y N 29 YUD C27 C28 SING Y N 30 YUD C15 O17 SING N N 31 YUD C15 O16 DOUB N N 32 YUD C32 C31 SING Y N 33 YUD O17 C18 SING N N 34 YUD O20 C19 SING N N 35 YUD O20 C22 SING N N 36 YUD C19 C18 SING N N 37 YUD C28 C29 DOUB Y N 38 YUD C18 C21 SING N N 39 YUD O25 C24 SING N N 40 YUD O25 C22 SING N N 41 YUD C24 C23 SING N N 42 YUD C31 C30 DOUB Y N 43 YUD C22 C21 SING N N 44 YUD C23 C21 SING N N 45 YUD C29 C30 SING Y N 46 YUD C10 H102 SING N N 47 YUD C10 H101 SING N N 48 YUD C13 H131 SING N N 49 YUD C21 H211 SING N N 50 YUD C22 H221 SING N N 51 YUD C24 H241 SING N N 52 YUD C24 H242 SING N N 53 YUD C26 H261 SING N N 54 YUD C26 H262 SING N N 55 YUD C28 H281 SING N N 56 YUD C01 H011 SING N N 57 YUD C02 H021 SING N N 58 YUD C04 H041 SING N N 59 YUD C09 H091 SING N N 60 YUD C09 H092 SING N N 61 YUD C11 H111 SING N N 62 YUD C18 H181 SING N N 63 YUD C19 H192 SING N N 64 YUD C19 H191 SING N N 65 YUD C23 H232 SING N N 66 YUD C23 H231 SING N N 67 YUD C29 H291 SING N N 68 YUD C30 H301 SING N N 69 YUD C31 H311 SING N N 70 YUD C32 H321 SING N N 71 YUD C33 H331 SING N N 72 YUD C34 H341 SING N N 73 YUD C34 H342 SING N N 74 YUD C35 H351 SING N N 75 YUD C35 H353 SING N N 76 YUD C35 H352 SING N N 77 YUD C36 H361 SING N N 78 YUD C36 H362 SING N N 79 YUD C37 H371 SING N N 80 YUD C37 H372 SING N N 81 YUD C40 H401 SING N N 82 YUD C42 H421 SING N N 83 YUD C42 H422 SING N N 84 YUD C42 H423 SING N N 85 YUD N14 H141 SING N N 86 YUD O12 H121 SING N N 87 YUD O41 H411 SING N N 88 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YUD SMILES ACDLabs 12.01 "OC1CCc2cc(ccc21)S(=O)(=O)N(CC(C)CC)CC(O)C(Cc1ccccc1)NC(=O)OC1COC2OCCC12" YUD InChI InChI 1.03 "InChI=1S/C31H42N2O8S/c1-3-20(2)17-33(42(37,38)23-10-11-24-22(16-23)9-12-27(24)34)18-28(35)26(15-21-7-5-4-6-8-21)32-31(36)41-29-19-40-30-25(29)13-14-39-30/h4-8,10-11,16,20,25-30,34-35H,3,9,12-15,17-19H2,1-2H3,(H,32,36)/t20-,25-,26-,27-,28+,29-,30+/m0/s1" YUD InChIKey InChI 1.03 HRBACQIPGZSMKH-YYVMTJSFSA-N YUD SMILES_CANONICAL CACTVS 3.385 "CC[C@H](C)CN(C[C@@H](O)[C@H](Cc1ccccc1)NC(=O)O[C@H]2CO[C@H]3OCC[C@@H]23)[S](=O)(=O)c4ccc5[C@@H](O)CCc5c4" YUD SMILES CACTVS 3.385 "CC[CH](C)CN(C[CH](O)[CH](Cc1ccccc1)NC(=O)O[CH]2CO[CH]3OCC[CH]23)[S](=O)(=O)c4ccc5[CH](O)CCc5c4" YUD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@H](C)CN(C[C@H]([C@H](Cc1ccccc1)NC(=O)O[C@H]2CO[C@@H]3[C@H]2CCO3)O)S(=O)(=O)c4ccc5c(c4)CC[C@@H]5O" YUD SMILES "OpenEye OEToolkits" 2.0.7 "CCC(C)CN(CC(C(Cc1ccccc1)NC(=O)OC2COC3C2CCO3)O)S(=O)(=O)c4ccc5c(c4)CCC5O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YUD "SYSTEMATIC NAME" ACDLabs 12.01 "(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(2S,3R)-3-hydroxy-4-{[(1S)-1-hydroxy-2,3-dihydro-1H-indene-5-sulfonyl][(2S)-2-methylbutyl]amino}-1-phenylbutan-2-yl]carbamate" YUD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(3~{a}~{S},4~{R},6~{a}~{R})-2,3,3~{a},4,5,6~{a}-hexahydrofuro[2,3-b]furan-4-yl] ~{N}-[(2~{S},3~{R})-4-[[(2~{S})-2-methylbutyl]-[[(1~{S})-1-oxidanyl-2,3-dihydro-1~{H}-inden-5-yl]sulfonyl]amino]-3-oxidanyl-1-phenyl-butan-2-yl]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YUD "Create component" 2021-03-31 RCSB YUD "Initial release" 2022-08-31 RCSB #