data_YUQ # _chem_comp.id YUQ _chem_comp.name "7-[(1~{S})-1-[2-(aminomethyl)-6-oxidanylidene-5-oxa-7-azaspiro[3.4]octan-7-yl]ethyl]-3-[3-fluoranyl-4-(methylsulfonylamino)phenyl]-1~{H}-indole-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H27 F N4 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-21 _chem_comp.pdbx_modified_date 2024-07-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 530.568 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YUQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PGO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YUQ C10 C1 C 0 1 Y N N N N N -21.575 -11.854 9.742 -0.876 0.279 0.534 C10 YUQ 1 YUQ C01 C2 C 0 1 N N N N N N -22.517 -12.402 15.570 4.094 3.685 1.187 C01 YUQ 2 YUQ C02 C3 C 0 1 N N S N N N -23.106 -12.053 14.258 3.431 2.306 1.194 C02 YUQ 3 YUQ C03 C4 C 0 1 Y N N N N N -22.498 -12.841 13.066 2.063 2.404 0.569 C03 YUQ 4 YUQ C04 C5 C 0 1 Y N N N N N -22.219 -12.180 11.855 1.135 1.381 0.755 C04 YUQ 5 YUQ C06 C6 C 0 1 Y N N N N N -22.045 -10.672 10.302 -0.019 -0.479 1.315 C06 YUQ 6 YUQ C07 C7 C 0 1 N N N N N N -22.272 -9.340 9.686 -0.335 -1.779 1.909 C07 YUQ 7 YUQ C11 C8 C 0 1 Y N N N N N -21.002 -11.971 8.346 -2.263 -0.063 0.155 C11 YUQ 8 YUQ C12 C9 C 0 1 Y N N N N N -21.128 -13.056 7.532 -3.253 -0.157 1.134 C12 YUQ 9 YUQ C13 C10 C 0 1 Y N N N N N -20.531 -13.032 6.263 -4.546 -0.477 0.778 C13 YUQ 10 YUQ C14 C11 C 0 1 Y N N N N N -19.791 -11.909 5.876 -4.865 -0.706 -0.555 C14 YUQ 11 YUQ C17 C12 C 0 1 N N N N N N -20.664 -9.701 3.460 -7.258 1.434 -0.370 C17 YUQ 12 YUQ C20 C13 C 0 1 Y N N N N N -19.661 -10.828 6.715 -3.880 -0.613 -1.536 C20 YUQ 13 YUQ C22 C14 C 0 1 Y N N N N N -20.239 -10.892 7.956 -2.586 -0.288 -1.186 C22 YUQ 14 YUQ C23 C15 C 0 1 Y N N N N N -21.675 -12.844 10.741 -0.137 1.492 0.164 C23 YUQ 15 YUQ C24 C16 C 0 1 Y N N N N N -21.373 -14.218 10.810 -0.456 2.618 -0.599 C24 YUQ 16 YUQ C25 C17 C 0 1 Y N N N N N -21.653 -14.879 11.994 0.470 3.608 -0.768 C25 YUQ 17 YUQ C26 C18 C 0 1 Y N N N N N -22.205 -14.204 13.106 1.727 3.504 -0.187 C26 YUQ 18 YUQ C28 C19 C 0 1 N N N N N N -25.304 -13.418 14.665 4.842 0.120 0.950 C28 YUQ 19 YUQ C29 C20 C 0 1 N N N N N N -26.731 -13.084 14.356 5.584 -0.458 -0.259 C29 YUQ 20 YUQ C30 C21 C 0 1 N N N N N N -27.674 -14.183 13.973 7.039 -0.855 -0.014 C30 YUQ 21 YUQ C31 C22 C 0 1 N N N N N N -28.672 -13.667 14.986 6.780 -2.050 -0.949 C31 YUQ 22 YUQ C32 C23 C 0 1 N N N N N N -29.209 -14.689 15.922 7.422 -3.354 -0.470 C32 YUQ 23 YUQ C34 C24 C 0 1 N N N N N N -27.584 -12.798 15.555 5.291 -1.923 -0.577 C34 YUQ 24 YUQ C36 C25 C 0 1 N N N N N N -25.370 -11.493 13.384 4.587 1.495 -0.864 C36 YUQ 25 YUQ F21 F1 F 0 1 N N N N N N -18.965 -9.696 6.376 -4.193 -0.837 -2.831 F21 YUQ 26 YUQ N05 N1 N 0 1 Y N N N N N -22.392 -10.875 11.549 1.183 0.190 1.441 N05 YUQ 27 YUQ N15 N2 N 0 1 N N N N N N -19.177 -11.837 4.560 -6.175 -1.029 -0.912 N15 YUQ 28 YUQ N27 N3 N 0 1 N N N N N N -24.544 -12.259 14.222 4.251 1.365 0.428 N27 YUQ 29 YUQ N33 N4 N 0 1 N N N N N N -30.367 -15.345 15.352 7.221 -4.400 -1.482 N33 YUQ 30 YUQ O08 O1 O 0 1 N N N N N N -22.228 -8.340 10.416 0.588 -2.423 2.653 O08 YUQ 31 YUQ O09 O2 O 0 1 N N N N N N -22.733 -9.349 8.508 -1.430 -2.278 1.732 O09 YUQ 32 YUQ O18 O3 O 0 1 N N N N N N -19.560 -11.653 1.985 -7.205 -0.675 1.264 O18 YUQ 33 YUQ O19 O4 O 0 1 N N N N N N -21.368 -12.342 3.270 -8.597 -0.838 -0.774 O19 YUQ 34 YUQ O35 O5 O 0 1 N N N N N N -26.659 -12.021 13.422 5.351 0.488 -1.330 O35 YUQ 35 YUQ O37 O6 O 0 1 N N N N N N -25.028 -10.574 12.705 4.235 2.433 -1.552 O37 YUQ 36 YUQ S16 S1 S 0 1 N N N N N N -20.210 -11.446 3.271 -7.447 -0.350 -0.098 S16 YUQ 37 YUQ H011 H1 H 0 0 N N N N N N -22.998 -11.805 16.359 4.188 4.037 0.160 H011 YUQ 38 YUQ H013 H2 H 0 0 N N N N N N -22.677 -13.472 15.771 3.484 4.385 1.757 H013 YUQ 39 YUQ H012 H3 H 0 0 N N N N N N -21.438 -12.189 15.556 5.084 3.614 1.639 H012 YUQ 40 YUQ H021 H4 H 0 0 N N N N N N -22.908 -10.987 14.073 3.336 1.954 2.221 H021 YUQ 41 YUQ H121 H5 H 0 0 N N N N N N -21.681 -13.924 7.860 -3.006 0.020 2.171 H121 YUQ 42 YUQ H131 H6 H 0 0 N N N N N N -20.641 -13.871 5.592 -5.312 -0.549 1.536 H131 YUQ 43 YUQ H173 H7 H 0 0 N N N N N N -21.154 -9.553 4.433 -6.297 1.762 0.028 H173 YUQ 44 YUQ H172 H8 H 0 0 N N N N N N -19.758 -9.079 3.407 -7.299 1.645 -1.438 H172 YUQ 45 YUQ H171 H9 H 0 0 N N N N N N -21.355 -9.413 2.654 -8.062 1.966 0.137 H171 YUQ 46 YUQ H221 H10 H 0 0 N N N N N N -20.093 -10.075 8.647 -1.822 -0.216 -1.946 H221 YUQ 47 YUQ H241 H11 H 0 0 N N N N N N -20.938 -14.738 9.969 -1.431 2.705 -1.054 H241 YUQ 48 YUQ H251 H12 H 0 0 N N N N N N -21.444 -15.936 12.069 0.222 4.478 -1.358 H251 YUQ 49 YUQ H261 H13 H 0 0 N N N N N N -22.405 -14.758 14.011 2.448 4.295 -0.330 H261 YUQ 50 YUQ H282 H14 H 0 0 N N N N N N -24.990 -14.319 14.118 4.062 -0.564 1.285 H282 YUQ 51 YUQ H281 H15 H 0 0 N N N N N N -25.169 -13.579 15.745 5.537 0.335 1.761 H281 YUQ 52 YUQ H302 H16 H 0 0 N N N N N N -28.023 -14.134 12.931 7.761 -0.140 -0.408 H302 YUQ 53 YUQ H301 H17 H 0 0 N N N N N N -27.298 -15.194 14.186 7.247 -1.143 1.016 H301 YUQ 54 YUQ H311 H18 H 0 0 N N N N N N -29.469 -13.074 14.512 6.987 -1.837 -1.998 H311 YUQ 55 YUQ H321 H19 H 0 0 N N N N N N -28.431 -15.440 16.122 8.489 -3.198 -0.316 H321 YUQ 56 YUQ H322 H20 H 0 0 N N N N N N -29.498 -14.200 16.864 6.960 -3.662 0.468 H322 YUQ 57 YUQ H342 H21 H 0 0 N N N N N N -27.165 -13.166 16.503 5.007 -2.512 0.295 H342 YUQ 58 YUQ H341 H22 H 0 0 N N N N N N -27.865 -11.740 15.665 4.616 -2.061 -1.422 H341 YUQ 59 YUQ H051 H23 H 0 0 N N N N N N -22.732 -10.174 12.176 1.949 -0.133 1.941 H051 YUQ 60 YUQ H151 H24 H 0 0 N N N N N N -18.769 -12.729 4.364 -6.340 -1.652 -1.637 H151 YUQ 61 YUQ H332 H25 H 0 0 N N N N N N -30.714 -16.028 15.995 7.636 -5.271 -1.188 H332 YUQ 62 YUQ H1 H26 H 0 1 N N N N N N -31.079 -14.666 15.171 6.240 -4.518 -1.690 H1 YUQ 63 YUQ H2 H28 H 0 1 N N N N N N -22.591 -7.594 9.954 0.287 -3.273 3.003 H2 YUQ 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YUQ O18 S16 DOUB N N 1 YUQ O19 S16 DOUB N N 2 YUQ S16 C17 SING N N 3 YUQ S16 N15 SING N N 4 YUQ N15 C14 SING N N 5 YUQ C14 C13 DOUB Y N 6 YUQ C14 C20 SING Y N 7 YUQ C13 C12 SING Y N 8 YUQ F21 C20 SING N N 9 YUQ C20 C22 DOUB Y N 10 YUQ C12 C11 DOUB Y N 11 YUQ C22 C11 SING Y N 12 YUQ C11 C10 SING N N 13 YUQ O09 C07 DOUB N N 14 YUQ C07 C06 SING N N 15 YUQ C07 O08 SING N N 16 YUQ C10 C06 DOUB Y N 17 YUQ C10 C23 SING Y N 18 YUQ C06 N05 SING Y N 19 YUQ C23 C24 DOUB Y N 20 YUQ C23 C04 SING Y N 21 YUQ C24 C25 SING Y N 22 YUQ N05 C04 SING Y N 23 YUQ C04 C03 DOUB Y N 24 YUQ C25 C26 DOUB Y N 25 YUQ O37 C36 DOUB N N 26 YUQ C03 C26 SING Y N 27 YUQ C03 C02 SING N N 28 YUQ C36 O35 SING N N 29 YUQ C36 N27 SING N N 30 YUQ O35 C29 SING N N 31 YUQ C30 C29 SING N N 32 YUQ C30 C31 SING N N 33 YUQ N27 C02 SING N N 34 YUQ N27 C28 SING N N 35 YUQ C02 C01 SING N N 36 YUQ C29 C28 SING N N 37 YUQ C29 C34 SING N N 38 YUQ C31 C34 SING N N 39 YUQ C31 C32 SING N N 40 YUQ N33 C32 SING N N 41 YUQ C01 H011 SING N N 42 YUQ C01 H013 SING N N 43 YUQ C01 H012 SING N N 44 YUQ C02 H021 SING N N 45 YUQ C12 H121 SING N N 46 YUQ C13 H131 SING N N 47 YUQ C17 H173 SING N N 48 YUQ C17 H172 SING N N 49 YUQ C17 H171 SING N N 50 YUQ C22 H221 SING N N 51 YUQ C24 H241 SING N N 52 YUQ C25 H251 SING N N 53 YUQ C26 H261 SING N N 54 YUQ C28 H282 SING N N 55 YUQ C28 H281 SING N N 56 YUQ C30 H302 SING N N 57 YUQ C30 H301 SING N N 58 YUQ C31 H311 SING N N 59 YUQ C32 H321 SING N N 60 YUQ C32 H322 SING N N 61 YUQ C34 H342 SING N N 62 YUQ C34 H341 SING N N 63 YUQ N05 H051 SING N N 64 YUQ N15 H151 SING N N 65 YUQ N33 H332 SING N N 66 YUQ N33 H1 SING N N 67 YUQ O08 H2 SING N N 68 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YUQ InChI InChI 1.06 "InChI=1S/C25H27FN4O6S/c1-13(30-12-25(36-24(30)33)9-14(10-25)11-27)16-4-3-5-17-20(22(23(31)32)28-21(16)17)15-6-7-19(18(26)8-15)29-37(2,34)35/h3-8,13-14,28-29H,9-12,27H2,1-2H3,(H,31,32)/t13-,14-,25-/m0/s1" YUQ InChIKey InChI 1.06 ISQDCJWTIUTKFQ-DZWULXIXSA-N YUQ SMILES_CANONICAL CACTVS 3.385 "C[C@H](N1C[C@]2(C[C@@H](CN)C2)OC1=O)c3cccc4c3[nH]c(C(O)=O)c4c5ccc(N[S](C)(=O)=O)c(F)c5" YUQ SMILES CACTVS 3.385 "C[CH](N1C[C]2(C[CH](CN)C2)OC1=O)c3cccc4c3[nH]c(C(O)=O)c4c5ccc(N[S](C)(=O)=O)c(F)c5" YUQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](c1cccc2c1[nH]c(c2c3ccc(c(c3)F)NS(=O)(=O)C)C(=O)O)N4CC5(CC(C5)CN)OC4=O" YUQ SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1cccc2c1[nH]c(c2c3ccc(c(c3)F)NS(=O)(=O)C)C(=O)O)N4CC5(CC(C5)CN)OC4=O" # _pdbx_chem_comp_identifier.comp_id YUQ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "7-[(1~{S})-1-[2-(aminomethyl)-6-oxidanylidene-5-oxa-7-azaspiro[3.4]octan-7-yl]ethyl]-3-[3-fluoranyl-4-(methylsulfonylamino)phenyl]-1~{H}-indole-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YUQ "Create component" 2023-06-21 PDBE YUQ "Initial release" 2024-07-10 RCSB #