data_YW0 # _chem_comp.id YW0 _chem_comp.name "methyl 2-formyl-2-[4-(undec-10-ynamido)phenyl]hydrazine-1-carboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H27 N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-22 _chem_comp.pdbx_modified_date 2024-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 373.446 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YW0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8T88 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YW0 C10 C1 C 0 1 N N N N N N -24.983 -22.020 -15.024 -2.086 1.505 -0.208 C10 YW0 1 YW0 C13 C2 C 0 1 Y N N N N N -28.214 -18.648 -15.967 1.868 0.363 1.065 C13 YW0 2 YW0 C15 C3 C 0 1 Y N N N N N -28.755 -17.584 -18.045 4.222 0.406 0.607 C15 YW0 3 YW0 C11 C4 C 0 1 N N N N N N -25.317 -20.749 -15.776 -0.686 0.972 -0.046 C11 YW0 4 YW0 C12 C5 C 0 1 Y N N N N N -27.289 -19.469 -16.609 1.663 1.332 0.092 C12 YW0 5 YW0 C14 C6 C 0 1 Y N N N N N -28.920 -17.700 -16.672 3.144 -0.096 1.324 C14 YW0 6 YW0 C16 C7 C 0 1 N N N N N N -29.186 -16.196 -20.030 5.716 -0.996 1.819 C16 YW0 7 YW0 C1 C8 C 0 1 N N N N N N -20.658 -25.238 -8.290 -12.826 -0.494 -0.249 C1 YW0 8 YW0 C17 C9 C 0 1 N N N N N N -31.803 -16.670 -18.168 7.178 -0.299 -0.818 C17 YW0 9 YW0 C18 C10 C 0 1 N N N N N N -32.298 -15.121 -16.352 7.375 -2.279 -2.136 C18 YW0 10 YW0 C19 C11 C 0 1 Y N N N N N -27.905 -18.462 -18.709 4.016 1.370 -0.371 C19 YW0 11 YW0 C2 C12 C 0 1 N N N N N N -19.729 -24.983 -8.998 -11.735 -0.910 -0.123 C2 YW0 12 YW0 C20 C13 C 0 1 Y N N N N N -27.187 -19.404 -17.999 2.741 1.834 -0.626 C20 YW0 13 YW0 C3 C14 C 0 1 N N N N N N -18.758 -24.341 -9.890 -10.367 -1.430 0.035 C3 YW0 14 YW0 C4 C15 C 0 1 N N N N N N -19.369 -23.346 -10.871 -9.363 -0.291 -0.149 C4 YW0 15 YW0 C5 C16 C 0 1 N N N N N N -20.539 -23.896 -11.670 -7.941 -0.832 0.015 C5 YW0 16 YW0 C6 C17 C 0 1 N N N N N N -21.506 -22.835 -12.186 -6.937 0.308 -0.169 C6 YW0 17 YW0 C7 C18 C 0 1 N N N N N N -22.966 -23.078 -11.825 -5.516 -0.233 -0.004 C7 YW0 18 YW0 C8 C19 C 0 1 N N N N N N -23.921 -23.151 -13.009 -4.512 0.906 -0.189 C8 YW0 19 YW0 C9 C20 C 0 1 N N N N N N -24.088 -21.858 -13.804 -3.090 0.365 -0.024 C9 YW0 20 YW0 N1 N1 N 0 1 N N N N N N -26.634 -20.442 -15.814 0.369 1.802 -0.167 N1 YW0 21 YW0 N2 N2 N 0 1 N N N N N N -29.511 -16.603 -18.765 5.516 -0.060 0.869 N2 YW0 22 YW0 N3 N3 N 0 1 N N N N N N -30.608 -16.013 -18.126 6.604 0.447 0.146 N3 YW0 23 YW0 O1 O1 O 0 1 N N N N N N -24.445 -20.001 -16.229 -0.508 -0.204 0.193 O1 YW0 24 YW0 O2 O2 O 0 1 N N N N N N -28.158 -16.446 -20.642 6.837 -1.399 2.046 O2 YW0 25 YW0 O3 O3 O 0 1 N N N N N N -31.995 -17.666 -18.826 8.121 0.140 -1.446 O3 YW0 26 YW0 O4 O4 O 0 1 N N N N N N -32.692 -16.146 -17.301 6.708 -1.532 -1.085 O4 YW0 27 YW0 H17 H1 H 0 1 N N N N N N -25.929 -22.472 -14.690 -2.270 2.276 0.540 H17 YW0 28 YW0 H16 H2 H 0 1 N N N N N N -24.478 -22.702 -15.724 -2.199 1.932 -1.205 H16 YW0 29 YW0 H19 H3 H 0 1 N N N N N N -28.379 -18.757 -14.905 1.030 -0.027 1.623 H19 YW0 30 YW0 H20 H4 H 0 1 N N N N N N -29.605 -17.044 -16.155 3.304 -0.846 2.085 H20 YW0 31 YW0 H21 H5 H 0 1 N N N N N N -29.917 -15.588 -20.543 4.878 -1.386 2.377 H21 YW0 32 YW0 H1 H6 H 0 1 N N N N N N -21.482 -25.464 -7.662 -13.801 -0.123 -0.362 H1 YW0 33 YW0 H24 H7 H 0 1 N N N N N N -33.166 -14.832 -15.742 7.304 -1.729 -3.074 H24 YW0 34 YW0 H25 H8 H 0 1 N N N N N N -31.504 -15.512 -15.698 8.424 -2.417 -1.874 H25 YW0 35 YW0 H23 H9 H 0 1 N N N N N N -31.924 -14.241 -16.897 6.898 -3.253 -2.249 H23 YW0 36 YW0 H26 H10 H 0 1 N N N N N N -27.806 -18.407 -19.783 4.854 1.762 -0.929 H26 YW0 37 YW0 H27 H11 H 0 1 N N N N N N -26.543 -20.095 -18.523 2.581 2.584 -1.386 H27 YW0 38 YW0 H3 H12 H 0 1 N N N N N N -18.249 -25.127 -10.468 -10.254 -1.857 1.031 H3 YW0 39 YW0 H2 H13 H 0 1 N N N N N N -18.022 -23.807 -9.271 -10.183 -2.201 -0.714 H2 YW0 40 YW0 H5 H14 H 0 1 N N N N N N -18.586 -23.033 -11.577 -9.476 0.136 -1.146 H5 YW0 41 YW0 H4 H15 H 0 1 N N N N N N -19.720 -22.472 -10.302 -9.547 0.480 0.599 H4 YW0 42 YW0 H7 H16 H 0 1 N N N N N N -21.100 -24.588 -11.025 -7.828 -1.258 1.012 H7 YW0 43 YW0 H6 H17 H 0 1 N N N N N N -20.137 -24.444 -12.535 -7.757 -1.603 -0.733 H6 YW0 44 YW0 H9 H18 H 0 1 N N N N N N -21.425 -22.801 -13.282 -7.051 0.735 -1.165 H9 YW0 45 YW0 H8 H19 H 0 1 N N N N N N -21.206 -21.864 -11.766 -7.121 1.079 0.580 H8 YW0 46 YW0 H11 H20 H 0 1 N N N N N N -23.296 -22.258 -11.171 -5.402 -0.660 0.992 H11 YW0 47 YW0 H10 H21 H 0 1 N N N N N N -23.028 -24.030 -11.278 -5.332 -1.004 -0.753 H10 YW0 48 YW0 H13 H22 H 0 1 N N N N N N -24.910 -23.444 -12.628 -4.625 1.333 -1.185 H13 YW0 49 YW0 H12 H23 H 0 1 N N N N N N -23.549 -23.925 -13.696 -4.696 1.677 0.560 H12 YW0 50 YW0 H15 H24 H 0 1 N N N N N N -23.096 -21.523 -14.140 -2.906 -0.405 -0.773 H15 YW0 51 YW0 H14 H25 H 0 1 N N N N N N -24.529 -21.096 -13.145 -2.977 -0.061 0.972 H14 YW0 52 YW0 H18 H26 H 0 1 N N N N N N -27.222 -20.970 -15.201 0.233 2.724 -0.434 H18 YW0 53 YW0 H22 H27 H 0 1 N N N N N N -30.518 -15.136 -17.653 6.943 1.335 0.338 H22 YW0 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YW0 O2 C16 DOUB N N 1 YW0 C16 N2 SING N N 2 YW0 O3 C17 DOUB N N 3 YW0 N2 N3 SING N N 4 YW0 N2 C15 SING N N 5 YW0 C19 C15 DOUB Y N 6 YW0 C19 C20 SING Y N 7 YW0 C17 N3 SING N N 8 YW0 C17 O4 SING N N 9 YW0 C15 C14 SING Y N 10 YW0 C20 C12 DOUB Y N 11 YW0 O4 C18 SING N N 12 YW0 C14 C13 DOUB Y N 13 YW0 C12 C13 SING Y N 14 YW0 C12 N1 SING N N 15 YW0 O1 C11 DOUB N N 16 YW0 N1 C11 SING N N 17 YW0 C11 C10 SING N N 18 YW0 C10 C9 SING N N 19 YW0 C9 C8 SING N N 20 YW0 C8 C7 SING N N 21 YW0 C6 C7 SING N N 22 YW0 C6 C5 SING N N 23 YW0 C5 C4 SING N N 24 YW0 C4 C3 SING N N 25 YW0 C3 C2 SING N N 26 YW0 C2 C1 TRIP N N 27 YW0 C10 H17 SING N N 28 YW0 C10 H16 SING N N 29 YW0 C13 H19 SING N N 30 YW0 C14 H20 SING N N 31 YW0 C16 H21 SING N N 32 YW0 C1 H1 SING N N 33 YW0 C18 H24 SING N N 34 YW0 C18 H25 SING N N 35 YW0 C18 H23 SING N N 36 YW0 C19 H26 SING N N 37 YW0 C20 H27 SING N N 38 YW0 C3 H3 SING N N 39 YW0 C3 H2 SING N N 40 YW0 C4 H5 SING N N 41 YW0 C4 H4 SING N N 42 YW0 C5 H7 SING N N 43 YW0 C5 H6 SING N N 44 YW0 C6 H9 SING N N 45 YW0 C6 H8 SING N N 46 YW0 C7 H11 SING N N 47 YW0 C7 H10 SING N N 48 YW0 C8 H13 SING N N 49 YW0 C8 H12 SING N N 50 YW0 C9 H15 SING N N 51 YW0 C9 H14 SING N N 52 YW0 N1 H18 SING N N 53 YW0 N3 H22 SING N N 54 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YW0 SMILES ACDLabs 12.01 "C#CCCCCCCCCC(=O)Nc1ccc(cc1)N(NC(=O)OC)C=O" YW0 InChI InChI 1.06 "InChI=1S/C20H27N3O4/c1-3-4-5-6-7-8-9-10-11-19(25)21-17-12-14-18(15-13-17)23(16-24)22-20(26)27-2/h1,12-16H,4-11H2,2H3,(H,21,25)(H,22,26)" YW0 InChIKey InChI 1.06 DVKLBCMFIZWEBE-UHFFFAOYSA-N YW0 SMILES_CANONICAL CACTVS 3.385 "COC(=O)NN(C=O)c1ccc(NC(=O)CCCCCCCCC#C)cc1" YW0 SMILES CACTVS 3.385 "COC(=O)NN(C=O)c1ccc(NC(=O)CCCCCCCCC#C)cc1" YW0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COC(=O)NN(C=O)c1ccc(cc1)NC(=O)CCCCCCCCC#C" YW0 SMILES "OpenEye OEToolkits" 2.0.7 "COC(=O)NN(C=O)c1ccc(cc1)NC(=O)CCCCCCCCC#C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YW0 "SYSTEMATIC NAME" ACDLabs 12.01 "methyl 2-formyl-2-[4-(undec-10-ynamido)phenyl]hydrazine-1-carboxylate" YW0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "methyl ~{N}-[methanoyl-[4-(undec-10-ynoylamino)phenyl]amino]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YW0 "Create component" 2023-06-22 RCSB YW0 "Initial release" 2024-03-06 RCSB #