data_YWM # _chem_comp.id YWM _chem_comp.name "diethyl [(4-{(2S,3R)-2-[({[(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl]oxy}carbonyl)amino]-3-hydroxy-4-[{4-[(1S)-1-hydroxyethyl]benzene-1-sulfonyl}(2-methylpropyl)amino]butyl}phenoxy)methyl]phosphonate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C34 H51 N2 O12 P S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-04-02 _chem_comp.pdbx_modified_date 2022-04-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 742.814 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YWM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7M9N _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YWM C13 C1 C 0 1 N N R 20.369 -0.429 14.905 2.126 -1.676 0.389 C13 YWM 1 YWM C15 C2 C 0 1 N N S 20.037 -0.125 16.351 0.663 -1.782 0.822 C15 YWM 2 YWM C17 C3 C 0 1 N N N 21.987 0.468 17.907 0.315 0.629 0.814 C17 YWM 3 YWM C20 C4 C 0 1 N N R 23.775 1.292 19.450 0.030 2.993 0.641 C20 YWM 4 YWM C21 C5 C 0 1 N N N 24.973 1.713 19.169 -1.333 3.322 -0.008 C21 YWM 5 YWM C24 C6 C 0 1 N N R 23.944 3.588 20.138 -0.951 5.093 1.419 C24 YWM 6 YWM C26 C7 C 0 1 N N N 21.704 3.723 19.513 -0.378 5.002 3.699 C26 YWM 7 YWM C28 C8 C 0 1 N N N 18.683 0.581 16.450 -0.218 -2.017 -0.407 C28 YWM 8 YWM C01 C9 C 0 1 Y N N 15.701 -6.038 13.354 4.475 1.051 -3.465 C01 YWM 9 YWM C02 C10 C 0 1 Y N N 15.549 -4.529 13.433 3.540 1.451 -2.529 C02 YWM 10 YWM C03 C11 C 0 1 Y N N 16.503 -3.732 14.328 3.734 1.162 -1.191 C03 YWM 11 YWM C04 C12 C 0 1 Y N N 17.567 -4.488 15.107 4.864 0.473 -0.790 C04 YWM 12 YWM C05 C13 C 0 1 Y N N 17.733 -5.977 15.042 5.799 0.074 -1.726 C05 YWM 13 YWM C06 C14 C 0 1 Y N N 16.779 -6.762 14.122 5.604 0.362 -3.064 C06 YWM 14 YWM C11 C15 C 0 1 N N N 20.624 -3.871 14.265 5.194 -2.595 1.051 C11 YWM 15 YWM C12 C16 C 0 1 N N N 19.471 -1.591 14.418 3.007 -1.441 1.618 C12 YWM 16 YWM C23 C17 C 0 1 N N S 23.279 2.247 20.551 0.313 4.200 1.556 C23 YWM 17 YWM C25 C18 C 0 1 N N N 21.946 2.466 20.502 0.234 3.743 3.034 C25 YWM 18 YWM C29 C19 C 0 1 Y N N 18.487 1.014 17.919 -1.642 -2.244 0.031 C29 YWM 19 YWM C30 C20 C 0 1 Y N N 18.340 -0.045 19.006 -2.082 -3.524 0.311 C30 YWM 20 YWM C31 C21 C 0 1 Y N N 18.173 0.370 20.447 -3.387 -3.735 0.712 C31 YWM 21 YWM C32 C22 C 0 1 Y N N 18.184 1.857 20.803 -4.256 -2.661 0.835 C32 YWM 22 YWM C33 C23 C 0 1 Y N N 18.357 2.900 19.731 -3.812 -1.377 0.554 C33 YWM 23 YWM C34 C24 C 0 1 Y N N 18.508 2.485 18.273 -2.504 -1.171 0.158 C34 YWM 24 YWM C36 C25 C 0 1 N N N 22.169 -3.528 14.226 5.460 -3.207 2.427 C36 YWM 25 YWM C37 C26 C 0 1 N N N 22.861 -4.567 13.306 6.200 -4.536 2.260 C37 YWM 26 YWM C38 C27 C 0 1 N N N 22.707 -3.582 15.656 6.317 -2.248 3.256 C38 YWM 27 YWM C39 C28 C 0 1 N N S 14.744 -6.873 12.425 4.260 1.360 -4.924 C39 YWM 28 YWM C40 C29 C 0 1 N N N 18.482 1.344 23.094 -6.378 -1.713 1.334 C40 YWM 29 YWM C44 C30 C 0 1 N N N 16.558 4.013 24.837 -8.420 0.760 -1.348 C44 YWM 30 YWM C45 C31 C 0 1 N N N 18.412 -0.178 25.871 -5.559 -0.407 -2.551 C45 YWM 31 YWM C46 C32 C 0 1 N N N 15.204 4.274 25.535 -9.243 1.963 -0.885 C46 YWM 32 YWM C47 C33 C 0 1 N N N 19.097 -1.070 26.951 -4.136 -0.120 -3.034 C47 YWM 33 YWM C49 C34 C 0 1 N N N 14.477 -8.207 13.033 3.600 0.161 -5.608 C49 YWM 34 YWM N10 N1 N 0 1 N N N 19.877 -2.859 15.068 4.410 -1.367 1.206 N10 YWM 35 YWM N16 N2 N 0 1 N N N 21.025 0.812 16.871 0.257 -0.539 1.483 N16 YWM 36 YWM O08 O1 O 0 1 N N N 19.332 -4.391 17.158 6.510 -0.076 1.088 O08 YWM 37 YWM O09 O2 O 0 1 N N N 17.967 -2.479 16.839 4.355 1.061 1.646 O09 YWM 38 YWM O14 O3 O 0 1 N N N 20.197 0.688 14.137 2.521 -2.888 -0.256 O14 YWM 39 YWM O18 O4 O 0 1 N N N 22.019 -0.617 18.455 0.702 0.652 -0.337 O18 YWM 40 YWM O19 O5 O 0 1 N N N 22.902 1.497 18.240 -0.058 1.772 1.422 O19 YWM 41 YWM O22 O6 O 0 1 N N N 24.756 3.325 19.146 -1.981 4.207 0.928 O22 YWM 42 YWM O27 O7 O 0 1 N N N 22.785 4.500 19.644 -1.301 5.534 2.737 O27 YWM 43 YWM O35 O8 O 0 1 N N N 18.005 2.253 22.154 -5.540 -2.866 1.229 O35 YWM 44 YWM O42 O9 O 0 1 N N N 16.921 2.692 25.051 -7.797 0.145 -0.218 O42 YWM 45 YWM O43 O10 O 0 1 N N N 18.966 1.112 25.901 -5.529 -0.780 -1.172 O43 YWM 46 YWM O48 O11 O 0 1 N N N 19.344 3.344 24.715 -7.586 -2.236 -1.029 O48 YWM 47 YWM O50 O12 O 0 1 N N N 15.460 -6.979 11.247 5.518 1.629 -5.545 O50 YWM 48 YWM P41 P1 P 0 1 N N N 18.459 2.194 24.740 -6.852 -1.153 -0.335 P41 YWM 49 YWM S07 S1 S 0 1 N N N 18.704 -3.533 16.154 5.111 0.105 0.915 S07 YWM 50 YWM H131 H1 H 0 0 N N N 21.414 -0.768 14.856 2.240 -0.842 -0.304 H131 YWM 51 YWM H151 H2 H 0 0 N N N 20.022 -1.053 16.942 0.549 -2.616 1.515 H151 YWM 52 YWM H201 H3 H 0 0 N N N 23.729 0.249 19.796 0.803 2.902 -0.122 H201 YWM 53 YWM H212 H4 H 0 0 N N N 25.311 1.339 18.191 -1.186 3.823 -0.965 H212 YWM 54 YWM H211 H5 H 0 0 N N N 25.695 1.416 19.944 -1.919 2.413 -0.142 H211 YWM 55 YWM H241 H6 H 0 0 N N N 24.437 4.046 21.008 -0.784 5.931 0.743 H241 YWM 56 YWM H262 H7 H 0 0 N N N 20.798 4.273 19.807 -0.898 4.749 4.623 H262 YWM 57 YWM H261 H8 H 0 0 N N N 21.603 3.379 18.473 0.418 5.720 3.897 H261 YWM 58 YWM H282 H9 H 0 0 N N N 18.672 1.464 15.794 -0.173 -1.144 -1.058 H282 YWM 59 YWM H281 H10 H 0 0 N N N 17.879 -0.107 16.152 0.140 -2.893 -0.948 H281 YWM 60 YWM H021 H11 H 0 0 N N N 14.780 -4.025 12.867 2.658 1.989 -2.842 H021 YWM 61 YWM H031 H12 H 0 0 N N N 16.422 -2.658 14.404 3.004 1.475 -0.459 H031 YWM 62 YWM H051 H13 H 0 0 N N N 18.494 -6.481 15.619 6.681 -0.464 -1.412 H051 YWM 63 YWM H061 H14 H 0 0 N N N 16.882 -7.833 14.027 6.335 0.050 -3.796 H061 YWM 64 YWM H111 H15 H 0 0 N N N 20.230 -3.879 13.238 6.143 -2.362 0.567 H111 YWM 65 YWM H112 H16 H 0 0 N N N 20.486 -4.864 14.718 4.639 -3.306 0.438 H112 YWM 66 YWM H122 H17 H 0 0 N N N 18.423 -1.372 14.672 2.719 -0.506 2.098 H122 YWM 67 YWM H121 H18 H 0 0 N N N 19.570 -1.694 13.327 2.877 -2.265 2.320 H121 YWM 68 YWM H231 H19 H 0 0 N N N 23.640 1.924 21.539 1.238 4.718 1.304 H231 YWM 69 YWM H252 H20 H 0 0 N N N 21.565 2.699 21.507 1.226 3.531 3.434 H252 YWM 70 YWM H251 H21 H 0 0 N N N 21.432 1.575 20.112 -0.425 2.882 3.145 H251 YWM 71 YWM H301 H22 H 0 0 N N N 18.355 -1.093 18.744 -1.405 -4.361 0.216 H301 YWM 72 YWM H311 H23 H 0 0 N N N 18.047 -0.375 21.219 -3.730 -4.736 0.930 H311 YWM 73 YWM H331 H24 H 0 0 N N N 18.374 3.947 19.997 -4.486 -0.539 0.649 H331 YWM 74 YWM H341 H25 H 0 0 N N N 18.629 3.231 17.502 -2.157 -0.171 -0.056 H341 YWM 75 YWM H361 H26 H 0 0 N N N 22.306 -2.518 13.812 4.513 -3.381 2.937 H361 YWM 76 YWM H373 H27 H 0 0 N N N 23.939 -4.355 13.258 7.148 -4.363 1.750 H373 YWM 77 YWM H371 H28 H 0 0 N N N 22.704 -5.577 13.711 6.390 -4.973 3.241 H371 YWM 78 YWM H372 H29 H 0 0 N N N 22.430 -4.506 12.296 5.590 -5.220 1.670 H372 YWM 79 YWM H382 H30 H 0 0 N N N 22.190 -2.831 16.271 7.265 -2.074 2.746 H382 YWM 80 YWM H381 H31 H 0 0 N N N 22.532 -4.584 16.076 5.790 -1.301 3.375 H381 YWM 81 YWM H383 H32 H 0 0 N N N 23.786 -3.371 15.650 6.506 -2.684 4.236 H383 YWM 82 YWM H391 H33 H 0 0 N N N 13.803 -6.321 12.286 3.614 2.233 -5.019 H391 YWM 83 YWM H401 H34 H 0 0 N N N 17.835 0.455 23.120 -7.275 -1.966 1.900 H401 YWM 84 YWM H402 H35 H 0 0 N N N 19.509 1.043 22.840 -5.838 -0.916 1.844 H402 YWM 85 YWM H442 H36 H 0 0 N N N 17.325 4.680 25.256 -9.074 0.039 -1.839 H442 YWM 86 YWM H441 H37 H 0 0 N N N 16.460 4.200 23.757 -7.654 1.091 -2.049 H441 YWM 87 YWM H451 H38 H 0 0 N N N 17.333 -0.117 26.077 -6.171 0.487 -2.672 H451 YWM 88 YWM H452 H39 H 0 0 N N N 18.571 -0.621 24.877 -5.985 -1.221 -3.139 H452 YWM 89 YWM H463 H40 H 0 0 N N N 14.903 5.320 25.373 -9.717 2.432 -1.746 H463 YWM 90 YWM H462 H41 H 0 0 N N N 14.440 3.604 25.115 -10.009 1.632 -0.184 H462 YWM 91 YWM H461 H42 H 0 0 N N N 15.305 4.084 26.614 -8.588 2.684 -0.394 H461 YWM 92 YWM H473 H43 H 0 0 N N N 18.660 -2.079 26.924 -3.711 0.694 -2.447 H473 YWM 93 YWM H471 H44 H 0 0 N N N 20.176 -1.132 26.745 -3.524 -1.013 -2.913 H471 YWM 94 YWM H472 H45 H 0 0 N N N 18.938 -0.628 27.946 -4.159 0.165 -4.086 H472 YWM 95 YWM H493 H46 H 0 0 N N N 13.907 -8.078 13.965 2.640 -0.045 -5.135 H493 YWM 96 YWM H491 H47 H 0 0 N N N 13.895 -8.821 12.329 3.444 0.384 -6.663 H491 YWM 97 YWM H492 H48 H 0 0 N N N 15.432 -8.707 13.253 4.246 -0.712 -5.513 H492 YWM 98 YWM H161 H49 H 0 0 N N N 21.043 1.739 16.496 -0.052 -0.557 2.402 H161 YWM 99 YWM H141 H50 H 0 0 N N N 20.759 1.383 14.458 2.446 -3.674 0.303 H141 YWM 100 YWM H501 H51 H 0 0 N N N 15.611 -6.112 10.889 6.145 0.894 -5.498 H501 YWM 101 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YWM O50 C39 SING N N 1 YWM C39 C49 SING N N 2 YWM C39 C01 SING N N 3 YWM C37 C36 SING N N 4 YWM C01 C02 DOUB Y N 5 YWM C01 C06 SING Y N 6 YWM C02 C03 SING Y N 7 YWM C06 C05 DOUB Y N 8 YWM O14 C13 SING N N 9 YWM C36 C11 SING N N 10 YWM C36 C38 SING N N 11 YWM C11 N10 SING N N 12 YWM C03 C04 DOUB Y N 13 YWM C12 C13 SING N N 14 YWM C12 N10 SING N N 15 YWM C13 C15 SING N N 16 YWM C05 C04 SING Y N 17 YWM N10 S07 SING N N 18 YWM C04 S07 SING N N 19 YWM S07 O09 DOUB N N 20 YWM S07 O08 DOUB N N 21 YWM C15 C28 SING N N 22 YWM C15 N16 SING N N 23 YWM C28 C29 SING N N 24 YWM N16 C17 SING N N 25 YWM C17 O19 SING N N 26 YWM C17 O18 DOUB N N 27 YWM C29 C34 DOUB Y N 28 YWM C29 C30 SING Y N 29 YWM O19 C20 SING N N 30 YWM C34 C33 SING Y N 31 YWM C30 C31 DOUB Y N 32 YWM O22 C21 SING N N 33 YWM O22 C24 SING N N 34 YWM C21 C20 SING N N 35 YWM C20 C23 SING N N 36 YWM C26 O27 SING N N 37 YWM C26 C25 SING N N 38 YWM O27 C24 SING N N 39 YWM C33 C32 DOUB Y N 40 YWM C24 C23 SING N N 41 YWM C31 C32 SING Y N 42 YWM C25 C23 SING N N 43 YWM C32 O35 SING N N 44 YWM O35 C40 SING N N 45 YWM C40 P41 SING N N 46 YWM O48 P41 DOUB N N 47 YWM P41 O42 SING N N 48 YWM P41 O43 SING N N 49 YWM C44 O42 SING N N 50 YWM C44 C46 SING N N 51 YWM C45 O43 SING N N 52 YWM C45 C47 SING N N 53 YWM C13 H131 SING N N 54 YWM C15 H151 SING N N 55 YWM C20 H201 SING N N 56 YWM C21 H212 SING N N 57 YWM C21 H211 SING N N 58 YWM C24 H241 SING N N 59 YWM C26 H262 SING N N 60 YWM C26 H261 SING N N 61 YWM C28 H282 SING N N 62 YWM C28 H281 SING N N 63 YWM C02 H021 SING N N 64 YWM C03 H031 SING N N 65 YWM C05 H051 SING N N 66 YWM C06 H061 SING N N 67 YWM C11 H111 SING N N 68 YWM C11 H112 SING N N 69 YWM C12 H122 SING N N 70 YWM C12 H121 SING N N 71 YWM C23 H231 SING N N 72 YWM C25 H252 SING N N 73 YWM C25 H251 SING N N 74 YWM C30 H301 SING N N 75 YWM C31 H311 SING N N 76 YWM C33 H331 SING N N 77 YWM C34 H341 SING N N 78 YWM C36 H361 SING N N 79 YWM C37 H373 SING N N 80 YWM C37 H371 SING N N 81 YWM C37 H372 SING N N 82 YWM C38 H382 SING N N 83 YWM C38 H381 SING N N 84 YWM C38 H383 SING N N 85 YWM C39 H391 SING N N 86 YWM C40 H401 SING N N 87 YWM C40 H402 SING N N 88 YWM C44 H442 SING N N 89 YWM C44 H441 SING N N 90 YWM C45 H451 SING N N 91 YWM C45 H452 SING N N 92 YWM C46 H463 SING N N 93 YWM C46 H462 SING N N 94 YWM C46 H461 SING N N 95 YWM C47 H473 SING N N 96 YWM C47 H471 SING N N 97 YWM C47 H472 SING N N 98 YWM C49 H493 SING N N 99 YWM C49 H491 SING N N 100 YWM C49 H492 SING N N 101 YWM N16 H161 SING N N 102 YWM O14 H141 SING N N 103 YWM O50 H501 SING N N 104 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YWM SMILES ACDLabs 12.01 "CC(O)c1ccc(cc1)S(=O)(=O)N(CC(C)C)CC(O)C(Cc1ccc(OCP(=O)(OCC)OCC)cc1)NC(=O)OC1COC2OCCC12" YWM InChI InChI 1.03 "InChI=1S/C34H51N2O12PS/c1-6-46-49(40,47-7-2)22-45-27-12-8-25(9-13-27)18-30(35-34(39)48-32-21-44-33-29(32)16-17-43-33)31(38)20-36(19-23(3)4)50(41,42)28-14-10-26(11-15-28)24(5)37/h8-15,23-24,29-33,37-38H,6-7,16-22H2,1-5H3,(H,35,39)/t24-,29-,30-,31+,32-,33+/m0/s1" YWM InChIKey InChI 1.03 STYGPCKGGKFCCM-NRCXORKASA-N YWM SMILES_CANONICAL CACTVS 3.385 "CCO[P](=O)(COc1ccc(C[C@H](NC(=O)O[C@H]2CO[C@H]3OCC[C@@H]23)[C@H](O)CN(CC(C)C)[S](=O)(=O)c4ccc(cc4)[C@H](C)O)cc1)OCC" YWM SMILES CACTVS 3.385 "CCO[P](=O)(COc1ccc(C[CH](NC(=O)O[CH]2CO[CH]3OCC[CH]23)[CH](O)CN(CC(C)C)[S](=O)(=O)c4ccc(cc4)[CH](C)O)cc1)OCC" YWM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCOP(=O)(COc1ccc(cc1)C[C@@H]([C@@H](CN(CC(C)C)S(=O)(=O)c2ccc(cc2)[C@H](C)O)O)NC(=O)O[C@H]3CO[C@@H]4[C@H]3CCO4)OCC" YWM SMILES "OpenEye OEToolkits" 2.0.7 "CCOP(=O)(COc1ccc(cc1)CC(C(CN(CC(C)C)S(=O)(=O)c2ccc(cc2)C(C)O)O)NC(=O)OC3COC4C3CCO4)OCC" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YWM "SYSTEMATIC NAME" ACDLabs 12.01 "diethyl [(4-{(2S,3R)-2-[({[(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl]oxy}carbonyl)amino]-3-hydroxy-4-[{4-[(1S)-1-hydroxyethyl]benzene-1-sulfonyl}(2-methylpropyl)amino]butyl}phenoxy)methyl]phosphonate" YWM "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(3~{a}~{S},4~{R},6~{a}~{R})-2,3,3~{a},4,5,6~{a}-hexahydrofuro[2,3-b]furan-4-yl] ~{N}-[(2~{S},3~{R})-1-[4-(diethoxyphosphorylmethoxy)phenyl]-4-[2-methylpropyl-[4-[(1~{S})-1-oxidanylethyl]phenyl]sulfonyl-amino]-3-oxidanyl-butan-2-yl]carbamate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YWM "Create component" 2021-04-02 RCSB YWM "Initial release" 2022-04-20 RCSB ##