data_YWS # _chem_comp.id YWS _chem_comp.name "diethyl ({4-[(2S,3R)-2-[({[(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl]oxy}carbonyl)amino]-3-hydroxy-4-({4-[(1S)-1-hydroxyethyl]benzene-1-sulfonyl}[(2S)-2-methylbutyl]amino)butyl]phenoxy}methyl)phosphonate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C35 H53 N2 O12 P S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-04-02 _chem_comp.pdbx_modified_date 2022-04-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 756.840 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YWS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7M9P _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YWS C13 C1 C 0 1 N N R 20.271 -0.530 15.043 1.444 1.047 1.420 C13 YWS 1 YWS C15 C2 C 0 1 N N S 19.877 -0.156 16.472 0.221 1.299 0.536 C15 YWS 2 YWS C17 C3 C 0 1 N N N 21.887 0.339 17.977 -0.456 -1.042 0.524 C17 YWS 3 YWS C20 C4 C 0 1 N N R 23.491 1.290 19.467 -1.118 -3.329 0.687 C20 YWS 4 YWS C21 C5 C 0 1 N N N 24.932 1.738 18.966 -2.647 -3.432 0.875 C21 YWS 5 YWS C24 C6 C 0 1 N N R 23.779 3.619 20.032 -2.099 -5.347 -0.285 C24 YWS 6 YWS C26 C7 C 0 1 N N N 21.467 3.665 19.498 -0.834 -5.517 -2.262 C26 YWS 7 YWS C28 C8 C 0 1 N N N 18.549 0.604 16.469 -0.956 1.741 1.408 C28 YWS 8 YWS C01 C9 C 0 1 Y N N 15.682 -6.264 13.495 7.908 1.220 -1.675 C01 YWS 9 YWS C02 C10 C 0 1 Y N N 15.478 -4.788 13.491 6.760 1.980 -1.794 C02 YWS 10 YWS C03 C11 C 0 1 Y N N 16.331 -3.889 14.346 5.850 2.026 -0.754 C03 YWS 11 YWS C04 C12 C 0 1 Y N N 17.393 -4.525 15.166 6.089 1.312 0.405 C04 YWS 12 YWS C05 C13 C 0 1 Y N N 17.634 -5.985 15.185 7.239 0.552 0.525 C05 YWS 13 YWS C06 C14 C 0 1 Y N N 16.771 -6.869 14.326 8.148 0.506 -0.516 C06 YWS 14 YWS C11 C15 C 0 1 N N N 20.476 -4.020 14.433 3.851 -1.098 1.972 C11 YWS 15 YWS C12 C16 C 0 1 N N N 19.313 -1.600 14.563 2.621 0.605 0.549 C12 YWS 16 YWS C23 C17 C 0 1 N N S 23.063 2.173 20.419 -0.740 -4.633 -0.042 C23 YWS 17 YWS C25 C18 C 0 1 N N N 21.730 2.457 20.438 -0.286 -4.293 -1.484 C25 YWS 18 YWS C29 C19 C 0 1 Y N N 18.362 1.010 17.942 -2.123 2.107 0.527 C29 YWS 19 YWS C30 C20 C 0 1 Y N N 18.116 -0.047 18.977 -2.264 3.405 0.072 C30 YWS 20 YWS C31 C21 C 0 1 Y N N 17.974 0.388 20.431 -3.333 3.743 -0.735 C31 YWS 21 YWS C32 C22 C 0 1 Y N N 18.068 1.863 20.777 -4.266 2.779 -1.089 C32 YWS 22 YWS C33 C23 C 0 1 Y N N 18.306 2.902 19.735 -4.122 1.477 -0.631 C33 YWS 23 YWS C34 C24 C 0 1 Y N N 18.451 2.478 18.283 -3.048 1.143 0.171 C34 YWS 24 YWS C36 C25 C 0 1 N N N 22.333 -6.033 13.819 4.026 -4.551 0.282 C36 YWS 25 YWS C37 C26 C 0 1 N N S 21.969 -3.598 14.482 4.018 -2.117 0.842 C37 YWS 26 YWS C38 C27 C 0 1 N N N 22.723 -4.581 13.534 3.984 -3.532 1.422 C38 YWS 27 YWS C39 C28 C 0 1 N N N 22.480 -3.464 15.883 5.358 -1.885 0.141 C39 YWS 28 YWS C40 C29 C 0 1 N N S 14.825 -7.141 12.600 8.896 1.164 -2.811 C40 YWS 29 YWS C41 C30 C 0 1 N N N 18.313 1.339 23.031 -6.239 2.065 -2.206 C41 YWS 30 YWS C45 C31 C 0 1 N N N 16.412 4.275 24.677 -9.351 0.094 -0.230 C45 YWS 31 YWS C46 C32 C 0 1 N N N 18.069 -0.083 25.758 -6.874 0.990 1.783 C46 YWS 32 YWS C47 C33 C 0 1 N N N 15.041 4.442 25.357 -10.152 -1.032 -0.886 C47 YWS 33 YWS C48 C34 C 0 1 N N N 18.425 -0.927 27.005 -5.730 0.569 2.708 C48 YWS 34 YWS C50 C35 C 0 1 N N N 14.971 -8.608 12.927 9.855 2.353 -2.712 C50 YWS 35 YWS N10 N1 N 0 1 N N N 19.709 -2.942 15.162 3.756 0.249 1.405 N10 YWS 36 YWS N16 N2 N 0 1 N N N 20.941 0.724 16.920 -0.132 0.066 -0.172 N16 YWS 37 YWS O08 O1 O 0 1 N N N 19.128 -4.408 17.126 5.617 0.907 2.885 O08 YWS 38 YWS O09 O2 O 0 1 N N N 17.684 -2.396 16.606 4.302 2.642 1.659 O09 YWS 39 YWS O14 O3 O 0 1 N N N 20.090 0.556 14.196 1.788 2.250 2.111 O14 YWS 40 YWS O18 O4 O 0 1 N N N 21.938 -0.742 18.514 -0.455 -1.018 1.739 O18 YWS 41 YWS O19 O5 O 0 1 N N N 22.742 1.439 18.287 -0.780 -2.175 -0.127 O19 YWS 42 YWS O22 O6 O 0 1 N N N 24.651 3.309 19.013 -3.091 -4.303 -0.185 O22 YWS 43 YWS O27 O7 O 0 1 N N N 22.848 4.459 19.624 -2.078 -5.849 -1.627 O27 YWS 44 YWS O35 O8 O 0 1 N N N 17.901 2.301 22.109 -5.319 3.109 -1.882 O35 YWS 45 YWS O43 O9 O 0 1 N N N 16.690 2.871 24.661 -8.324 0.531 -1.122 O43 YWS 46 YWS O44 O10 O 0 1 N N N 18.638 1.198 25.785 -6.360 1.242 0.474 O44 YWS 47 YWS O49 O11 O 0 1 N N N 19.129 3.433 24.742 -8.037 2.926 -0.378 O49 YWS 48 YWS O51 O12 O 0 1 N N N 15.421 -6.957 11.327 8.196 1.221 -4.055 O51 YWS 49 YWS P42 P1 P 0 1 N N N 18.225 2.311 24.645 -7.287 1.707 -0.757 P42 YWS 50 YWS S07 S1 S 0 1 N N N 18.469 -3.518 16.177 4.930 1.370 1.731 S07 YWS 51 YWS H131 H1 H 0 0 N N N 21.305 -0.906 15.022 1.214 0.265 2.144 H131 YWS 52 YWS H151 H2 H 0 0 N N N 19.804 -1.056 17.100 0.451 2.081 -0.188 H151 YWS 53 YWS H201 H3 H 0 0 N N N 23.524 0.249 19.821 -0.617 -3.273 1.653 H201 YWS 54 YWS H212 H4 H 0 0 N N N 25.159 1.378 17.952 -2.882 -3.867 1.847 H212 YWS 55 YWS H211 H5 H 0 0 N N N 25.734 1.430 19.653 -3.109 -2.449 0.777 H211 YWS 56 YWS H241 H6 H 0 0 N N N 24.311 3.979 20.925 -2.274 -6.142 0.441 H241 YWS 57 YWS H261 H7 H 0 0 N N N 20.619 4.272 19.848 -0.997 -5.278 -3.312 H261 YWS 58 YWS H262 H8 H 0 0 N N N 21.282 3.339 18.464 -0.128 -6.342 -2.166 H262 YWS 59 YWS H282 H9 H 0 0 N N N 18.605 1.491 15.821 -1.243 0.926 2.071 H282 YWS 60 YWS H281 H10 H 0 0 N N N 17.726 -0.044 16.133 -0.663 2.607 2.001 H281 YWS 61 YWS H021 H11 H 0 0 N N N 14.709 -4.358 12.867 6.573 2.537 -2.700 H021 YWS 62 YWS H031 H12 H 0 0 N N N 16.176 -2.820 14.362 4.953 2.620 -0.847 H031 YWS 63 YWS H051 H13 H 0 0 N N N 18.413 -6.407 15.803 7.426 -0.005 1.431 H051 YWS 64 YWS H061 H14 H 0 0 N N N 16.936 -7.936 14.309 9.045 -0.087 -0.422 H061 YWS 65 YWS H111 H15 H 0 0 N N N 20.134 -4.092 13.390 2.943 -1.322 2.532 H111 YWS 66 YWS H112 H16 H 0 0 N N N 20.337 -4.990 14.932 4.712 -1.151 2.639 H112 YWS 67 YWS H121 H17 H 0 0 N N N 18.291 -1.345 14.879 2.329 -0.261 -0.045 H121 YWS 68 YWS H122 H18 H 0 0 N N N 19.353 -1.662 13.465 2.908 1.420 -0.115 H122 YWS 69 YWS H231 H19 H 0 0 N N N 23.424 1.886 21.418 -0.025 -5.240 0.512 H231 YWS 70 YWS H251 H20 H 0 0 N N N 21.420 2.710 21.462 0.800 -4.240 -1.552 H251 YWS 71 YWS H252 H21 H 0 0 N N N 21.160 1.584 20.088 -0.746 -3.368 -1.833 H252 YWS 72 YWS H301 H22 H 0 0 N N N 18.041 -1.088 18.700 -1.538 4.155 0.348 H301 YWS 73 YWS H311 H23 H 0 0 N N N 17.808 -0.345 21.206 -3.444 4.757 -1.089 H311 YWS 74 YWS H331 H24 H 0 0 N N N 18.375 3.944 20.009 -4.846 0.725 -0.905 H331 YWS 75 YWS H341 H25 H 0 0 N N N 18.615 3.213 17.509 -2.933 0.128 0.524 H341 YWS 76 YWS H362 H26 H 0 0 N N N 22.879 -6.701 13.137 4.942 -4.416 -0.292 H362 YWS 77 YWS H363 H27 H 0 0 N N N 22.588 -6.284 14.859 4.002 -5.560 0.696 H363 YWS 78 YWS H361 H28 H 0 0 N N N 21.251 -6.159 13.666 3.164 -4.405 -0.368 H361 YWS 79 YWS H371 H29 H 0 0 N N N 22.031 -2.604 14.016 3.207 -1.999 0.124 H371 YWS 80 YWS H381 H30 H 0 0 N N N 23.806 -4.464 13.684 3.068 -3.667 1.997 H381 YWS 81 YWS H382 H31 H 0 0 N N N 22.469 -4.339 12.491 4.846 -3.679 2.073 H382 YWS 82 YWS H393 H32 H 0 0 N N N 21.857 -2.743 16.434 5.348 -0.912 -0.351 H393 YWS 83 YWS H391 H33 H 0 0 N N N 22.438 -4.443 16.384 6.163 -1.912 0.876 H391 YWS 84 YWS H392 H34 H 0 0 N N N 23.521 -3.108 15.861 5.519 -2.666 -0.602 H392 YWS 85 YWS H401 H35 H 0 0 N N N 13.771 -6.828 12.627 9.463 0.235 -2.755 H401 YWS 86 YWS H411 H36 H 0 0 N N N 17.632 0.476 23.043 -6.867 2.380 -3.039 H411 YWS 87 YWS H412 H37 H 0 0 N N N 19.337 0.995 22.824 -5.687 1.168 -2.485 H412 YWS 88 YWS H451 H38 H 0 0 N N N 17.186 4.809 25.247 -10.015 0.928 -0.003 H451 YWS 89 YWS H452 H39 H 0 0 N N N 16.377 4.667 23.650 -8.899 -0.272 0.692 H452 YWS 90 YWS H461 H40 H 0 0 N N N 16.975 0.020 25.705 -7.615 0.193 1.735 H461 YWS 91 YWS H462 H41 H 0 0 N N N 18.432 -0.609 24.863 -7.339 1.896 2.171 H462 YWS 92 YWS H472 H42 H 0 0 N N N 14.778 5.509 25.395 -10.935 -1.366 -0.205 H472 YWS 93 YWS H473 H43 H 0 0 N N N 14.278 3.897 24.782 -10.604 -0.666 -1.808 H473 YWS 94 YWS H471 H44 H 0 0 N N N 15.087 4.039 26.379 -9.488 -1.866 -1.113 H471 YWS 95 YWS H481 H45 H 0 0 N N N 17.952 -1.917 26.926 -5.264 -0.337 2.319 H481 YWS 96 YWS H482 H46 H 0 0 N N N 19.517 -1.047 27.067 -4.988 1.366 2.755 H482 YWS 97 YWS H483 H47 H 0 0 N N N 18.060 -0.417 27.909 -6.122 0.376 3.706 H483 YWS 98 YWS H503 H48 H 0 0 N N N 14.523 -8.811 13.911 10.390 2.310 -1.763 H503 YWS 99 YWS H501 H49 H 0 0 N N N 14.458 -9.207 12.160 10.570 2.313 -3.534 H501 YWS 100 YWS H502 H50 H 0 0 N N N 16.038 -8.874 12.948 9.288 3.282 -2.768 H502 YWS 101 YWS H161 H51 H 0 0 N N N 21.034 1.624 16.494 -0.132 0.047 -1.142 H161 YWS 102 YWS H141 H52 H 0 0 N N N 20.672 1.261 14.455 2.005 2.990 1.528 H141 YWS 103 YWS H511 H53 H 0 0 N N N 15.354 -6.044 11.075 7.669 2.023 -4.174 H511 YWS 104 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YWS O51 C40 SING N N 1 YWS C40 C50 SING N N 2 YWS C40 C01 SING N N 3 YWS C02 C01 DOUB Y N 4 YWS C02 C03 SING Y N 5 YWS C01 C06 SING Y N 6 YWS C38 C36 SING N N 7 YWS C38 C37 SING N N 8 YWS O14 C13 SING N N 9 YWS C06 C05 DOUB Y N 10 YWS C03 C04 DOUB Y N 11 YWS C11 C37 SING N N 12 YWS C11 N10 SING N N 13 YWS C37 C39 SING N N 14 YWS C12 C13 SING N N 15 YWS C12 N10 SING N N 16 YWS C13 C15 SING N N 17 YWS N10 S07 SING N N 18 YWS C04 C05 SING Y N 19 YWS C04 S07 SING N N 20 YWS S07 O09 DOUB N N 21 YWS S07 O08 DOUB N N 22 YWS C28 C15 SING N N 23 YWS C28 C29 SING N N 24 YWS C15 N16 SING N N 25 YWS N16 C17 SING N N 26 YWS C29 C34 DOUB Y N 27 YWS C29 C30 SING Y N 28 YWS C17 O19 SING N N 29 YWS C17 O18 DOUB N N 30 YWS C34 C33 SING Y N 31 YWS O19 C20 SING N N 32 YWS C21 O22 SING N N 33 YWS C21 C20 SING N N 34 YWS C30 C31 DOUB Y N 35 YWS O22 C24 SING N N 36 YWS C20 C23 SING N N 37 YWS C26 O27 SING N N 38 YWS C26 C25 SING N N 39 YWS O27 C24 SING N N 40 YWS C33 C32 DOUB Y N 41 YWS C24 C23 SING N N 42 YWS C23 C25 SING N N 43 YWS C31 C32 SING Y N 44 YWS C32 O35 SING N N 45 YWS O35 C41 SING N N 46 YWS C41 P42 SING N N 47 YWS P42 O43 SING N N 48 YWS P42 O49 DOUB N N 49 YWS P42 O44 SING N N 50 YWS O43 C45 SING N N 51 YWS C45 C47 SING N N 52 YWS C46 O44 SING N N 53 YWS C46 C48 SING N N 54 YWS C13 H131 SING N N 55 YWS C15 H151 SING N N 56 YWS C20 H201 SING N N 57 YWS C21 H212 SING N N 58 YWS C21 H211 SING N N 59 YWS C24 H241 SING N N 60 YWS C26 H261 SING N N 61 YWS C26 H262 SING N N 62 YWS C28 H282 SING N N 63 YWS C28 H281 SING N N 64 YWS C02 H021 SING N N 65 YWS C03 H031 SING N N 66 YWS C05 H051 SING N N 67 YWS C06 H061 SING N N 68 YWS C11 H111 SING N N 69 YWS C11 H112 SING N N 70 YWS C12 H121 SING N N 71 YWS C12 H122 SING N N 72 YWS C23 H231 SING N N 73 YWS C25 H251 SING N N 74 YWS C25 H252 SING N N 75 YWS C30 H301 SING N N 76 YWS C31 H311 SING N N 77 YWS C33 H331 SING N N 78 YWS C34 H341 SING N N 79 YWS C36 H362 SING N N 80 YWS C36 H363 SING N N 81 YWS C36 H361 SING N N 82 YWS C37 H371 SING N N 83 YWS C38 H381 SING N N 84 YWS C38 H382 SING N N 85 YWS C39 H393 SING N N 86 YWS C39 H391 SING N N 87 YWS C39 H392 SING N N 88 YWS C40 H401 SING N N 89 YWS C41 H411 SING N N 90 YWS C41 H412 SING N N 91 YWS C45 H451 SING N N 92 YWS C45 H452 SING N N 93 YWS C46 H461 SING N N 94 YWS C46 H462 SING N N 95 YWS C47 H472 SING N N 96 YWS C47 H473 SING N N 97 YWS C47 H471 SING N N 98 YWS C48 H481 SING N N 99 YWS C48 H482 SING N N 100 YWS C48 H483 SING N N 101 YWS C50 H503 SING N N 102 YWS C50 H501 SING N N 103 YWS C50 H502 SING N N 104 YWS N16 H161 SING N N 105 YWS O14 H141 SING N N 106 YWS O51 H511 SING N N 107 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YWS SMILES ACDLabs 12.01 "CC(O)c1ccc(cc1)S(=O)(=O)N(CC(C)CC)CC(O)C(Cc1ccc(OCP(=O)(OCC)OCC)cc1)NC(=O)OC1COC2OCCC12" YWS InChI InChI 1.03 "InChI=1S/C35H53N2O12PS/c1-6-24(4)20-37(51(42,43)29-15-11-27(12-16-29)25(5)38)21-32(39)31(36-35(40)49-33-22-45-34-30(33)17-18-44-34)19-26-9-13-28(14-10-26)46-23-50(41,47-7-2)48-8-3/h9-16,24-25,30-34,38-39H,6-8,17-23H2,1-5H3,(H,36,40)/t24-,25-,30-,31-,32+,33-,34+/m0/s1" YWS InChIKey InChI 1.03 IVJFUQHLIVELPH-ZXJRQIRTSA-N YWS SMILES_CANONICAL CACTVS 3.385 "CCO[P](=O)(COc1ccc(C[C@H](NC(=O)O[C@H]2CO[C@H]3OCC[C@@H]23)[C@H](O)CN(C[C@@H](C)CC)[S](=O)(=O)c4ccc(cc4)[C@H](C)O)cc1)OCC" YWS SMILES CACTVS 3.385 "CCO[P](=O)(COc1ccc(C[CH](NC(=O)O[CH]2CO[CH]3OCC[CH]23)[CH](O)CN(C[CH](C)CC)[S](=O)(=O)c4ccc(cc4)[CH](C)O)cc1)OCC" YWS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@H](C)CN(C[C@H]([C@H](Cc1ccc(cc1)OCP(=O)(OCC)OCC)NC(=O)O[C@H]2CO[C@@H]3[C@H]2CCO3)O)S(=O)(=O)c4ccc(cc4)[C@H](C)O" YWS SMILES "OpenEye OEToolkits" 2.0.7 "CCC(C)CN(CC(C(Cc1ccc(cc1)OCP(=O)(OCC)OCC)NC(=O)OC2COC3C2CCO3)O)S(=O)(=O)c4ccc(cc4)C(C)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YWS "SYSTEMATIC NAME" ACDLabs 12.01 "diethyl ({4-[(2S,3R)-2-[({[(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl]oxy}carbonyl)amino]-3-hydroxy-4-({4-[(1S)-1-hydroxyethyl]benzene-1-sulfonyl}[(2S)-2-methylbutyl]amino)butyl]phenoxy}methyl)phosphonate" YWS "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(3~{a}~{S},4~{R},6~{a}~{R})-2,3,3~{a},4,5,6~{a}-hexahydrofuro[2,3-b]furan-4-yl] ~{N}-[(2~{S},3~{R})-1-[4-(diethoxyphosphorylmethoxy)phenyl]-4-[[(2~{S})-2-methylbutyl]-[4-[(1~{S})-1-oxidanylethyl]phenyl]sulfonyl-amino]-3-oxidanyl-butan-2-yl]carbamate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YWS "Create component" 2021-04-02 RCSB YWS "Initial release" 2022-04-20 RCSB ##