data_YXJ # _chem_comp.id YXJ _chem_comp.name "5-(piperidin-1-yl)-3-[4-(piperidin-4-yl)anilino]pyrazine-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H28 N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-03-03 _chem_comp.pdbx_modified_date 2024-01-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 380.487 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YXJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8GC7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YXJ C4 C1 C 0 1 Y N N N N N 8.716 -5.727 -14.718 2.865 -0.595 -0.219 C4 YXJ 1 YXJ C14 C2 C 0 1 N N N N N N 18.811 -4.856 -15.664 -6.719 -0.716 0.968 C14 YXJ 2 YXJ C5 C3 C 0 1 Y N N N N N 10.282 -5.881 -13.019 1.754 1.393 0.089 C5 YXJ 3 YXJ C6 C4 C 0 1 Y N N N N N 12.734 -5.341 -13.303 -0.648 1.427 0.259 C6 YXJ 4 YXJ C11 C5 C 0 1 Y N N N N N 13.961 -5.303 -12.642 -1.809 2.143 -0.006 C11 YXJ 5 YXJ C7 C6 C 0 1 Y N N N N N 12.707 -5.057 -14.665 -0.712 0.053 0.451 C7 YXJ 6 YXJ C8 C7 C 0 1 Y N N N N N 13.873 -4.719 -15.337 -1.928 -0.597 0.378 C8 YXJ 7 YXJ C9 C8 C 0 1 Y N N N N N 15.098 -4.672 -14.690 -3.082 0.118 0.113 C9 YXJ 8 YXJ C10 C9 C 0 1 Y N N N N N 15.121 -4.966 -13.332 -3.022 1.487 -0.073 C10 YXJ 9 YXJ C12 C10 C 0 1 N N N N N N 16.361 -4.304 -15.449 -4.407 -0.595 0.033 C12 YXJ 10 YXJ C13 C11 C 0 1 N N N N N N 17.606 -4.844 -14.746 -5.356 -0.031 1.094 C13 YXJ 11 YXJ N1 N1 N 0 1 N N N N N N 8.478 -7.285 -10.079 4.119 4.232 -0.279 N1 YXJ 12 YXJ N2 N2 N 0 1 Y N N N N N 8.036 -6.628 -12.626 4.091 1.412 -0.298 N2 YXJ 13 YXJ C3 C12 C 0 1 Y N N N N N 7.745 -6.287 -13.882 4.070 0.101 -0.376 C3 YXJ 14 YXJ N3 N3 N 0 1 Y N N N N N 9.969 -5.552 -14.279 1.739 0.068 0.010 N3 YXJ 15 YXJ C1 C13 C 0 1 N N N N N N 9.530 -6.845 -10.743 2.990 3.558 0.017 C1 YXJ 16 YXJ C15 C14 C 0 1 N N N N N N 17.207 -5.983 -17.106 -6.392 -1.057 -1.409 C15 YXJ 17 YXJ C16 C15 C 0 1 N N N N N N 16.387 -4.726 -16.912 -5.019 -0.382 -1.354 C16 YXJ 18 YXJ C17 C16 C 0 1 N N N N N N 9.369 -4.641 -16.860 4.195 -2.503 -0.563 C17 YXJ 19 YXJ C18 C17 C 0 1 N N N N N N 9.867 -5.551 -17.964 4.117 -4.013 -0.799 C18 YXJ 20 YXJ C19 C18 C 0 1 N N N N N N 8.707 -6.114 -18.771 3.510 -4.687 0.435 C19 YXJ 21 YXJ C2 C19 C 0 1 Y N N N N N 9.279 -6.440 -12.168 2.965 2.087 -0.069 C2 YXJ 22 YXJ C20 C20 C 0 1 N N N N N N 7.695 -6.784 -17.856 2.129 -4.085 0.707 C20 YXJ 23 YXJ C21 C21 C 0 1 N N N N N N 7.262 -5.849 -16.744 2.265 -2.573 0.900 C21 YXJ 24 YXJ N4 N4 N 0 1 N N N N N N 11.563 -5.695 -12.592 0.582 2.088 0.327 N4 YXJ 25 YXJ N5 N5 N 0 1 N N N N N N 18.627 -5.764 -16.803 -7.263 -0.483 -0.375 N5 YXJ 26 YXJ N6 N6 N 0 1 N N N N N N 8.443 -5.390 -16.011 2.849 -1.975 -0.307 N6 YXJ 27 YXJ O1 O1 O 0 1 N N N N N N 10.658 -6.755 -10.245 1.991 4.164 0.356 O1 YXJ 28 YXJ H12 H1 H 0 1 N N N N N N 19.691 -5.181 -15.090 -6.603 -1.788 1.132 H12 YXJ 29 YXJ H13 H2 H 0 1 N N N N N N 18.977 -3.838 -16.045 -7.401 -0.307 1.713 H13 YXJ 30 YXJ H8 H3 H 0 1 N N N N N N 14.011 -5.536 -11.589 -1.762 3.211 -0.160 H8 YXJ 31 YXJ H5 H4 H 0 1 N N N N N N 11.772 -5.100 -15.203 0.189 -0.506 0.657 H5 YXJ 32 YXJ H6 H5 H 0 1 N N N N N N 13.825 -4.487 -16.391 -1.977 -1.666 0.522 H6 YXJ 33 YXJ H7 H6 H 0 1 N N N N N N 16.060 -4.932 -12.800 -3.925 2.043 -0.279 H7 YXJ 34 YXJ H9 H7 H 0 1 N N N N N N 16.437 -3.207 -15.432 -4.258 -1.661 0.207 H9 YXJ 35 YXJ H11 H8 H 0 1 N N N N N N 17.406 -5.871 -14.408 -5.473 1.042 0.944 H11 YXJ 36 YXJ H10 H9 H 0 1 N N N N N N 17.828 -4.208 -13.876 -4.945 -0.218 2.086 H10 YXJ 37 YXJ H2 H10 H 0 1 N N N N N N 8.571 -7.566 -9.124 4.135 5.200 -0.222 H2 YXJ 38 YXJ H1 H11 H 0 1 N N N N N N 7.588 -7.337 -10.531 4.915 3.748 -0.549 H1 YXJ 39 YXJ H3 H12 H 0 1 N N N N N N 6.745 -6.446 -14.259 4.984 -0.442 -0.562 H3 YXJ 40 YXJ H16 H13 H 0 1 N N N N N N 16.818 -6.767 -16.440 -6.837 -0.895 -2.390 H16 YXJ 41 YXJ H15 H14 H 0 1 N N N N N N 17.113 -6.311 -18.152 -6.278 -2.127 -1.234 H15 YXJ 42 YXJ H18 H15 H 0 1 N N N N N N 16.827 -3.915 -17.511 -5.131 0.686 -1.542 H18 YXJ 43 YXJ H17 H16 H 0 1 N N N N N N 15.357 -4.914 -17.249 -4.368 -0.820 -2.110 H17 YXJ 44 YXJ H19 H17 H 0 1 N N N N N N 10.220 -4.290 -16.258 4.833 -2.302 0.298 H19 YXJ 45 YXJ H20 H18 H 0 1 N N N N N N 8.850 -3.777 -17.300 4.613 -2.018 -1.446 H20 YXJ 46 YXJ H22 H19 H 0 1 N N N N N N 10.432 -6.383 -17.517 3.490 -4.213 -1.668 H22 YXJ 47 YXJ H21 H20 H 0 1 N N N N N N 10.526 -4.978 -18.633 5.118 -4.406 -0.974 H21 YXJ 48 YXJ H23 H21 H 0 1 N N N N N N 8.215 -5.295 -19.316 3.413 -5.757 0.254 H23 YXJ 49 YXJ H24 H22 H 0 1 N N N N N N 9.091 -6.854 -19.489 4.157 -4.519 1.296 H24 YXJ 50 YXJ H25 H23 H 0 1 N N N N N N 6.813 -7.073 -18.446 1.471 -4.287 -0.138 H25 YXJ 51 YXJ H26 H24 H 0 1 N N N N N N 8.150 -7.682 -17.413 1.710 -4.531 1.610 H26 YXJ 52 YXJ H28 H25 H 0 1 N N N N N N 6.738 -4.983 -17.175 1.281 -2.140 1.080 H28 YXJ 53 YXJ H27 H26 H 0 1 N N N N N N 6.588 -6.382 -16.058 2.912 -2.373 1.754 H27 YXJ 54 YXJ H4 H27 H 0 1 N N N N N N 11.698 -5.832 -11.611 0.613 3.033 0.541 H4 YXJ 55 YXJ H14 H28 H 0 1 N N N N N N 19.051 -6.644 -16.587 -7.416 0.502 -0.537 H14 YXJ 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YXJ C19 C18 SING N N 1 YXJ C19 C20 SING N N 2 YXJ C18 C17 SING N N 3 YXJ C20 C21 SING N N 4 YXJ C15 C16 SING N N 5 YXJ C15 N5 SING N N 6 YXJ C16 C12 SING N N 7 YXJ C17 N6 SING N N 8 YXJ N5 C14 SING N N 9 YXJ C21 N6 SING N N 10 YXJ N6 C4 SING N N 11 YXJ C14 C13 SING N N 12 YXJ C12 C13 SING N N 13 YXJ C12 C9 SING N N 14 YXJ C8 C9 DOUB Y N 15 YXJ C8 C7 SING Y N 16 YXJ C4 N3 DOUB Y N 17 YXJ C4 C3 SING Y N 18 YXJ C9 C10 SING Y N 19 YXJ C7 C6 DOUB Y N 20 YXJ N3 C5 SING Y N 21 YXJ C3 N2 DOUB Y N 22 YXJ C10 C11 DOUB Y N 23 YXJ C6 C11 SING Y N 24 YXJ C6 N4 SING N N 25 YXJ C5 N4 SING N N 26 YXJ C5 C2 DOUB Y N 27 YXJ N2 C2 SING Y N 28 YXJ C2 C1 SING N N 29 YXJ C1 O1 DOUB N N 30 YXJ C1 N1 SING N N 31 YXJ C14 H12 SING N N 32 YXJ C14 H13 SING N N 33 YXJ C11 H8 SING N N 34 YXJ C7 H5 SING N N 35 YXJ C8 H6 SING N N 36 YXJ C10 H7 SING N N 37 YXJ C12 H9 SING N N 38 YXJ C13 H11 SING N N 39 YXJ C13 H10 SING N N 40 YXJ N1 H2 SING N N 41 YXJ N1 H1 SING N N 42 YXJ C3 H3 SING N N 43 YXJ C15 H16 SING N N 44 YXJ C15 H15 SING N N 45 YXJ C16 H18 SING N N 46 YXJ C16 H17 SING N N 47 YXJ C17 H19 SING N N 48 YXJ C17 H20 SING N N 49 YXJ C18 H22 SING N N 50 YXJ C18 H21 SING N N 51 YXJ C19 H23 SING N N 52 YXJ C19 H24 SING N N 53 YXJ C20 H25 SING N N 54 YXJ C20 H26 SING N N 55 YXJ C21 H28 SING N N 56 YXJ C21 H27 SING N N 57 YXJ N4 H4 SING N N 58 YXJ N5 H14 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YXJ SMILES ACDLabs 12.01 "NC(=O)c1ncc(nc1Nc1ccc(cc1)C1CCNCC1)N1CCCCC1" YXJ InChI InChI 1.06 "InChI=1S/C21H28N6O/c22-20(28)19-21(26-18(14-24-19)27-12-2-1-3-13-27)25-17-6-4-15(5-7-17)16-8-10-23-11-9-16/h4-7,14,16,23H,1-3,8-13H2,(H2,22,28)(H,25,26)" YXJ InChIKey InChI 1.06 VGSQWWPMYSJONU-UHFFFAOYSA-N YXJ SMILES_CANONICAL CACTVS 3.385 "NC(=O)c1ncc(nc1Nc2ccc(cc2)C3CCNCC3)N4CCCCC4" YXJ SMILES CACTVS 3.385 "NC(=O)c1ncc(nc1Nc2ccc(cc2)C3CCNCC3)N4CCCCC4" YXJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C2CCNCC2)Nc3c(ncc(n3)N4CCCCC4)C(=O)N" YXJ SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C2CCNCC2)Nc3c(ncc(n3)N4CCCCC4)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YXJ "SYSTEMATIC NAME" ACDLabs 12.01 "5-(piperidin-1-yl)-3-[4-(piperidin-4-yl)anilino]pyrazine-2-carboxamide" YXJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-piperidin-1-yl-3-[(4-piperidin-4-ylphenyl)amino]pyrazine-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YXJ "Create component" 2023-03-03 RCSB YXJ "Initial release" 2024-01-31 RCSB #