data_YXP # _chem_comp.id YXP _chem_comp.name "{(5Z)-5-[(4-methoxyphenyl)methylidene]-2,4-dioxo-1,3-thiazolidin-3-yl}acetic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H11 N O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-04-06 _chem_comp.pdbx_modified_date 2021-07-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 293.295 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YXP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7MDS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YXP C4 C1 C 0 1 Y N N -37.039 -8.050 18.301 -2.261 -0.271 -0.336 C4 YXP 1 YXP C5 C2 C 0 1 Y N N -36.616 -8.839 17.223 -2.044 1.058 0.048 C5 YXP 2 YXP C6 C3 C 0 1 N N N -35.228 -9.262 17.103 -0.675 1.572 0.183 C6 YXP 3 YXP C11 C4 C 0 1 N N N -33.115 -10.007 16.066 1.794 1.013 0.375 C11 YXP 4 YXP C7 C5 C 0 1 N N N -34.601 -9.993 16.162 0.358 0.712 0.369 C7 YXP 5 YXP C8 C6 C 0 1 N N N -33.724 -11.493 14.326 2.041 -1.240 0.757 C8 YXP 6 YXP C9 C7 C 0 1 N N N -31.344 -11.077 14.623 4.037 0.138 0.600 C9 YXP 7 YXP C10 C8 C 0 1 N N N -30.737 -12.260 15.367 4.584 -0.033 -0.794 C10 YXP 8 YXP C12 C9 C 0 1 Y N N -37.585 -9.184 16.271 -3.137 1.895 0.304 C12 YXP 9 YXP C13 C10 C 0 1 Y N N -38.900 -8.771 16.387 -4.418 1.408 0.176 C13 YXP 10 YXP N1 N1 N 0 1 N N N -32.728 -10.839 15.017 2.582 -0.030 0.578 N1 YXP 11 YXP C3 C11 C 0 1 Y N N -38.352 -7.630 18.426 -3.546 -0.747 -0.461 C3 YXP 12 YXP C1 C12 C 0 1 N N N -41.138 -7.199 18.799 -6.038 -1.753 -0.725 C1 YXP 13 YXP O1 O1 O 0 1 N N N -40.609 -7.606 17.539 -5.894 -0.387 -0.330 O1 YXP 14 YXP C2 C13 C 0 1 Y N N -39.293 -7.995 17.470 -4.628 0.088 -0.206 C2 YXP 15 YXP S1 S1 S 0 1 N N N -35.268 -11.051 14.943 0.282 -1.037 0.663 S1 YXP 16 YXP O2 O2 O 0 1 N N N -33.538 -12.270 13.412 2.640 -2.280 0.952 O2 YXP 17 YXP O3 O3 O 0 1 N N N -31.548 -12.998 15.989 5.903 0.079 -1.016 O3 YXP 18 YXP O4 O4 O 0 1 N N N -29.497 -12.382 15.292 3.835 -0.271 -1.712 O4 YXP 19 YXP O5 O5 O 0 1 N N N -32.334 -9.402 16.786 2.227 2.137 0.202 O5 YXP 20 YXP H1 H1 H 0 1 N N N -36.321 -7.762 19.055 -1.421 -0.919 -0.538 H1 YXP 21 YXP H2 H2 H 0 1 N N N -34.590 -8.932 17.909 -0.490 2.635 0.133 H2 YXP 22 YXP H4 H4 H 0 1 N N N -31.312 -11.282 13.543 4.479 -0.610 1.258 H4 YXP 23 YXP H5 H5 H 0 1 N N N -30.752 -10.177 14.843 4.282 1.135 0.966 H5 YXP 24 YXP H6 H6 H 0 1 N N N -37.297 -9.789 15.424 -2.975 2.921 0.600 H6 YXP 25 YXP H7 H7 H 0 1 N N N -39.622 -9.052 15.635 -5.262 2.053 0.372 H7 YXP 26 YXP H8 H8 H 0 1 N N N -38.646 -7.019 19.266 -3.715 -1.771 -0.761 H8 YXP 27 YXP H9 H9 H 0 1 N N N -42.196 -6.922 18.681 -5.573 -1.900 -1.699 H9 YXP 28 YXP H10 H10 H 0 1 N N N -41.055 -8.028 19.517 -5.554 -2.397 0.010 H10 YXP 29 YXP H11 H11 H 0 1 N N N -40.571 -6.333 19.172 -7.097 -2.004 -0.786 H11 YXP 30 YXP H12 H12 H 0 1 N N N -31.073 -13.699 16.419 6.206 -0.039 -1.926 H12 YXP 31 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YXP O2 C8 DOUB N N 1 YXP C8 S1 SING N N 2 YXP C8 N1 SING N N 3 YXP C9 N1 SING N N 4 YXP C9 C10 SING N N 5 YXP S1 C7 SING N N 6 YXP N1 C11 SING N N 7 YXP O4 C10 DOUB N N 8 YXP C10 O3 SING N N 9 YXP C11 C7 SING N N 10 YXP C11 O5 DOUB N N 11 YXP C7 C6 DOUB N Z 12 YXP C12 C13 DOUB Y N 13 YXP C12 C5 SING Y N 14 YXP C13 C2 SING Y N 15 YXP C6 C5 SING N N 16 YXP C5 C4 DOUB Y N 17 YXP C2 O1 SING N N 18 YXP C2 C3 DOUB Y N 19 YXP O1 C1 SING N N 20 YXP C4 C3 SING Y N 21 YXP C4 H1 SING N N 22 YXP C6 H2 SING N N 23 YXP C9 H4 SING N N 24 YXP C9 H5 SING N N 25 YXP C12 H6 SING N N 26 YXP C13 H7 SING N N 27 YXP C3 H8 SING N N 28 YXP C1 H9 SING N N 29 YXP C1 H10 SING N N 30 YXP C1 H11 SING N N 31 YXP O3 H12 SING N N 32 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YXP SMILES ACDLabs 12.01 "OC(=O)CN1C(=O)C(=C/c2ccc(OC)cc2)/SC1=O" YXP InChI InChI 1.03 "InChI=1S/C13H11NO5S/c1-19-9-4-2-8(3-5-9)6-10-12(17)14(7-11(15)16)13(18)20-10/h2-6H,7H2,1H3,(H,15,16)/b10-6-" YXP InChIKey InChI 1.03 VMHLNIJHJPIPKG-POHAHGRESA-N YXP SMILES_CANONICAL CACTVS 3.385 "COc1ccc(cc1)/C=C/2SC(=O)N(CC(O)=O)C/2=O" YXP SMILES CACTVS 3.385 "COc1ccc(cc1)C=C2SC(=O)N(CC(O)=O)C2=O" YXP SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1)/C=C\2/C(=O)N(C(=O)S2)CC(=O)O" YXP SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1)C=C2C(=O)N(C(=O)S2)CC(=O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YXP "SYSTEMATIC NAME" ACDLabs 12.01 "{(5Z)-5-[(4-methoxyphenyl)methylidene]-2,4-dioxo-1,3-thiazolidin-3-yl}acetic acid" YXP "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[(5~{Z})-5-[(4-methoxyphenyl)methylidene]-2,4-bis(oxidanylidene)-1,3-thiazolidin-3-yl]ethanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YXP "Create component" 2021-04-06 RCSB YXP "Initial release" 2021-08-04 RCSB ##