data_YZT # _chem_comp.id YZT _chem_comp.name 6-deoxy-6-sulfo-beta-D-glucopyranose _chem_comp.type SACCHARIDE _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H12 O8 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-12-18 _chem_comp.pdbx_modified_date 2022-04-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 244.220 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YZT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1Q90 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YZT C1 C1 C 0 1 N N R 3.304 -4.125 -4.097 1.418 -1.433 0.238 C1 YZT 1 YZT C2 C2 C 0 1 N N R 4.334 -3.712 -5.148 2.615 -0.582 -0.194 C2 YZT 2 YZT C3 C3 C 0 1 N N S 5.760 -3.860 -4.618 2.389 0.866 0.250 C3 YZT 3 YZT C4 C4 C 0 1 N N S 5.907 -3.219 -3.238 1.071 1.372 -0.344 C4 YZT 4 YZT C5 C5 C 0 1 N N S 4.793 -3.688 -2.299 -0.066 0.445 0.095 C5 YZT 5 YZT C6 C6 C 0 1 N N N 4.849 -2.973 -0.953 -1.377 0.909 -0.544 C6 YZT 6 YZT O1 O1 O 0 1 N Y N 2.007 -3.825 -4.611 1.595 -2.774 -0.222 O1 YZT 7 YZT O1S6 O1S6 O 0 0 N N N 4.031 -2.728 1.454 -3.980 0.456 -0.611 O1S6 YZT 8 YZT O2 O2 O 0 1 N N N 4.165 -4.547 -6.293 3.805 -1.089 0.413 O2 YZT 9 YZT O2S6 O2S6 O 0 0 N N N 3.681 -4.942 0.329 -2.645 -1.433 -0.380 O2S6 YZT 10 YZT O3 O3 O 0 1 N N N 6.668 -3.208 -5.507 3.467 1.682 -0.213 O3 YZT 11 YZT O3S6 O3S6 O 0 0 N N N 2.299 -2.930 -0.347 -2.973 0.181 1.466 O3S6 YZT 12 YZT O4 O4 O 0 1 N N N 7.171 -3.576 -2.684 0.815 2.697 0.123 O4 YZT 13 YZT O5 O5 O 0 1 N N N 3.517 -3.412 -2.881 0.221 -0.891 -0.323 O5 YZT 14 YZT S6 S6 S 0 1 N N N 3.552 -3.511 0.105 -2.747 -0.096 0.091 S6 YZT 15 YZT H1 H1 H 0 1 N N N 3.397 -5.207 -3.920 1.344 -1.429 1.326 H1 YZT 16 YZT H1O H1O H 0 1 N Y N 1.348 -4.074 -3.974 0.873 -3.371 0.017 H1O YZT 17 YZT H1S6 H1S6 H 0 0 N N N 3.398 -2.054 1.671 -4.803 0.011 -0.368 H1S6 YZT 18 YZT H2 H2 H 0 1 N N N 4.163 -2.659 -5.417 2.715 -0.620 -1.279 H2 YZT 19 YZT H2O H2O H 0 1 N N N 4.798 -4.305 -6.959 4.007 -2.005 0.178 H2O YZT 20 YZT H3 H3 H 0 1 N N N 6.003 -4.930 -4.542 2.341 0.910 1.338 H3 YZT 21 YZT H3O H3O H 0 1 N N N 7.555 -3.300 -5.178 4.335 1.413 0.119 H3O YZT 22 YZT H4 H4 H 0 1 N N N 5.838 -2.127 -3.348 1.140 1.375 -1.432 H4 YZT 23 YZT H4O H4O H 0 1 N N N 7.265 -3.179 -1.826 1.499 3.338 -0.115 H4O YZT 24 YZT H5 H5 H 0 1 N N N 4.905 -4.769 -2.131 -0.160 0.474 1.180 H5 YZT 25 YZT H61 H61 H 0 1 N N N 5.816 -3.186 -0.473 -1.550 1.957 -0.298 H61 YZT 26 YZT H62 H62 H 0 1 N N N 4.752 -1.890 -1.118 -1.314 0.796 -1.626 H62 YZT 27 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YZT C1 O1 SING N N 1 YZT C1 C2 SING N N 2 YZT C1 O5 SING N N 3 YZT C1 H1 SING N N 4 YZT C2 O2 SING N N 5 YZT C2 C3 SING N N 6 YZT C2 H2 SING N N 7 YZT C3 O3 SING N N 8 YZT C3 C4 SING N N 9 YZT C3 H3 SING N N 10 YZT C4 O4 SING N N 11 YZT C4 C5 SING N N 12 YZT C4 H4 SING N N 13 YZT C5 C6 SING N N 14 YZT C5 H5 SING N N 15 YZT C5 O5 SING N N 16 YZT C6 S6 SING N N 17 YZT C6 H61 SING N N 18 YZT C6 H62 SING N N 19 YZT O1 H1O SING N N 20 YZT O1S6 H1S6 SING N N 21 YZT O1S6 S6 SING N N 22 YZT O2 H2O SING N N 23 YZT O2S6 S6 DOUB N N 24 YZT O3 H3O SING N N 25 YZT O3S6 S6 DOUB N N 26 YZT O4 H4O SING N N 27 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YZT SMILES ACDLabs 12.01 "O=S(=O)(O)CC1OC(O)C(O)C(O)C1O" YZT InChI InChI 1.03 "InChI=1S/C6H12O8S/c7-3-2(1-15(11,12)13)14-6(10)5(9)4(3)8/h2-10H,1H2,(H,11,12,13)/t2-,3-,4+,5-,6-/m1/s1" YZT InChIKey InChI 1.03 QFBWOLBPVQLZEH-VFUOTHLCSA-N YZT SMILES_CANONICAL CACTVS 3.370 "O[C@@H]1O[C@H](C[S](O)(=O)=O)[C@@H](O)[C@H](O)[C@H]1O" YZT SMILES CACTVS 3.370 "O[CH]1O[CH](C[S](O)(=O)=O)[CH](O)[CH](O)[CH]1O" YZT SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)S(=O)(=O)O" YZT SMILES "OpenEye OEToolkits" 1.7.6 "C(C1C(C(C(C(O1)O)O)O)O)S(=O)(=O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YZT "SYSTEMATIC NAME" ACDLabs 12.01 6-deoxy-6-sulfo-beta-D-glucopyranose YZT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2S,3S,4S,5R,6R)-3,4,5,6-tetrakis(oxidanyl)oxan-2-yl]methanesulfonic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YZT "Create component" 2012-12-18 RCSB YZT "Other modification" 2013-01-11 RCSB YZT "Modify atom id" 2013-03-03 RCSB YZT "Initial release" 2022-04-13 RCSB ##