data_Z16 # _chem_comp.id Z16 _chem_comp.name "(1S)-1,5-anhydro-1-(3-chloro-2,5-dihydroxyphenyl)-D-glucitol" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C12 H15 Cl O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-07-01 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 306.696 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Z16 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3NP7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Z16 C1A C1 C 0 1 Y N N 33.977 24.001 30.260 1.933 -0.460 -0.516 C1A Z16 1 Z16 O1 O1 O 0 1 N N N 32.628 24.035 30.443 1.722 -1.568 -1.275 O1 Z16 2 Z16 C2A C2 C 0 1 Y N N 34.530 23.495 29.079 0.855 0.273 -0.044 C2A Z16 3 Z16 C3A C3 C 0 1 Y N N 35.918 23.469 28.932 1.069 1.399 0.728 C3A Z16 4 Z16 C4A C4 C 0 1 Y N N 36.739 23.956 29.949 2.363 1.797 1.030 C4A Z16 5 Z16 O4A O4 O 0 1 N N N 38.087 23.936 29.806 2.573 2.906 1.789 O4A Z16 6 Z16 C5A C5 C 0 1 Y N N 36.185 24.457 31.122 3.442 1.064 0.559 C5A Z16 7 Z16 C6A C6 C 0 1 Y N N 34.804 24.479 31.275 3.228 -0.065 -0.209 C6A Z16 8 Z16 CL6 CL6 CL 0 1 N N N 34.113 25.094 32.734 4.578 -0.986 -0.794 CL6 Z16 9 Z16 C1 "C1'" C 0 1 N N S 33.606 22.954 27.975 -0.551 -0.159 -0.372 C1 Z16 10 Z16 C2 "C2'" C 0 1 N N R 34.113 23.079 26.526 -1.012 -1.210 0.641 C2 Z16 11 Z16 O2 "O2'" O 0 1 N N N 34.407 24.446 26.229 -0.176 -2.365 0.544 O2 Z16 12 Z16 C3 "C3'" C 0 1 N N R 33.057 22.522 25.553 -2.462 -1.600 0.337 C3 Z16 13 Z16 O3 "O3'" O 0 1 N N N 33.564 22.516 24.215 -2.924 -2.526 1.321 O3 Z16 14 Z16 C4 "C4'" C 0 1 N N S 32.619 21.100 25.951 -3.334 -0.341 0.368 C4 Z16 15 Z16 O4 "O4'" O 0 1 N N N 31.454 20.746 25.210 -4.676 -0.681 0.014 O4 Z16 16 Z16 C5 "C5'" C 0 1 N N R 32.312 20.998 27.465 -2.784 0.677 -0.634 C5 Z16 17 Z16 O5 "O5'" O 0 1 N N N 33.410 21.529 28.248 -1.423 0.972 -0.313 O5 Z16 18 Z16 C6 "C6'" C 0 1 N N N 32.025 19.561 27.931 -3.614 1.960 -0.566 C6 Z16 19 Z16 O6 "O6'" O 0 1 N N N 33.095 18.691 27.546 -3.175 2.866 -1.581 O6 Z16 20 Z16 HO1 HO1 H 0 1 N N N 32.433 24.407 31.295 1.639 -2.385 -0.764 HO1 Z16 21 Z16 H3A H3 H 0 1 N N N 36.357 23.071 28.029 0.229 1.970 1.094 H3A Z16 22 Z16 HO4A HO4 H 0 0 N N N 38.494 24.301 30.583 2.616 2.730 2.739 HO4A Z16 23 Z16 H5A H5 H 0 1 N N N 36.825 24.827 31.910 4.450 1.374 0.795 H5A Z16 24 Z16 H1 "H1'" H 0 1 N N N 32.697 23.571 28.017 -0.576 -0.585 -1.375 H1 Z16 25 Z16 H2 "H2'" H 0 1 N N N 35.037 22.493 26.410 -0.949 -0.798 1.648 H2 Z16 26 Z16 HO2 "HO2'" H 0 1 N Y N 34.719 24.516 25.334 -0.411 -3.074 1.159 HO2 Z16 27 Z16 H3 "H3'" H 0 1 N N N 32.177 23.181 25.605 -2.517 -2.057 -0.651 H3 Z16 28 Z16 HO3 "HO3'" H 0 1 N Y N 32.903 22.170 23.627 -3.838 -2.816 1.190 HO3 Z16 29 Z16 H4 "H4'" H 0 1 N N N 33.446 20.411 25.725 -3.318 0.089 1.369 H4 Z16 30 Z16 HO4 "HO4'" H 0 1 N Y N 31.179 19.869 25.451 -5.087 -1.327 0.605 HO4 Z16 31 Z16 H5 "H5'" H 0 1 N N N 31.401 21.593 27.625 -2.838 0.262 -1.641 H5 Z16 32 Z16 H61 "H6'" H 0 1 N N N 31.925 19.549 29.026 -4.666 1.721 -0.723 H61 Z16 33 Z16 H62 "H6'A" H 0 1 N N N 31.090 19.211 27.469 -3.488 2.423 0.413 H62 Z16 34 Z16 HO6 "HO6'" H 0 1 N Y N 32.906 17.807 27.839 -3.658 3.703 -1.597 HO6 Z16 35 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Z16 C2A C1A DOUB Y N 1 Z16 C1A O1 SING N N 2 Z16 C1A C6A SING Y N 3 Z16 O1 HO1 SING N N 4 Z16 C1 C2A SING N N 5 Z16 C3A C2A SING Y N 6 Z16 C3A C4A DOUB Y N 7 Z16 C3A H3A SING N N 8 Z16 O4A C4A SING N N 9 Z16 C4A C5A SING Y N 10 Z16 O4A HO4A SING N N 11 Z16 C5A C6A DOUB Y N 12 Z16 C5A H5A SING N N 13 Z16 C6A CL6 SING N N 14 Z16 C2 C1 SING N N 15 Z16 C1 O5 SING N N 16 Z16 C1 H1 SING N N 17 Z16 C3 C2 SING N N 18 Z16 O2 C2 SING N N 19 Z16 C2 H2 SING N N 20 Z16 O2 HO2 SING N N 21 Z16 O3 C3 SING N N 22 Z16 C3 C4 SING N N 23 Z16 C3 H3 SING N N 24 Z16 O3 HO3 SING N N 25 Z16 O4 C4 SING N N 26 Z16 C4 C5 SING N N 27 Z16 C4 H4 SING N N 28 Z16 O4 HO4 SING N N 29 Z16 C5 C6 SING N N 30 Z16 C5 O5 SING N N 31 Z16 C5 H5 SING N N 32 Z16 O6 C6 SING N N 33 Z16 C6 H61 SING N N 34 Z16 C6 H62 SING N N 35 Z16 O6 HO6 SING N N 36 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Z16 SMILES ACDLabs 12.01 "Clc1cc(O)cc(c1O)C2OC(CO)C(O)C(O)C2O" Z16 SMILES_CANONICAL CACTVS 3.370 "OC[C@H]1O[C@H]([C@H](O)[C@@H](O)[C@@H]1O)c2cc(O)cc(Cl)c2O" Z16 SMILES CACTVS 3.370 "OC[CH]1O[CH]([CH](O)[CH](O)[CH]1O)c2cc(O)cc(Cl)c2O" Z16 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1c(cc(c(c1[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O)Cl)O" Z16 SMILES "OpenEye OEToolkits" 1.7.0 "c1c(cc(c(c1C2C(C(C(C(O2)CO)O)O)O)O)Cl)O" Z16 InChI InChI 1.03 "InChI=1S/C12H15ClO7/c13-6-2-4(15)1-5(8(6)16)12-11(19)10(18)9(17)7(3-14)20-12/h1-2,7,9-12,14-19H,3H2/t7-,9-,10+,11-,12+/m1/s1" Z16 InChIKey InChI 1.03 SCGLZDHCPHCUAO-URYVQPGZSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Z16 "SYSTEMATIC NAME" ACDLabs 12.01 "(1S)-1,5-anhydro-1-(3-chloro-2,5-dihydroxyphenyl)-D-glucitol" Z16 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2S,3R,4R,5S,6R)-2-(3-chloro-2,5-dihydroxy-phenyl)-6-(hydroxymethyl)oxane-3,4,5-triol" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support Z16 "CARBOHYDRATE ISOMER" D PDB ? Z16 "CARBOHYDRATE RING" pyranose PDB ? Z16 "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Z16 "Create component" 2010-07-01 RCSB Z16 "Modify aromatic_flag" 2011-06-04 RCSB Z16 "Modify descriptor" 2011-06-04 RCSB Z16 "Other modification" 2020-07-03 RCSB Z16 "Modify internal type" 2020-07-17 RCSB Z16 "Modify linking type" 2020-07-17 RCSB Z16 "Modify atom id" 2020-07-17 RCSB Z16 "Modify component atom id" 2020-07-17 RCSB Z16 "Modify leaving atom flag" 2020-07-17 RCSB ##