data_Z1I # _chem_comp.id Z1I _chem_comp.name "(3S,5S)-5-(aminomethyl)-N-(4-chloro-3-fluorophenyl)-1-[(3R,5S)-3,4,5-trimethylpiperazine-1-carbonyl]piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H31 Cl F N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-03-06 _chem_comp.pdbx_modified_date 2023-06-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 439.955 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Z1I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8GD1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Z1I C10 C1 C 0 1 N N S -2.019 16.481 -12.693 -0.543 -1.036 0.514 C10 Z1I 1 Z1I C11 C2 C 0 1 N N N -3.204 16.206 -13.662 -1.995 -0.898 0.136 C11 Z1I 2 Z1I N13 N1 N 0 1 N N N -2.796 16.051 -15.080 -2.688 0.196 0.511 N13 Z1I 3 Z1I C14 C3 C 0 1 Y N N -3.617 15.821 -16.297 -4.069 0.258 0.293 C14 Z1I 4 Z1I C16 C4 C 0 1 Y N N -5.709 15.704 -17.471 -6.040 1.536 -0.196 C16 Z1I 5 Z1I C20 C5 C 0 1 Y N N -3.673 15.370 -18.665 -6.200 -0.834 0.147 C20 Z1I 6 Z1I C21 C6 C 0 1 Y N N -2.952 15.568 -17.490 -4.836 -0.898 0.357 C21 Z1I 7 Z1I C22 C7 C 0 1 N N N -1.701 17.952 -12.737 -0.044 -2.430 0.126 C22 Z1I 8 Z1I C24 C8 C 0 1 N N N -0.152 19.744 -12.002 1.910 -3.988 0.181 C24 Z1I 9 Z1I C01 C9 C 0 1 N N N -1.974 11.827 -6.908 7.554 1.688 -1.178 C01 Z1I 10 Z1I C03 C10 C 0 1 N N S -0.156 12.282 -7.964 5.513 0.388 -1.271 C03 Z1I 11 Z1I C04 C11 C 0 1 N N N 0.576 10.975 -7.450 6.299 -0.652 -2.072 C04 Z1I 12 Z1I C05 C12 C 0 1 N N N 0.527 12.747 -9.298 4.463 -0.319 -0.407 C05 Z1I 13 Z1I C07 C13 C 0 1 N N N 0.025 15.137 -10.117 2.481 0.785 0.525 C07 Z1I 14 Z1I C09 C14 C 0 1 N N N -2.180 16.095 -11.222 0.281 0.021 -0.228 C09 Z1I 15 Z1I C15 C15 C 0 1 Y N N -4.995 15.904 -16.294 -4.675 1.477 0.019 C15 Z1I 16 Z1I C18 C16 C 0 1 Y N N -5.050 15.437 -18.657 -6.802 0.379 -0.137 C18 Z1I 17 Z1I C23 C17 C 0 1 N N S -0.324 18.237 -12.177 1.421 -2.582 0.539 C23 Z1I 18 Z1I C26 C18 C 0 1 N N N -0.148 17.554 -10.807 2.268 -1.543 -0.202 C26 Z1I 19 Z1I C28 C19 C 0 1 N N N -1.688 13.169 -10.238 4.688 1.564 1.260 C28 Z1I 20 Z1I C29 C20 C 0 1 N N R -2.223 12.900 -8.764 5.729 2.197 0.330 C29 Z1I 21 Z1I C30 C21 C 0 1 N N N -3.665 12.328 -8.893 6.735 2.998 1.159 C30 Z1I 22 Z1I F17 F1 F 0 1 N N N -7.070 15.772 -17.461 -6.632 2.721 -0.462 F17 Z1I 23 Z1I N02 N2 N 0 1 N N N -1.468 12.008 -8.090 6.433 1.137 -0.405 N02 Z1I 24 Z1I N06 N3 N 0 1 N N N -0.376 13.716 -9.934 3.824 0.681 0.462 N06 Z1I 25 Z1I N08 N4 N 0 1 N N N -0.799 16.241 -10.705 1.705 -0.209 0.049 N08 Z1I 26 Z1I N25 N5 N 0 1 N N N 0.768 20.001 -10.901 3.277 -4.174 0.685 N25 Z1I 27 Z1I O12 O1 O 0 1 N N N -4.330 16.142 -13.288 -2.541 -1.771 -0.505 O12 Z1I 28 Z1I O27 O2 O 0 1 N N N 1.120 15.411 -9.775 1.971 1.775 1.012 O27 Z1I 29 Z1I CL1 CL1 CL 0 0 N N N -5.951 15.177 -20.176 -8.516 0.455 -0.400 CL1 Z1I 30 Z1I H1 H1 H 0 1 N N N -1.146 15.937 -13.084 -0.431 -0.896 1.589 H1 Z1I 31 Z1I H2 H2 H 0 1 N N N -1.811 16.111 -15.243 -2.229 0.940 0.932 H2 Z1I 32 Z1I H3 H3 H 0 1 N N N -3.151 15.163 -19.587 -6.795 -1.734 0.192 H3 Z1I 33 Z1I H4 H4 H 0 1 N N N -1.873 15.525 -17.506 -4.366 -1.846 0.570 H4 Z1I 34 Z1I H5 H5 H 0 1 N N N -1.741 18.296 -13.781 -0.645 -3.185 0.634 H5 Z1I 35 Z1I H6 H6 H 0 1 N N N -2.449 18.498 -12.143 -0.133 -2.561 -0.952 H6 Z1I 36 Z1I H7 H7 H 0 1 N N N 0.254 20.177 -12.928 1.251 -4.728 0.636 H7 Z1I 37 Z1I H8 H8 H 0 1 N N N -1.127 20.201 -11.780 1.901 -4.110 -0.902 H8 Z1I 38 Z1I H9 H9 H 0 1 N N N -1.362 11.100 -6.354 8.259 2.172 -0.502 H9 Z1I 39 Z1I H10 H10 H 0 1 N N N -1.988 12.784 -6.365 8.057 0.882 -1.712 H10 Z1I 40 Z1I H11 H11 H 0 1 N N N -3.001 11.444 -7.004 7.177 2.418 -1.894 H11 Z1I 41 Z1I H12 H12 H 0 1 N N N 0.007 13.069 -7.213 5.017 1.076 -1.956 H12 Z1I 42 Z1I H13 H13 H 0 1 N N N 0.108 10.636 -6.514 5.605 -1.286 -2.624 H13 Z1I 43 Z1I H14 H14 H 0 1 N N N 0.491 10.184 -8.210 6.964 -0.146 -2.772 H14 Z1I 44 Z1I H15 H15 H 0 1 N N N 1.638 11.197 -7.269 6.888 -1.266 -1.391 H15 Z1I 45 Z1I H16 H16 H 0 1 N N N 0.682 11.884 -9.962 3.712 -0.781 -1.048 H16 Z1I 46 Z1I H17 H17 H 0 1 N N N 1.495 13.221 -9.080 4.945 -1.083 0.202 H17 Z1I 47 Z1I H18 H18 H 0 1 N N N -2.873 16.775 -10.705 0.100 -0.060 -1.300 H18 Z1I 48 Z1I H19 H19 H 0 1 N N N -2.537 15.060 -11.118 -0.003 1.015 0.118 H19 Z1I 49 Z1I H20 H20 H 0 1 N N N -5.520 16.125 -15.376 -4.082 2.378 -0.026 H20 Z1I 50 Z1I H21 H21 H 0 1 N N N 0.442 17.860 -12.871 1.514 -2.428 1.614 H21 Z1I 51 Z1I H22 H22 H 0 1 N N N 0.928 17.422 -10.622 3.295 -1.581 0.161 H22 Z1I 52 Z1I H23 H23 H 0 1 N N N -0.574 18.212 -10.035 2.249 -1.752 -1.272 H23 Z1I 53 Z1I H24 H24 H 0 1 N N N -2.318 13.893 -10.775 5.192 0.983 2.032 H24 Z1I 54 Z1I H25 H25 H 0 1 N N N -1.618 12.240 -10.823 4.085 2.346 1.721 H25 Z1I 55 Z1I H26 H26 H 0 1 N N N -2.275 13.864 -8.237 5.230 2.860 -0.377 H26 Z1I 56 Z1I H27 H27 H 0 1 N N N -4.072 12.128 -7.891 7.234 2.334 1.865 H27 Z1I 57 Z1I H28 H28 H 0 1 N N N -4.305 13.059 -9.409 7.475 3.447 0.497 H28 Z1I 58 Z1I H29 H29 H 0 1 N N N -3.638 11.392 -9.471 6.212 3.782 1.706 H29 Z1I 59 Z1I H31 H31 H 0 1 N N N 0.882 20.988 -10.785 3.323 -4.002 1.678 H31 Z1I 60 Z1I H32 H32 H 0 1 N N N 0.399 19.607 -10.059 3.622 -5.095 0.461 H32 Z1I 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Z1I CL1 C18 SING N N 1 Z1I C20 C18 DOUB Y N 2 Z1I C20 C21 SING Y N 3 Z1I C18 C16 SING Y N 4 Z1I C21 C14 DOUB Y N 5 Z1I C16 F17 SING N N 6 Z1I C16 C15 DOUB Y N 7 Z1I C14 C15 SING Y N 8 Z1I C14 N13 SING N N 9 Z1I N13 C11 SING N N 10 Z1I C11 O12 DOUB N N 11 Z1I C11 C10 SING N N 12 Z1I C22 C10 SING N N 13 Z1I C22 C23 SING N N 14 Z1I C10 C09 SING N N 15 Z1I C23 C24 SING N N 16 Z1I C23 C26 SING N N 17 Z1I C24 N25 SING N N 18 Z1I C09 N08 SING N N 19 Z1I C26 N08 SING N N 20 Z1I N08 C07 SING N N 21 Z1I C28 N06 SING N N 22 Z1I C28 C29 SING N N 23 Z1I C07 N06 SING N N 24 Z1I C07 O27 DOUB N N 25 Z1I N06 C05 SING N N 26 Z1I C05 C03 SING N N 27 Z1I C30 C29 SING N N 28 Z1I C29 N02 SING N N 29 Z1I N02 C03 SING N N 30 Z1I N02 C01 SING N N 31 Z1I C03 C04 SING N N 32 Z1I C10 H1 SING N N 33 Z1I N13 H2 SING N N 34 Z1I C20 H3 SING N N 35 Z1I C21 H4 SING N N 36 Z1I C22 H5 SING N N 37 Z1I C22 H6 SING N N 38 Z1I C24 H7 SING N N 39 Z1I C24 H8 SING N N 40 Z1I C01 H9 SING N N 41 Z1I C01 H10 SING N N 42 Z1I C01 H11 SING N N 43 Z1I C03 H12 SING N N 44 Z1I C04 H13 SING N N 45 Z1I C04 H14 SING N N 46 Z1I C04 H15 SING N N 47 Z1I C05 H16 SING N N 48 Z1I C05 H17 SING N N 49 Z1I C09 H18 SING N N 50 Z1I C09 H19 SING N N 51 Z1I C15 H20 SING N N 52 Z1I C23 H21 SING N N 53 Z1I C26 H22 SING N N 54 Z1I C26 H23 SING N N 55 Z1I C28 H24 SING N N 56 Z1I C28 H25 SING N N 57 Z1I C29 H26 SING N N 58 Z1I C30 H27 SING N N 59 Z1I C30 H28 SING N N 60 Z1I C30 H29 SING N N 61 Z1I N25 H31 SING N N 62 Z1I N25 H32 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Z1I SMILES ACDLabs 12.01 "CC1CN(CC(C)N1C)C(=O)N1CC(CC(CN)C1)C(=O)Nc1ccc(Cl)c(F)c1" Z1I InChI InChI 1.06 "InChI=1S/C21H31ClFN5O2/c1-13-9-27(10-14(2)26(13)3)21(30)28-11-15(8-24)6-16(12-28)20(29)25-17-4-5-18(22)19(23)7-17/h4-5,7,13-16H,6,8-12,24H2,1-3H3,(H,25,29)/t13-,14+,15-,16-/m0/s1" Z1I InChIKey InChI 1.06 HRIQFADDJYTHCU-FZKCQIBNSA-N Z1I SMILES_CANONICAL CACTVS 3.385 "C[C@H]1CN(C[C@@H](C)N1C)C(=O)N2C[C@H](CN)C[C@@H](C2)C(=O)Nc3ccc(Cl)c(F)c3" Z1I SMILES CACTVS 3.385 "C[CH]1CN(C[CH](C)N1C)C(=O)N2C[CH](CN)C[CH](C2)C(=O)Nc3ccc(Cl)c(F)c3" Z1I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H]1CN(C[C@@H](N1C)C)C(=O)N2C[C@@H](C[C@@H](C2)C(=O)Nc3ccc(c(c3)F)Cl)CN" Z1I SMILES "OpenEye OEToolkits" 2.0.7 "CC1CN(CC(N1C)C)C(=O)N2CC(CC(C2)C(=O)Nc3ccc(c(c3)F)Cl)CN" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Z1I "SYSTEMATIC NAME" ACDLabs 12.01 "(3S,5S)-5-(aminomethyl)-N-(4-chloro-3-fluorophenyl)-1-[(3R,5S)-3,4,5-trimethylpiperazine-1-carbonyl]piperidine-3-carboxamide" Z1I "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{S},5~{S})-5-(aminomethyl)-~{N}-(4-chloranyl-3-fluoranyl-phenyl)-1-[(3~{R},5~{S})-3,4,5-trimethylpiperazin-1-yl]carbonyl-piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Z1I "Create component" 2023-03-06 RCSB Z1I "Initial release" 2023-06-07 RCSB #