data_Z2O # _chem_comp.id Z2O _chem_comp.name "{4-[(3S,5R)-3-[(4-chloro-3-fluorophenyl)carbamoyl]-5-(hydroxymethyl)piperidine-1-carbonyl]piperazin-1-yl}acetic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H26 Cl F N4 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-03-06 _chem_comp.pdbx_modified_date 2023-06-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 456.896 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Z2O _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8GD5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Z2O C02 C1 C 0 1 N N N -2.125 13.091 -7.965 7.957 0.707 -1.224 C02 Z2O 1 Z2O C03 C2 C 0 1 N N N -1.214 13.966 -8.817 7.119 1.790 -0.595 C03 Z2O 2 Z2O C05 C3 C 0 1 N N N 0.760 13.289 -9.889 5.075 0.507 -0.790 C05 Z2O 3 Z2O C06 C4 C 0 1 N N N 1.352 14.071 -11.066 4.025 -0.265 0.015 C06 Z2O 4 Z2O C08 C5 C 0 1 N N N 0.524 16.498 -11.480 2.047 0.764 1.037 C08 Z2O 5 Z2O C10 C6 C 0 1 N N N -1.830 17.282 -12.662 -0.127 0.208 0.058 C10 Z2O 6 Z2O C11 C7 C 0 1 N N S -1.658 17.967 -14.037 -1.035 -0.901 0.597 C11 Z2O 7 Z2O C12 C8 C 0 1 N N N -2.751 17.583 -15.075 -2.454 -0.649 0.157 C12 Z2O 8 Z2O C15 C9 C 0 1 Y N N -3.259 17.405 -17.587 -4.435 0.668 0.219 C15 Z2O 9 Z2O C16 C10 C 0 1 Y N N -4.636 17.418 -17.457 -5.264 -0.434 0.053 C16 Z2O 10 Z2O C17 C11 C 0 1 Y N N -5.423 17.117 -18.551 -6.601 -0.252 -0.247 C17 Z2O 11 Z2O C19 C12 C 0 1 Y N N -4.833 16.813 -19.771 -7.114 1.028 -0.382 C19 Z2O 12 Z2O C21 C13 C 0 1 Y N N -3.457 16.805 -19.906 -6.289 2.126 -0.218 C21 Z2O 13 Z2O C22 C14 C 0 1 Y N N -2.674 17.104 -18.808 -4.953 1.949 0.088 C22 Z2O 14 Z2O C23 C15 C 0 1 N N N -1.642 19.418 -13.868 -0.563 -2.251 0.051 C23 Z2O 15 Z2O C24 C16 C 0 1 N N R -0.466 19.834 -13.076 0.866 -2.523 0.525 C24 Z2O 16 Z2O C25 C17 C 0 1 N N N -0.713 21.299 -12.611 1.325 -3.888 0.006 C25 Z2O 17 Z2O C27 C18 C 0 1 N N N -0.247 18.957 -11.818 1.796 -1.432 -0.016 C27 Z2O 18 Z2O C29 C19 C 0 1 N N N -0.703 14.264 -12.135 4.256 1.476 1.829 C29 Z2O 19 Z2O C30 C20 C 0 1 N N N -1.456 13.560 -11.033 5.297 2.179 0.952 C30 Z2O 20 Z2O F18 F1 F 0 1 N N N -6.780 17.126 -18.425 -7.409 -1.323 -0.409 F18 Z2O 21 Z2O N04 N1 N 0 1 N N N -0.676 13.174 -9.894 5.998 1.181 0.133 N04 Z2O 22 Z2O N07 N2 N 0 1 N N N 0.403 15.036 -11.585 3.389 0.662 0.963 N07 Z2O 23 Z2O N09 N3 N 0 1 N N N -0.488 17.468 -11.965 1.267 -0.121 0.384 N09 Z2O 24 Z2O N14 N4 N 0 1 N N N -2.390 17.713 -16.473 -3.081 0.487 0.523 N14 Z2O 25 Z2O O1 O1 O 0 1 N N N -2.003 11.842 -8.048 7.649 -0.452 -1.084 O1 Z2O 26 Z2O O13 O2 O 0 1 N N N -3.807 17.222 -14.700 -3.032 -1.468 -0.526 O13 Z2O 27 Z2O O26 O3 O 0 1 N N N -0.296 21.467 -11.287 2.613 -4.193 0.543 O26 Z2O 28 Z2O O28 O4 O 0 1 N N N 1.496 16.967 -10.972 1.539 1.653 1.692 O28 Z2O 29 Z2O O31 O5 O 0 1 N N N -2.992 13.604 -7.202 9.043 1.032 -1.943 O31 Z2O 30 Z2O CL1 CL1 CL 0 0 N N N -5.856 16.429 -21.178 -8.793 1.255 -0.760 CL1 Z2O 31 Z2O H1 H1 H 0 1 N N N -0.392 14.354 -8.198 7.731 2.368 0.098 H1 Z2O 32 Z2O H2 H2 H 0 1 N N N -1.791 14.807 -9.230 6.733 2.449 -1.372 H2 Z2O 33 Z2O H3 H3 H 0 1 N N N 1.183 12.274 -9.906 5.633 -0.186 -1.419 H3 Z2O 34 Z2O H4 H4 H 0 1 N N N 1.058 13.795 -8.959 4.580 1.249 -1.416 H4 Z2O 35 Z2O H5 H5 H 0 1 N N N 1.621 13.366 -11.866 3.272 -0.672 -0.660 H5 Z2O 36 Z2O H6 H6 H 0 1 N N N 2.254 14.602 -10.727 4.505 -1.078 0.560 H6 Z2O 37 Z2O H7 H7 H 0 1 N N N -2.635 17.763 -12.087 -0.242 0.281 -1.024 H7 Z2O 38 Z2O H8 H8 H 0 1 N N N -2.057 16.213 -12.787 -0.396 1.159 0.518 H8 Z2O 39 Z2O H9 H9 H 0 1 N N N -0.688 17.650 -14.447 -0.988 -0.913 1.686 H9 Z2O 40 Z2O H10 H10 H 0 1 N N N -5.092 17.661 -16.508 -4.864 -1.432 0.159 H10 Z2O 41 Z2O H11 H11 H 0 1 N N N -3.001 16.568 -20.856 -6.690 3.123 -0.325 H11 Z2O 42 Z2O H12 H12 H 0 1 N N N -1.598 17.103 -18.901 -4.310 2.807 0.216 H12 Z2O 43 Z2O H13 H13 H 0 1 N N N -1.600 19.897 -14.857 -1.222 -3.040 0.414 H13 Z2O 44 Z2O H14 H14 H 0 1 N N N -2.559 19.732 -13.347 -0.587 -2.231 -1.038 H14 Z2O 45 Z2O H15 H15 H 0 1 N N N 0.440 19.803 -13.699 0.896 -2.520 1.614 H15 Z2O 46 Z2O H16 H16 H 0 1 N N N -0.148 21.985 -13.259 0.612 -4.652 0.315 H16 Z2O 47 Z2O H17 H17 H 0 1 N N N -1.787 21.526 -12.684 1.382 -3.862 -1.082 H17 Z2O 48 Z2O H18 H18 H 0 1 N N N 0.796 19.094 -11.496 2.795 -1.565 0.399 H18 Z2O 49 Z2O H19 H19 H 0 1 N N N -0.924 19.327 -11.034 1.839 -1.495 -1.103 H19 Z2O 50 Z2O H20 H20 H 0 1 N N N -1.388 14.941 -12.666 4.759 0.832 2.551 H20 Z2O 51 Z2O H21 H21 H 0 1 N N N -0.308 13.516 -12.838 3.656 2.219 2.354 H21 Z2O 52 Z2O H22 H22 H 0 1 N N N -2.252 14.234 -10.684 4.799 2.899 0.302 H22 Z2O 53 Z2O H23 H23 H 0 1 N N N -1.905 12.651 -11.459 6.016 2.699 1.586 H23 Z2O 54 Z2O H25 H25 H 0 1 N N N -1.469 18.041 -16.683 -2.593 1.179 0.997 H25 Z2O 55 Z2O H26 H26 H 0 1 N N N -0.452 22.364 -11.017 2.967 -5.046 0.256 H26 Z2O 56 Z2O H27 H27 H 0 1 N N N -3.472 12.914 -6.759 9.549 0.303 -2.327 H27 Z2O 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Z2O CL1 C19 SING N N 1 Z2O C21 C19 DOUB Y N 2 Z2O C21 C22 SING Y N 3 Z2O C19 C17 SING Y N 4 Z2O C22 C15 DOUB Y N 5 Z2O C17 F18 SING N N 6 Z2O C17 C16 DOUB Y N 7 Z2O C15 C16 SING Y N 8 Z2O C15 N14 SING N N 9 Z2O N14 C12 SING N N 10 Z2O C12 O13 DOUB N N 11 Z2O C12 C11 SING N N 12 Z2O C11 C23 SING N N 13 Z2O C11 C10 SING N N 14 Z2O C23 C24 SING N N 15 Z2O C24 C25 SING N N 16 Z2O C24 C27 SING N N 17 Z2O C10 N09 SING N N 18 Z2O C25 O26 SING N N 19 Z2O C29 N07 SING N N 20 Z2O C29 C30 SING N N 21 Z2O N09 C27 SING N N 22 Z2O N09 C08 SING N N 23 Z2O N07 C08 SING N N 24 Z2O N07 C06 SING N N 25 Z2O C08 O28 DOUB N N 26 Z2O C06 C05 SING N N 27 Z2O C30 N04 SING N N 28 Z2O N04 C05 SING N N 29 Z2O N04 C03 SING N N 30 Z2O C03 C02 SING N N 31 Z2O O1 C02 DOUB N N 32 Z2O C02 O31 SING N N 33 Z2O C03 H1 SING N N 34 Z2O C03 H2 SING N N 35 Z2O C05 H3 SING N N 36 Z2O C05 H4 SING N N 37 Z2O C06 H5 SING N N 38 Z2O C06 H6 SING N N 39 Z2O C10 H7 SING N N 40 Z2O C10 H8 SING N N 41 Z2O C11 H9 SING N N 42 Z2O C16 H10 SING N N 43 Z2O C21 H11 SING N N 44 Z2O C22 H12 SING N N 45 Z2O C23 H13 SING N N 46 Z2O C23 H14 SING N N 47 Z2O C24 H15 SING N N 48 Z2O C25 H16 SING N N 49 Z2O C25 H17 SING N N 50 Z2O C27 H18 SING N N 51 Z2O C27 H19 SING N N 52 Z2O C29 H20 SING N N 53 Z2O C29 H21 SING N N 54 Z2O C30 H22 SING N N 55 Z2O C30 H23 SING N N 56 Z2O N14 H25 SING N N 57 Z2O O26 H26 SING N N 58 Z2O O31 H27 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Z2O SMILES ACDLabs 12.01 "OC(=O)CN1CCN(CC1)C(=O)N1CC(CC(CO)C1)C(=O)Nc1ccc(Cl)c(F)c1" Z2O InChI InChI 1.06 "InChI=1S/C20H26ClFN4O5/c21-16-2-1-15(8-17(16)22)23-19(30)14-7-13(12-27)9-26(10-14)20(31)25-5-3-24(4-6-25)11-18(28)29/h1-2,8,13-14,27H,3-7,9-12H2,(H,23,30)(H,28,29)/t13-,14+/m1/s1" Z2O InChIKey InChI 1.06 CDXSZJHTSAQVKF-KGLIPLIRSA-N Z2O SMILES_CANONICAL CACTVS 3.385 "OC[C@@H]1C[C@@H](CN(C1)C(=O)N2CCN(CC2)CC(O)=O)C(=O)Nc3ccc(Cl)c(F)c3" Z2O SMILES CACTVS 3.385 "OC[CH]1C[CH](CN(C1)C(=O)N2CCN(CC2)CC(O)=O)C(=O)Nc3ccc(Cl)c(F)c3" Z2O SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1NC(=O)[C@H]2C[C@H](CN(C2)C(=O)N3CCN(CC3)CC(=O)O)CO)F)Cl" Z2O SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1NC(=O)C2CC(CN(C2)C(=O)N3CCN(CC3)CC(=O)O)CO)F)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Z2O "SYSTEMATIC NAME" ACDLabs 12.01 "{4-[(3S,5R)-3-[(4-chloro-3-fluorophenyl)carbamoyl]-5-(hydroxymethyl)piperidine-1-carbonyl]piperazin-1-yl}acetic acid" Z2O "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[4-[(3~{S},5~{R})-3-[(4-chloranyl-3-fluoranyl-phenyl)carbamoyl]-5-(hydroxymethyl)piperidin-1-yl]carbonylpiperazin-1-yl]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Z2O "Create component" 2023-03-06 RCSB Z2O "Initial release" 2023-06-07 RCSB #