data_Z4K # _chem_comp.id Z4K _chem_comp.name 2-O-sulfo-alpha-D-glucopyranose _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H12 O9 S" _chem_comp.mon_nstd_parent_comp_id GLC _chem_comp.pdbx_synonyms "2-O-sulfo-alpha-D-glucose; 2-O-sulfo-D-glucose; 2-O-sulfo-glucose" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-12-17 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 260.219 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Z4K _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3T8X _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 Z4K 2-O-sulfo-alpha-D-glucose PDB ? 2 Z4K 2-O-sulfo-D-glucose PDB ? 3 Z4K 2-O-sulfo-glucose PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Z4K O1 O1 O 0 1 N Y N 28.375 -54.597 33.096 0.502 1.383 1.654 O1 Z4K 1 Z4K O2 O2 O 0 1 N N N 26.627 -54.917 31.173 -1.634 -0.146 0.676 O2 Z4K 2 Z4K O3 O3 O 0 1 N N N 26.084 -52.272 29.816 -0.114 -2.512 0.151 O3 Z4K 3 Z4K O4 O4 O 0 1 N N N 27.364 -50.033 31.247 2.726 -2.192 0.267 O4 Z4K 4 Z4K O5 O5 O 0 1 N N N 27.232 -52.649 34.028 1.587 1.225 -0.406 O5 Z4K 5 Z4K O6 O6 O 0 1 N N N 26.666 -50.228 34.834 4.441 1.558 -0.350 O6 Z4K 6 Z4K C1 C1 C 0 1 N N S 27.096 -53.887 33.314 0.315 1.218 0.247 C1 Z4K 7 Z4K C2 C2 C 0 1 N N R 26.383 -53.706 31.933 -0.388 -0.114 -0.023 C2 Z4K 8 Z4K C3 C3 C 0 1 N N S 26.823 -52.450 31.097 0.502 -1.261 0.465 C3 Z4K 9 Z4K C4 C4 C 0 1 N N S 26.878 -51.184 32.005 1.862 -1.170 -0.234 C4 Z4K 10 Z4K C5 C5 C 0 1 N N R 27.771 -51.528 33.239 2.479 0.203 0.044 C5 Z4K 11 Z4K C6 C6 C 0 1 N N N 27.939 -50.386 34.208 3.810 0.325 -0.701 C6 Z4K 12 Z4K S1 S1 S 0 1 N N N 25.687 -55.973 31.532 -2.827 0.285 -0.164 S1 Z4K 13 Z4K O7 O7 O 0 1 N N N 26.295 -56.771 32.628 -3.147 -0.861 -1.114 O7 Z4K 14 Z4K O8 O8 O 0 1 N N N 25.454 -56.854 30.320 -3.930 0.387 0.726 O8 Z4K 15 Z4K O9 O9 O 0 1 N N N 24.381 -55.312 31.967 -2.379 1.364 -0.974 O9 Z4K 16 Z4K HO1 H1O H 0 1 N Y N 28.213 -55.403 32.621 0.944 2.207 1.898 HO1 Z4K 17 Z4K HO3 H3O H 0 1 N Y N 26.404 -51.497 29.370 0.397 -3.283 0.433 HO3 Z4K 18 Z4K HO4 H4O H 0 1 N Y N 27.392 -49.270 31.812 3.607 -2.193 -0.132 HO4 Z4K 19 Z4K HO6 H6O H 0 1 N Y N 26.708 -49.516 35.462 5.292 1.702 -0.786 HO6 Z4K 20 Z4K H1 H11 H 0 1 N N N 26.452 -54.550 33.910 -0.294 2.036 -0.137 H1 Z4K 21 Z4K H2 H21 H 0 1 N N N 25.304 -53.614 32.125 -0.568 -0.221 -1.093 H2 Z4K 22 Z4K H3 H31 H 0 1 N N N 27.868 -52.647 30.816 0.639 -1.183 1.544 H3 Z4K 23 Z4K H4 H41 H 0 1 N N N 25.860 -50.979 32.367 1.729 -1.300 -1.308 H4 Z4K 24 Z4K H5 H51 H 0 1 N N N 28.765 -51.809 32.862 2.649 0.316 1.114 H5 Z4K 25 Z4K H61 H61 H 0 1 N N N 28.708 -50.627 34.956 3.629 0.302 -1.775 H61 Z4K 26 Z4K H62 H62 H 0 1 N N N 28.222 -49.467 33.674 4.458 -0.507 -0.424 H62 Z4K 27 Z4K H7O H7O H 0 1 N N N 26.411 -57.669 32.340 -3.897 -0.688 -1.700 H7O Z4K 28 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Z4K O1 C1 SING N N 1 Z4K O2 S1 SING N N 2 Z4K O2 C2 SING N N 3 Z4K O3 C3 SING N N 4 Z4K O4 C4 SING N N 5 Z4K C1 O5 SING N N 6 Z4K C2 C1 SING N N 7 Z4K C3 C2 SING N N 8 Z4K C3 C4 SING N N 9 Z4K C4 C5 SING N N 10 Z4K C5 O5 SING N N 11 Z4K C5 C6 SING N N 12 Z4K C6 O6 SING N N 13 Z4K S1 O9 DOUB N N 14 Z4K S1 O7 SING N N 15 Z4K O8 S1 DOUB N N 16 Z4K O3 HO3 SING N N 17 Z4K O4 HO4 SING N N 18 Z4K O6 HO6 SING N N 19 Z4K C1 H1 SING N N 20 Z4K C2 H2 SING N N 21 Z4K C3 H3 SING N N 22 Z4K C4 H4 SING N N 23 Z4K C5 H5 SING N N 24 Z4K C6 H61 SING N N 25 Z4K C6 H62 SING N N 26 Z4K O7 H7O SING N N 27 Z4K HO1 O1 SING N N 28 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Z4K SMILES ACDLabs 12.01 "O=S(=O)(OC1C(O)C(O)C(OC1O)CO)O" Z4K InChI InChI 1.03 "InChI=1S/C6H12O9S/c7-1-2-3(8)4(9)5(6(10)14-2)15-16(11,12)13/h2-10H,1H2,(H,11,12,13)/t2-,3-,4+,5-,6+/m1/s1" Z4K InChIKey InChI 1.03 MOGKHCGKIJXABF-DVKNGEFBSA-N Z4K SMILES_CANONICAL CACTVS 3.370 "OC[C@H]1O[C@H](O)[C@H](O[S](O)(=O)=O)[C@@H](O)[C@@H]1O" Z4K SMILES CACTVS 3.370 "OC[CH]1O[CH](O)[CH](O[S](O)(=O)=O)[CH](O)[CH]1O" Z4K SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)OS(=O)(=O)O)O)O)O" Z4K SMILES "OpenEye OEToolkits" 1.7.6 "C(C1C(C(C(C(O1)O)OS(=O)(=O)O)O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Z4K "SYSTEMATIC NAME" ACDLabs 12.01 2-O-sulfo-alpha-D-glucopyranose Z4K "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2S,3R,4S,5S,6R)-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl] hydrogen sulfate" # _pdbx_chem_comp_related.comp_id Z4K _pdbx_chem_comp_related.related_comp_id GLC _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 Z4K C1 GLC C1 "Carbohydrate core" 2 Z4K C2 GLC C2 "Carbohydrate core" 3 Z4K C3 GLC C3 "Carbohydrate core" 4 Z4K C4 GLC C4 "Carbohydrate core" 5 Z4K C5 GLC C5 "Carbohydrate core" 6 Z4K C6 GLC C6 "Carbohydrate core" 7 Z4K O1 GLC O1 "Carbohydrate core" 8 Z4K O2 GLC O2 "Carbohydrate core" 9 Z4K O3 GLC O3 "Carbohydrate core" 10 Z4K O4 GLC O4 "Carbohydrate core" 11 Z4K O5 GLC O5 "Carbohydrate core" 12 Z4K O6 GLC O6 "Carbohydrate core" 13 Z4K H1 GLC H1 "Carbohydrate core" 14 Z4K HO1 GLC HO1 "Carbohydrate core" 15 Z4K H2 GLC H2 "Carbohydrate core" 16 Z4K H3 GLC H3 "Carbohydrate core" 17 Z4K HO3 GLC HO3 "Carbohydrate core" 18 Z4K H4 GLC H4 "Carbohydrate core" 19 Z4K HO4 GLC HO4 "Carbohydrate core" 20 Z4K H5 GLC H5 "Carbohydrate core" 21 Z4K H61 GLC H61 "Carbohydrate core" 22 Z4K H62 GLC H62 "Carbohydrate core" 23 Z4K HO6 GLC HO6 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support Z4K "CARBOHYDRATE ISOMER" D PDB ? Z4K "CARBOHYDRATE RING" pyranose PDB ? Z4K "CARBOHYDRATE ANOMER" alpha PDB ? Z4K "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Z4K "Create component" 2012-12-17 RCSB Z4K "Initial release" 2016-11-02 RCSB Z4K "Other modification" 2020-07-03 RCSB Z4K "Modify parent residue" 2020-07-17 RCSB Z4K "Modify synonyms" 2020-07-17 RCSB Z4K "Modify linking type" 2020-07-17 RCSB Z4K "Modify atom id" 2020-07-17 RCSB Z4K "Modify component atom id" 2020-07-17 RCSB Z4K "Modify leaving atom flag" 2020-07-17 RCSB ##