data_Z8V # _chem_comp.id Z8V _chem_comp.name "N-[(2R,3S,4R,5R,6R)-4,5-dihydroxy-2,6-bis(hydroxymethyl)piperidin-3-yl]acetamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H18 N2 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-04-12 _chem_comp.pdbx_modified_date 2021-07-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 234.250 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Z8V _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7MFL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Z8V CAA C1 C 0 1 N N N -12.536 9.975 -9.968 4.555 0.211 -0.506 CAA Z8V 1 Z8V CAG C2 C 0 1 N N N -12.758 17.848 -8.809 -3.452 -0.578 0.368 CAG Z8V 2 Z8V CAH C3 C 0 1 N N N -9.874 13.973 -9.184 0.292 2.572 0.278 CAH Z8V 3 Z8V CAK C4 C 0 1 N N N -12.809 11.320 -9.301 3.207 -0.084 0.100 CAK Z8V 4 Z8V CAL C5 C 0 1 N N R -12.555 16.515 -9.520 -2.061 -0.328 -0.220 CAL Z8V 5 Z8V CAM C6 C 0 1 N N R -11.173 14.592 -9.674 -0.207 1.232 -0.264 CAM Z8V 6 Z8V CAN C7 C 0 1 N N R -13.747 15.685 -9.184 -1.130 -1.480 0.167 CAN Z8V 7 Z8V CAO C8 C 0 1 N N R -13.594 14.314 -9.799 0.265 -1.216 -0.406 CAO Z8V 8 Z8V CAP C9 C 0 1 N N S -12.301 13.693 -9.219 0.779 0.127 0.122 CAP Z8V 9 Z8V NAI N1 N 0 1 N N N -12.112 12.360 -9.791 2.090 0.414 -0.467 NAI Z8V 10 Z8V NAJ N2 N 0 1 N N N -11.311 15.915 -9.046 -1.526 0.933 0.308 NAJ Z8V 11 Z8V OAB O1 O 0 1 N N N -13.513 11.385 -8.291 3.127 -0.771 1.096 OAB Z8V 12 Z8V OAC O2 O 0 1 N N N -12.857 17.608 -7.396 -4.350 0.435 -0.089 OAC Z8V 13 Z8V OAD O3 O 0 1 N N N -8.770 14.785 -9.593 -0.565 3.620 -0.179 OAD Z8V 14 Z8V OAE O4 O 0 1 N N N -14.890 16.323 -9.763 -1.640 -2.705 -0.363 OAE Z8V 15 Z8V OAF O5 O 0 1 N N N -14.766 13.513 -9.577 1.153 -2.260 -0.000 OAF Z8V 16 Z8V H1 H1 H 0 1 N N N -13.048 9.178 -9.410 5.332 -0.273 0.085 H1 Z8V 17 Z8V H2 H2 H 0 1 N N N -12.910 9.996 -11.002 4.585 -0.169 -1.527 H2 Z8V 18 Z8V H3 H3 H 0 1 N N N -11.453 9.782 -9.973 4.721 1.288 -0.513 H3 Z8V 19 Z8V H4 H4 H 0 1 N N N -11.903 18.510 -9.013 -3.812 -1.555 0.046 H4 Z8V 20 Z8V H5 H5 H 0 1 N N N -13.683 18.322 -9.169 -3.397 -0.552 1.456 H5 Z8V 21 Z8V H6 H6 H 0 1 N N N -9.892 13.906 -8.086 0.287 2.548 1.368 H6 Z8V 22 Z8V H7 H7 H 0 1 N N N -9.765 12.965 -9.611 1.307 2.753 -0.076 H7 Z8V 23 Z8V H8 H8 H 0 1 N N N -12.509 16.682 -10.606 -2.131 -0.267 -1.306 H8 Z8V 24 Z8V H9 H9 H 0 1 N N N -11.167 14.675 -10.771 -0.286 1.286 -1.349 H9 Z8V 25 Z8V H10 H10 H 0 1 N N N -13.853 15.597 -8.093 -1.070 -1.551 1.253 H10 Z8V 26 Z8V H11 H11 H 0 1 N N N -13.446 14.440 -10.882 0.213 -1.185 -1.494 H11 Z8V 27 Z8V H12 H12 H 0 1 N N N -12.354 13.658 -8.121 0.869 0.081 1.207 H12 Z8V 28 Z8V H13 H13 H 0 1 N N N -11.467 12.223 -10.543 2.154 0.963 -1.264 H13 Z8V 29 Z8V H14 H14 H 0 1 N N N -11.340 15.817 -8.051 -1.488 0.916 1.316 H14 Z8V 30 Z8V H16 H16 H 0 1 N N N -12.984 18.433 -6.942 -5.253 0.340 0.245 H16 Z8V 31 Z8V H17 H17 H 0 1 N N N -7.959 14.396 -9.286 -0.308 4.501 0.127 H17 Z8V 32 Z8V H18 H18 H 0 1 N N N -14.997 17.187 -9.384 -1.099 -3.479 -0.157 H18 Z8V 33 Z8V H19 H19 H 0 1 N N N -14.522 12.712 -9.129 0.888 -3.140 -0.300 H19 Z8V 34 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Z8V CAA CAK SING N N 1 Z8V CAO OAF SING N N 2 Z8V CAO CAP SING N N 3 Z8V CAO CAN SING N N 4 Z8V NAI CAK SING N N 5 Z8V NAI CAP SING N N 6 Z8V OAE CAN SING N N 7 Z8V CAM CAP SING N N 8 Z8V CAM CAH SING N N 9 Z8V CAM NAJ SING N N 10 Z8V OAD CAH SING N N 11 Z8V CAL CAN SING N N 12 Z8V CAL NAJ SING N N 13 Z8V CAL CAG SING N N 14 Z8V CAK OAB DOUB N N 15 Z8V CAG OAC SING N N 16 Z8V CAA H1 SING N N 17 Z8V CAA H2 SING N N 18 Z8V CAA H3 SING N N 19 Z8V CAG H4 SING N N 20 Z8V CAG H5 SING N N 21 Z8V CAH H6 SING N N 22 Z8V CAH H7 SING N N 23 Z8V CAL H8 SING N N 24 Z8V CAM H9 SING N N 25 Z8V CAN H10 SING N N 26 Z8V CAO H11 SING N N 27 Z8V CAP H12 SING N N 28 Z8V NAI H13 SING N N 29 Z8V NAJ H14 SING N N 30 Z8V OAC H16 SING N N 31 Z8V OAD H17 SING N N 32 Z8V OAE H18 SING N N 33 Z8V OAF H19 SING N N 34 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Z8V SMILES ACDLabs 12.01 "OC1C(O)C(NC(C)=O)C(CO)NC1CO" Z8V InChI InChI 1.03 "InChI=1S/C9H18N2O5/c1-4(14)10-7-5(2-12)11-6(3-13)8(15)9(7)16/h5-9,11-13,15-16H,2-3H2,1H3,(H,10,14)/t5-,6+,7-,8+,9+/m0/s1" Z8V InChIKey InChI 1.03 GYKHMAHAJKZLAT-KVEIKIFDSA-N Z8V SMILES_CANONICAL CACTVS 3.385 "CC(=O)N[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)N[C@H]1CO" Z8V SMILES CACTVS 3.385 "CC(=O)N[CH]1[CH](O)[CH](O)[CH](CO)N[CH]1CO" Z8V SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N[C@H]1[C@@H](N[C@@H]([C@H]([C@@H]1O)O)CO)CO" Z8V SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)NC1C(NC(C(C1O)O)CO)CO" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Z8V "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(2R,3S,4R,5R,6R)-4,5-dihydroxy-2,6-bis(hydroxymethyl)piperidin-3-yl]acetamide" Z8V "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(2~{R},3~{S},4~{R},5~{R},6~{R})-2,6-bis(hydroxymethyl)-4,5-bis(oxidanyl)piperidin-3-yl]ethanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Z8V "Create component" 2021-04-12 RCSB Z8V "Initial release" 2021-07-28 RCSB ##