data_Z9A
#
_chem_comp.id Z9A
_chem_comp.name "methyl N~2~-[4-(4-bromophenyl)butanoyl]-D-asparaginyl-L-alaninate"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C18 H24 Br N3 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2021-04-13
_chem_comp.pdbx_modified_date 2022-09-23
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 442.304
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code Z9A
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7MDF
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Z9A C18 C1 C 0 1 N N N 5.632 36.875 62.125 0.270 -1.816 -1.076 C18 Z9A 1
Z9A C19 C2 C 0 1 N N N 5.175 37.062 63.555 1.520 -1.073 -0.602 C19 Z9A 2
Z9A C20 C3 C 0 1 N N N 5.189 35.716 64.249 2.751 -1.638 -1.314 C20 Z9A 3
Z9A C21 C4 C 0 1 Y N N 4.966 35.843 65.750 3.982 -0.906 -0.847 C21 Z9A 4
Z9A C22 C5 C 0 1 Y N N 4.005 35.042 66.359 4.688 -1.369 0.248 C22 Z9A 5
Z9A C15 C6 C 0 1 N N N 7.711 44.986 63.362 -7.569 4.435 1.058 C15 Z9A 6
Z9A C11 C7 C 0 1 N N S 6.913 43.695 59.920 -5.531 1.735 -0.645 C11 Z9A 7
Z9A C12 C8 C 0 1 N N N 6.491 44.877 59.053 -6.491 1.320 -1.762 C12 Z9A 8
Z9A C13 C9 C 0 1 N N N 6.842 44.072 61.393 -6.276 2.552 0.379 C13 Z9A 9
Z9A C02 C10 C 0 1 N N N 5.238 38.064 61.263 -0.942 -1.259 -0.375 C02 Z9A 10
Z9A C04 C11 C 0 1 N N R 5.781 39.936 59.740 -3.327 -1.300 0.122 C04 Z9A 11
Z9A C05 C12 C 0 1 N N N 6.043 39.459 58.324 -4.390 -2.400 0.150 C05 Z9A 12
Z9A C06 C13 C 0 1 N N N 5.271 40.128 57.199 -3.869 -3.581 0.927 C06 Z9A 13
Z9A C09 C14 C 0 1 N N N 6.617 41.195 59.981 -3.896 -0.068 -0.535 C09 Z9A 14
Z9A C23 C15 C 0 1 Y N N 3.804 35.143 67.727 5.818 -0.698 0.676 C23 Z9A 15
Z9A C24 C16 C 0 1 Y N N 4.553 36.039 68.482 6.242 0.438 0.010 C24 Z9A 16
Z9A C26 C17 C 0 1 Y N N 5.515 36.839 67.866 5.535 0.901 -1.085 C26 Z9A 17
Z9A C27 C18 C 0 1 Y N N 5.722 36.743 66.495 4.408 0.226 -1.516 C27 Z9A 18
Z9A N03 N1 N 0 1 N N N 6.231 38.837 60.560 -2.164 -1.765 -0.638 N03 Z9A 19
Z9A N07 N2 N 0 1 N N N 5.913 41.166 56.407 -4.671 -4.639 1.163 N07 Z9A 20
Z9A N10 N3 N 0 1 N N N 6.071 42.521 59.680 -4.978 0.538 -0.007 N10 Z9A 21
Z9A O01 O1 O 0 1 N N N 4.108 38.369 61.164 -0.818 -0.356 0.425 O01 Z9A 22
Z9A O08 O2 O 0 1 N N N 4.157 39.786 56.982 -2.729 -3.581 1.340 O08 Z9A 23
Z9A O14 O3 O 0 1 N N N 7.795 44.921 61.963 -6.870 3.701 0.019 O14 Z9A 24
Z9A O16 O4 O 0 1 N N N 5.970 43.627 62.055 -6.338 2.173 1.525 O16 Z9A 25
Z9A O17 O5 O 0 1 N N N 7.727 41.076 60.404 -3.381 0.377 -1.538 O17 Z9A 26
Z9A BR25 BR1 BR 0 0 N N N 4.254 36.156 70.397 7.787 1.357 0.596 BR25 Z9A 27
Z9A H1 H1 H 0 1 N N N 5.168 35.965 61.716 0.158 -1.689 -2.153 H1 Z9A 28
Z9A H2 H2 H 0 1 N N N 6.727 36.767 62.109 0.368 -2.877 -0.845 H2 Z9A 29
Z9A H3 H3 H 0 1 N N N 5.856 37.753 64.074 1.422 -0.012 -0.834 H3 Z9A 30
Z9A H4 H4 H 0 1 N N N 4.155 37.474 63.567 1.632 -1.200 0.475 H4 Z9A 31
Z9A H5 H5 H 0 1 N N N 4.391 35.089 63.824 2.849 -2.699 -1.082 H5 Z9A 32
Z9A H6 H6 H 0 1 N N N 6.164 35.237 64.075 2.638 -1.510 -2.391 H6 Z9A 33
Z9A H7 H7 H 0 1 N N N 3.421 34.348 65.772 4.357 -2.256 0.768 H7 Z9A 34
Z9A H8 H8 H 0 1 N N N 8.485 45.668 63.745 -8.002 5.341 0.634 H8 Z9A 35
Z9A H9 H9 H 0 1 N N N 6.718 45.359 63.653 -8.362 3.813 1.472 H9 Z9A 36
Z9A H10 H10 H 0 1 N N N 7.864 43.982 63.785 -6.868 4.704 1.848 H10 Z9A 37
Z9A H11 H11 H 0 1 N N N 7.956 43.444 59.677 -4.720 2.330 -1.065 H11 Z9A 38
Z9A H12 H12 H 0 1 N N N 7.145 45.737 59.261 -6.902 2.211 -2.237 H12 Z9A 39
Z9A H13 H13 H 0 1 N N N 6.575 44.601 57.991 -5.952 0.729 -2.503 H13 Z9A 40
Z9A H14 H14 H 0 1 N N N 5.449 45.145 59.281 -7.301 0.725 -1.342 H14 Z9A 41
Z9A H15 H15 H 0 1 N N N 4.712 40.148 59.889 -3.024 -1.061 1.141 H15 Z9A 42
Z9A H16 H16 H 0 1 N N N 5.808 38.385 58.290 -5.293 -2.020 0.629 H16 Z9A 43
Z9A H17 H17 H 0 1 N N N 7.114 39.606 58.121 -4.621 -2.708 -0.869 H17 Z9A 44
Z9A H18 H18 H 0 1 N N N 3.062 34.523 68.209 6.370 -1.060 1.531 H18 Z9A 45
Z9A H19 H19 H 0 1 N N N 6.098 37.532 68.454 5.865 1.788 -1.605 H19 Z9A 46
Z9A H20 H20 H 0 1 N N N 6.464 37.362 66.012 3.859 0.586 -2.373 H20 Z9A 47
Z9A H21 H21 H 0 1 N N N 7.204 38.618 60.638 -2.273 -2.436 -1.329 H21 Z9A 48
Z9A H22 H22 H 0 1 N N N 5.413 41.607 55.661 -5.583 -4.640 0.833 H22 Z9A 49
Z9A H23 H23 H 0 1 N N N 6.854 41.438 56.608 -4.336 -5.399 1.663 H23 Z9A 50
Z9A H24 H24 H 0 1 N N N 5.144 42.622 59.319 -5.390 0.182 0.796 H24 Z9A 51
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Z9A N07 C06 SING N N 1
Z9A O08 C06 DOUB N N 2
Z9A C06 C05 SING N N 3
Z9A C05 C04 SING N N 4
Z9A C12 C11 SING N N 5
Z9A N10 C11 SING N N 6
Z9A N10 C09 SING N N 7
Z9A C04 C09 SING N N 8
Z9A C04 N03 SING N N 9
Z9A C11 C13 SING N N 10
Z9A C09 O17 DOUB N N 11
Z9A N03 C02 SING N N 12
Z9A O01 C02 DOUB N N 13
Z9A C02 C18 SING N N 14
Z9A C13 O14 SING N N 15
Z9A C13 O16 DOUB N N 16
Z9A O14 C15 SING N N 17
Z9A C18 C19 SING N N 18
Z9A C19 C20 SING N N 19
Z9A C20 C21 SING N N 20
Z9A C21 C22 DOUB Y N 21
Z9A C21 C27 SING Y N 22
Z9A C22 C23 SING Y N 23
Z9A C27 C26 DOUB Y N 24
Z9A C23 C24 DOUB Y N 25
Z9A C26 C24 SING Y N 26
Z9A C24 BR25 SING N N 27
Z9A C18 H1 SING N N 28
Z9A C18 H2 SING N N 29
Z9A C19 H3 SING N N 30
Z9A C19 H4 SING N N 31
Z9A C20 H5 SING N N 32
Z9A C20 H6 SING N N 33
Z9A C22 H7 SING N N 34
Z9A C15 H8 SING N N 35
Z9A C15 H9 SING N N 36
Z9A C15 H10 SING N N 37
Z9A C11 H11 SING N N 38
Z9A C12 H12 SING N N 39
Z9A C12 H13 SING N N 40
Z9A C12 H14 SING N N 41
Z9A C04 H15 SING N N 42
Z9A C05 H16 SING N N 43
Z9A C05 H17 SING N N 44
Z9A C23 H18 SING N N 45
Z9A C26 H19 SING N N 46
Z9A C27 H20 SING N N 47
Z9A N03 H21 SING N N 48
Z9A N07 H22 SING N N 49
Z9A N07 H23 SING N N 50
Z9A N10 H24 SING N N 51
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Z9A SMILES ACDLabs 12.01 "Brc1ccc(CCCC(=O)NC(CC(N)=O)C(=O)NC(C)C(=O)OC)cc1"
Z9A InChI InChI 1.03 "InChI=1S/C18H24BrN3O5/c1-11(18(26)27-2)21-17(25)14(10-15(20)23)22-16(24)5-3-4-12-6-8-13(19)9-7-12/h6-9,11,14H,3-5,10H2,1-2H3,(H2,20,23)(H,21,25)(H,22,24)/t11-,14+/m0/s1"
Z9A InChIKey InChI 1.03 UMJYMQGCXBKOHD-SMDDNHRTSA-N
Z9A SMILES_CANONICAL CACTVS 3.385 "COC(=O)[C@H](C)NC(=O)[C@@H](CC(N)=O)NC(=O)CCCc1ccc(Br)cc1"
Z9A SMILES CACTVS 3.385 "COC(=O)[CH](C)NC(=O)[CH](CC(N)=O)NC(=O)CCCc1ccc(Br)cc1"
Z9A SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](C(=O)OC)NC(=O)[C@@H](CC(=O)N)NC(=O)CCCc1ccc(cc1)Br"
Z9A SMILES "OpenEye OEToolkits" 2.0.7 "CC(C(=O)OC)NC(=O)C(CC(=O)N)NC(=O)CCCc1ccc(cc1)Br"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
Z9A "SYSTEMATIC NAME" ACDLabs 12.01 "methyl N~2~-[4-(4-bromophenyl)butanoyl]-D-asparaginyl-L-alaninate"
Z9A "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "methyl (2~{S})-2-[[(2~{R})-4-azanyl-2-[4-(4-bromophenyl)butanoylamino]-4-oxidanylidene-butanoyl]amino]propanoate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Z9A "Create component" 2021-04-13 RCSB
Z9A "Initial release" 2022-09-28 RCSB
#