data_Z9E # _chem_comp.id Z9E _chem_comp.name 1-thio-alpha-D-glucopyranose _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H12 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-12-18 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 196.221 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Z9E _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9CGT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Z9E C1 C1 C 0 1 N N R 61.418 17.709 8.349 -0.614 -1.257 0.666 C1 Z9E 1 Z9E S1 S1 S 0 1 N Y N 60.415 17.110 6.937 -0.757 -1.947 -1.005 S1 Z9E 2 Z9E C2 C2 C 0 1 N N R 62.371 16.655 8.936 -1.519 -0.029 0.791 C2 Z9E 3 Z9E O2 O2 O 0 1 N N N 62.963 15.896 7.886 -2.867 -0.396 0.491 O2 Z9E 4 Z9E C3 C3 C 0 1 N N S 61.641 15.716 9.904 -1.048 1.044 -0.197 C3 Z9E 5 Z9E O3 O3 O 0 1 N N N 62.585 14.859 10.536 -1.841 2.222 -0.036 O3 Z9E 6 Z9E C4 C4 C 0 1 N N S 60.904 16.533 10.963 0.421 1.373 0.085 C4 Z9E 7 Z9E O4 O4 O 0 1 N N N 60.166 15.652 11.849 0.891 2.320 -0.876 O4 Z9E 8 Z9E C5 C5 C 0 1 N N R 59.952 17.523 10.283 1.251 0.090 -0.012 C5 Z9E 9 Z9E O5 O5 O 0 1 N N N 60.680 18.378 9.369 0.742 -0.876 0.910 O5 Z9E 10 Z9E C6 C6 C 0 1 N N N 59.318 18.391 11.360 2.710 0.400 0.328 C6 Z9E 11 Z9E O6 O6 O 0 1 N N N 60.188 19.475 11.663 3.505 -0.770 0.124 O6 Z9E 12 Z9E H1 H1 H 0 1 N N N 62.069 18.464 7.884 -0.917 -2.008 1.396 H1 Z9E 13 Z9E HS1 HS1 H 0 1 N Y N 59.715 18.164 6.636 0.078 -3.002 -0.970 HS1 Z9E 14 Z9E H2 H2 H 0 1 N N N 63.157 17.181 9.498 -1.465 0.362 1.807 H2 Z9E 15 Z9E HO2 HO2 H 0 1 N Y N 63.550 15.247 8.256 -3.228 -1.076 1.075 HO2 Z9E 16 Z9E H3 H3 H 0 1 N N N 60.907 15.124 9.337 -1.151 0.672 -1.216 H3 Z9E 17 Z9E HO3 HO3 H 0 1 N Y N 62.133 14.277 11.136 -2.786 2.085 -0.193 HO3 Z9E 18 Z9E H4 H4 H 0 1 N N N 61.644 17.103 11.543 0.514 1.793 1.087 H4 Z9E 19 Z9E H5 H5 H 0 1 N N N 59.167 16.967 9.750 1.189 -0.307 -1.025 H5 Z9E 20 Z9E H61 H61 H 0 1 N N N 58.356 18.782 10.997 3.071 1.201 -0.318 H61 Z9E 21 Z9E H62 H62 H 0 1 N N N 59.151 17.789 12.266 2.783 0.712 1.369 H62 Z9E 22 Z9E HO6 HO6 H 0 1 N Y N 59.795 20.019 12.335 4.444 -0.647 0.321 HO6 Z9E 23 Z9E HO4 HO4 H 0 1 N N N 59.711 16.169 12.504 0.406 3.157 -0.874 HO4 Z9E 24 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Z9E C1 S1 SING N N 1 Z9E C1 C2 SING N N 2 Z9E C1 O5 SING N N 3 Z9E C1 H1 SING N N 4 Z9E S1 HS1 SING N N 5 Z9E C2 O2 SING N N 6 Z9E C2 C3 SING N N 7 Z9E C2 H2 SING N N 8 Z9E O2 HO2 SING N N 9 Z9E C3 O3 SING N N 10 Z9E C3 C4 SING N N 11 Z9E C3 H3 SING N N 12 Z9E O3 HO3 SING N N 13 Z9E C4 O4 SING N N 14 Z9E C4 C5 SING N N 15 Z9E C4 H4 SING N N 16 Z9E C5 O5 SING N N 17 Z9E C5 C6 SING N N 18 Z9E C5 H5 SING N N 19 Z9E C6 O6 SING N N 20 Z9E C6 H61 SING N N 21 Z9E C6 H62 SING N N 22 Z9E O6 HO6 SING N N 23 Z9E O4 HO4 SING N N 24 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Z9E SMILES ACDLabs 12.01 "OC1C(O)C(OC(S)C1O)CO" Z9E InChI InChI 1.03 "InChI=1S/C6H12O5S/c7-1-2-3(8)4(9)5(10)6(12)11-2/h2-10,12H,1H2/t2-,3-,4+,5-,6-/m1/s1" Z9E InChIKey InChI 1.03 JUSMHIGDXPKSID-VFUOTHLCSA-N Z9E SMILES_CANONICAL CACTVS 3.370 "OC[C@H]1O[C@H](S)[C@H](O)[C@@H](O)[C@@H]1O" Z9E SMILES CACTVS 3.370 "OC[CH]1O[CH](S)[CH](O)[CH](O)[CH]1O" Z9E SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)S)O)O)O)O" Z9E SMILES "OpenEye OEToolkits" 1.7.6 "C(C1C(C(C(C(O1)S)O)O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Z9E "SYSTEMATIC NAME" ACDLabs 12.01 1-thio-alpha-D-glucopyranose Z9E "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-sulfanyl-oxane-3,4,5-triol" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support Z9E "CARBOHYDRATE ISOMER" D PDB ? Z9E "CARBOHYDRATE RING" pyranose PDB ? Z9E "CARBOHYDRATE ANOMER" alpha PDB ? Z9E "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Z9E "Create component" 2012-12-18 RCSB Z9E "Modify atom id" 2020-05-09 RCSB Z9E "Modify component atom id" 2020-07-17 RCSB Z9E "Initial release" 2020-07-29 RCSB ##