data_Z9H # _chem_comp.id Z9H _chem_comp.name "3,4-di-O-methyl-2,6-di-O-sulfo-alpha-D-glucopyranose" _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C8 H16 O12 S2" _chem_comp.mon_nstd_parent_comp_id GLC _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-12-17 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 368.335 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Z9H _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1E03 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Z9H O4 O4 O 0 1 N N N 53.712 -3.021 -8.830 -0.725 -2.644 -0.308 O4 Z9H 1 Z9H C7 C7 C 0 1 N N N 52.310 -3.248 -8.954 -0.592 -3.698 0.648 C7 Z9H 2 Z9H C4 C4 C 0 1 N N R 54.145 -1.800 -9.431 -0.187 -1.394 0.128 C4 Z9H 3 Z9H C5 C5 C 0 1 N N R 54.807 -2.104 -10.784 -1.054 -0.250 -0.405 C5 Z9H 4 Z9H O5 O5 O 0 1 N N N 55.176 -0.856 -11.417 -0.482 1.000 -0.017 O5 Z9H 5 Z9H C6 C6 C 0 1 N N N 53.806 -2.803 -11.734 -2.466 -0.367 0.173 C6 Z9H 6 Z9H O6 O6 O 0 1 N N N 53.824 -2.078 -12.963 -3.306 0.628 -0.415 O6 Z9H 7 Z9H S1 S1 S 0 1 N N N 52.496 -2.092 -13.858 -4.741 0.604 0.090 S1 Z9H 8 Z9H O7 O7 O 0 1 N N N 52.107 -0.725 -13.969 -4.737 1.204 1.489 O7 Z9H 9 Z9H O8 O8 O 0 1 N N N 51.546 -2.899 -13.167 -5.471 1.505 -0.731 O8 Z9H 10 Z9H O12 O12 O 0 1 N N N 52.927 -2.627 -15.103 -5.090 -0.766 0.242 O12 Z9H 11 Z9H C3 C3 C 0 1 N N S 55.171 -1.076 -8.552 1.239 -1.235 -0.407 C3 Z9H 12 Z9H O3 O3 O 0 1 N N N 54.590 -0.794 -7.283 2.073 -2.257 0.144 O3 Z9H 13 Z9H C8 C8 C 0 1 N N N 55.260 -1.470 -6.218 3.149 -2.651 -0.709 C8 Z9H 14 Z9H C2 C2 C 0 1 N N R 55.583 0.229 -9.276 1.776 0.140 0.001 C2 Z9H 15 Z9H O2 O2 O 0 1 N N N 56.662 0.852 -8.554 3.079 0.328 -0.555 O2 Z9H 16 Z9H S2 S2 S 0 1 N N N 56.257 2.134 -7.664 4.024 1.120 0.337 S2 Z9H 17 Z9H O9 O9 O 0 1 N N N 55.243 1.651 -6.789 3.244 2.145 0.938 O9 Z9H 18 Z9H O10 O10 O 0 1 N N N 55.780 3.108 -8.597 4.462 0.196 1.463 O10 Z9H 19 Z9H O11 O11 O 0 1 N N N 57.463 2.502 -6.989 5.184 1.383 -0.441 O11 Z9H 20 Z9H C1 C1 C 0 1 N N S 56.152 -0.125 -10.670 0.833 1.224 -0.528 C1 Z9H 21 Z9H O1 O1 O 0 1 N Y N 57.294 -0.943 -10.404 0.804 1.176 -1.956 O1 Z9H 22 Z9H HO1 HO1 H 0 1 N Y N 57.933 -0.444 -9.908 0.225 1.837 -2.360 HO1 Z9H 23 Z9H H11 H11 H 0 1 N N N 52.048 -4.201 -8.471 -1.033 -3.388 1.595 H11 Z9H 24 Z9H H12 H12 H 0 1 N N N 51.761 -2.428 -8.468 -1.106 -4.587 0.282 H12 Z9H 25 Z9H H13 H13 H 0 1 N N N 52.038 -3.290 -10.019 0.464 -3.924 0.795 H13 Z9H 26 Z9H H4 H4 H 0 1 N N N 53.287 -1.132 -9.599 -0.174 -1.363 1.218 H4 Z9H 27 Z9H H5 H5 H 0 1 N N N 55.686 -2.747 -10.633 -1.101 -0.306 -1.493 H5 Z9H 28 Z9H H61 H61 H 0 1 N N N 54.112 -3.845 -11.905 -2.867 -1.357 -0.045 H61 Z9H 29 Z9H H62 H62 H 0 1 N N N 52.796 -2.785 -11.299 -2.429 -0.220 1.253 H62 Z9H 30 Z9H HO7 HO7 H 0 1 N N N 52.214 -0.437 -14.868 -5.609 1.236 1.905 HO7 Z9H 31 Z9H H3 H3 H 0 1 N N N 56.059 -1.714 -8.437 1.232 -1.318 -1.494 H3 Z9H 32 Z9H H6 H6 H 0 1 N N N 54.776 -1.221 -5.262 3.735 -3.429 -0.219 H6 Z9H 33 Z9H H7 H7 H 0 1 N N N 55.208 -2.556 -6.383 2.748 -3.035 -1.647 H7 Z9H 34 Z9H H63 H63 H 0 1 N N N 56.313 -1.154 -6.188 3.787 -1.791 -0.911 H63 Z9H 35 Z9H H2 H2 H 0 1 N N N 54.716 0.899 -9.377 1.831 0.202 1.087 H2 Z9H 36 Z9H HO10 HO10 H 0 0 N N N 54.852 3.255 -8.456 5.070 0.605 2.094 HO10 Z9H 37 Z9H H1 H1 H 0 1 N N N 56.440 0.799 -11.193 1.188 2.203 -0.204 H1 Z9H 38 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Z9H O4 C7 SING N N 1 Z9H O4 C4 SING N N 2 Z9H C7 H11 SING N N 3 Z9H C7 H12 SING N N 4 Z9H C7 H13 SING N N 5 Z9H C4 C5 SING N N 6 Z9H C4 C3 SING N N 7 Z9H C4 H4 SING N N 8 Z9H C5 O5 SING N N 9 Z9H C5 C6 SING N N 10 Z9H C5 H5 SING N N 11 Z9H O5 C1 SING N N 12 Z9H C6 O6 SING N N 13 Z9H C6 H61 SING N N 14 Z9H C6 H62 SING N N 15 Z9H O6 S1 SING N N 16 Z9H S1 O7 SING N N 17 Z9H S1 O8 DOUB N N 18 Z9H S1 O12 DOUB N N 19 Z9H O7 HO7 SING N N 20 Z9H C3 O3 SING N N 21 Z9H C3 C2 SING N N 22 Z9H C3 H3 SING N N 23 Z9H O3 C8 SING N N 24 Z9H C8 H6 SING N N 25 Z9H C8 H7 SING N N 26 Z9H C8 H63 SING N N 27 Z9H C2 O2 SING N N 28 Z9H C2 C1 SING N N 29 Z9H C2 H2 SING N N 30 Z9H O2 S2 SING N N 31 Z9H S2 O9 DOUB N N 32 Z9H S2 O10 SING N N 33 Z9H S2 O11 DOUB N N 34 Z9H O10 HO10 SING N N 35 Z9H C1 O1 SING N N 36 Z9H C1 H1 SING N N 37 Z9H HO1 O1 SING N N 38 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Z9H SMILES ACDLabs 12.01 "O=S(=O)(O)OCC1OC(O)C(OS(=O)(=O)O)C(OC)C1OC" Z9H InChI InChI 1.03 "InChI=1S/C8H16O12S2/c1-16-5-4(3-18-21(10,11)12)19-8(9)7(6(5)17-2)20-22(13,14)15/h4-9H,3H2,1-2H3,(H,10,11,12)(H,13,14,15)/t4-,5-,6+,7-,8+/m1/s1" Z9H InChIKey InChI 1.03 KXJTXUUGBKCQJT-CBQIKETKSA-N Z9H SMILES_CANONICAL CACTVS 3.370 "CO[C@@H]1[C@@H](CO[S](O)(=O)=O)O[C@H](O)[C@H](O[S](O)(=O)=O)[C@H]1OC" Z9H SMILES CACTVS 3.370 "CO[CH]1[CH](CO[S](O)(=O)=O)O[CH](O)[CH](O[S](O)(=O)=O)[CH]1OC" Z9H SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CO[C@@H]1[C@H](O[C@@H]([C@@H]([C@H]1OC)OS(=O)(=O)O)O)COS(=O)(=O)O" Z9H SMILES "OpenEye OEToolkits" 1.7.6 "COC1C(OC(C(C1OC)OS(=O)(=O)O)O)COS(=O)(=O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Z9H "SYSTEMATIC NAME" ACDLabs 12.01 "3,4-di-O-methyl-2,6-di-O-sulfo-alpha-D-glucopyranose" Z9H "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2S,3R,4S,5R,6R)-4,5-dimethoxy-2-oxidanyl-6-(sulfooxymethyl)oxan-3-yl] hydrogen sulfate" # _pdbx_chem_comp_related.comp_id Z9H _pdbx_chem_comp_related.related_comp_id GLC _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 Z9H C1 GLC C1 "Carbohydrate core" 2 Z9H C2 GLC C2 "Carbohydrate core" 3 Z9H C3 GLC C3 "Carbohydrate core" 4 Z9H C4 GLC C4 "Carbohydrate core" 5 Z9H C5 GLC C5 "Carbohydrate core" 6 Z9H C6 GLC C6 "Carbohydrate core" 7 Z9H O1 GLC O1 "Carbohydrate core" 8 Z9H O2 GLC O2 "Carbohydrate core" 9 Z9H O3 GLC O3 "Carbohydrate core" 10 Z9H O4 GLC O4 "Carbohydrate core" 11 Z9H O5 GLC O5 "Carbohydrate core" 12 Z9H O6 GLC O6 "Carbohydrate core" 13 Z9H H1 GLC H1 "Carbohydrate core" 14 Z9H H2 GLC H2 "Carbohydrate core" 15 Z9H H3 GLC H3 "Carbohydrate core" 16 Z9H H4 GLC H4 "Carbohydrate core" 17 Z9H H5 GLC H5 "Carbohydrate core" 18 Z9H H61 GLC H61 "Carbohydrate core" 19 Z9H H62 GLC H62 "Carbohydrate core" 20 Z9H HO1 GLC HO1 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support Z9H "CARBOHYDRATE ISOMER" D PDB ? Z9H "CARBOHYDRATE RING" pyranose PDB ? Z9H "CARBOHYDRATE ANOMER" alpha PDB ? Z9H "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Z9H "Create component" 2012-12-17 RCSB Z9H "Modify atom id" 2020-05-09 RCSB Z9H "Modify component atom id" 2020-07-17 RCSB Z9H "Initial release" 2020-07-29 RCSB ##