data_ZB1 # _chem_comp.id ZB1 _chem_comp.name 3-O-methyl-alpha-D-glucopyranose _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C7 H14 O6" _chem_comp.mon_nstd_parent_comp_id GLC _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-12-18 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 194.182 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZB1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2QKH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZB1 C1 C1 C 0 1 N N S -2.230 3.397 37.147 0.021 -1.757 0.226 C1 ZB1 1 ZB1 C2 C2 C 0 1 N N R -0.873 4.006 37.502 -1.170 -0.887 0.634 C2 ZB1 2 ZB1 C3 C3 C 0 1 N N S -0.479 5.006 36.420 -1.067 0.469 -0.070 C3 ZB1 3 ZB1 C3M C3M C 0 1 N N N 0.635 7.020 36.949 -3.313 1.218 -0.442 C3M ZB1 4 ZB1 C4 C4 C 0 1 N N R -0.460 4.309 35.061 0.275 1.116 0.286 C4 ZB1 5 ZB1 C5 C5 C 0 1 N N R -1.827 3.677 34.839 1.411 0.168 -0.108 C5 ZB1 6 ZB1 C6 C6 C 0 1 N N N -1.994 2.999 33.482 2.752 0.781 0.300 C6 ZB1 7 ZB1 O1 O1 O 0 1 N Y N -3.223 4.432 37.031 -0.023 -1.996 -1.182 O1 ZB1 8 ZB1 O2 O2 O 0 1 N N N -0.954 4.652 38.772 -2.386 -1.532 0.251 O2 ZB1 9 ZB1 O3 O3 O 0 1 N N N 0.781 5.625 36.699 -2.135 1.315 0.361 O3 ZB1 10 ZB1 O4 O4 O 0 1 N N N -0.196 5.277 34.054 0.414 2.349 -0.423 O4 ZB1 11 ZB1 O5 O5 O 0 1 N N N -2.074 2.742 35.886 1.237 -1.084 0.558 O5 ZB1 12 ZB1 O6 O6 O 0 1 N N N -1.014 1.972 33.351 3.817 -0.047 -0.171 O6 ZB1 13 ZB1 H1 H1 H 0 1 N N N -2.517 2.675 37.925 -0.024 -2.708 0.758 H1 ZB1 14 ZB1 HO1 HO1 H 0 1 N Y N -3.327 4.867 37.869 0.704 -2.541 -1.511 HO1 ZB1 15 ZB1 H2 H2 H 0 1 N N N -0.122 3.203 37.533 -1.160 -0.738 1.714 H2 ZB1 16 ZB1 HO2 HO2 H 0 1 N Y N -1.200 4.018 39.435 -2.516 -2.400 0.657 HO2 ZB1 17 ZB1 H3 H3 H 0 1 N N N -1.257 5.783 36.385 -1.128 0.327 -1.149 H3 ZB1 18 ZB1 H3M1 H3M1 H 0 0 N N N 1.621 7.461 37.159 -3.077 1.497 -1.469 H3M1 ZB1 19 ZB1 H3M2 H3M2 H 0 0 N N N 0.197 7.507 36.065 -3.685 0.194 -0.419 H3M2 ZB1 20 ZB1 H3M3 H3M3 H 0 0 N N N -0.026 7.170 37.816 -4.076 1.890 -0.049 H3M3 ZB1 21 ZB1 H4 H4 H 0 1 N N N 0.311 3.524 35.063 0.314 1.306 1.359 H4 ZB1 22 ZB1 HO4 HO4 H 0 1 N Y N 0.659 5.664 34.203 1.243 2.814 -0.244 HO4 ZB1 23 ZB1 H5 H5 H 0 1 N N N -2.576 4.480 34.900 1.395 0.012 -1.187 H5 ZB1 24 ZB1 H61 H61 H 0 1 N N N -1.860 3.741 32.681 2.845 1.776 -0.137 H61 ZB1 25 ZB1 H62 H62 H 0 1 N N N -3.000 2.560 33.411 2.802 0.855 1.386 H62 ZB1 26 ZB1 HO6 HO6 H 0 1 N Y N -1.112 1.546 32.508 4.699 0.282 0.052 HO6 ZB1 27 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZB1 C1 H1 SING N N 1 ZB1 C1 O1 SING N N 2 ZB1 O1 HO1 SING N N 3 ZB1 C1 O5 SING N N 4 ZB1 C1 C2 SING N N 5 ZB1 C2 H2 SING N N 6 ZB1 C2 O2 SING N N 7 ZB1 O2 HO2 SING N N 8 ZB1 C2 C3 SING N N 9 ZB1 C3 H3 SING N N 10 ZB1 C3 O3 SING N N 11 ZB1 O3 C3M SING N N 12 ZB1 C3M H3M1 SING N N 13 ZB1 C3M H3M2 SING N N 14 ZB1 C3M H3M3 SING N N 15 ZB1 C3 C4 SING N N 16 ZB1 C4 H4 SING N N 17 ZB1 C4 O4 SING N N 18 ZB1 O4 HO4 SING N N 19 ZB1 C4 C5 SING N N 20 ZB1 C5 H5 SING N N 21 ZB1 C5 O5 SING N N 22 ZB1 C5 C6 SING N N 23 ZB1 C6 H61 SING N N 24 ZB1 C6 H62 SING N N 25 ZB1 C6 O6 SING N N 26 ZB1 O6 HO6 SING N N 27 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZB1 SMILES ACDLabs 12.01 "O(C1C(O)C(OC(O)C1O)CO)C" ZB1 InChI InChI 1.03 "InChI=1S/C7H14O6/c1-12-6-4(9)3(2-8)13-7(11)5(6)10/h3-11H,2H2,1H3/t3-,4-,5-,6+,7+/m1/s1" ZB1 InChIKey InChI 1.03 SCBBSJMAPKXHAH-OVHBTUCOSA-N ZB1 SMILES_CANONICAL CACTVS 3.370 "CO[C@@H]1[C@@H](O)[C@@H](O)O[C@H](CO)[C@H]1O" ZB1 SMILES CACTVS 3.370 "CO[CH]1[CH](O)[CH](O)O[CH](CO)[CH]1O" ZB1 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CO[C@H]1[C@@H]([C@H](O[C@@H]([C@@H]1O)O)CO)O" ZB1 SMILES "OpenEye OEToolkits" 1.7.6 "COC1C(C(OC(C1O)O)CO)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZB1 "SYSTEMATIC NAME" ACDLabs 12.01 3-O-methyl-alpha-D-glucopyranose ZB1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S,3R,4S,5R,6R)-6-(hydroxymethyl)-4-methoxy-oxane-2,3,5-triol" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support ZB1 "CARBOHYDRATE ISOMER" D PDB ? ZB1 "CARBOHYDRATE RING" pyranose PDB ? ZB1 "CARBOHYDRATE ANOMER" alpha PDB ? ZB1 "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # _pdbx_chem_comp_related.comp_id ZB1 _pdbx_chem_comp_related.related_comp_id GLC _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 ZB1 C1 GLC C1 "Carbohydrate core" 2 ZB1 C2 GLC C2 "Carbohydrate core" 3 ZB1 C3 GLC C3 "Carbohydrate core" 4 ZB1 C4 GLC C4 "Carbohydrate core" 5 ZB1 C5 GLC C5 "Carbohydrate core" 6 ZB1 C6 GLC C6 "Carbohydrate core" 7 ZB1 O1 GLC O1 "Carbohydrate core" 8 ZB1 O2 GLC O2 "Carbohydrate core" 9 ZB1 O3 GLC O3 "Carbohydrate core" 10 ZB1 O4 GLC O4 "Carbohydrate core" 11 ZB1 O5 GLC O5 "Carbohydrate core" 12 ZB1 O6 GLC O6 "Carbohydrate core" 13 ZB1 H1 GLC H1 "Carbohydrate core" 14 ZB1 H2 GLC H2 "Carbohydrate core" 15 ZB1 H3 GLC H3 "Carbohydrate core" 16 ZB1 H4 GLC H4 "Carbohydrate core" 17 ZB1 H5 GLC H5 "Carbohydrate core" 18 ZB1 H61 GLC H61 "Carbohydrate core" 19 ZB1 H62 GLC H62 "Carbohydrate core" 20 ZB1 HO1 GLC HO1 "Carbohydrate core" 21 ZB1 HO2 GLC HO2 "Carbohydrate core" 22 ZB1 HO4 GLC HO4 "Carbohydrate core" 23 ZB1 HO6 GLC HO6 "Carbohydrate core" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZB1 "Create component" 2012-12-18 RCSB ZB1 "Modify atom id" 2013-01-11 RCSB ZB1 "Modify atom id" 2020-05-09 RCSB ZB1 "Initial release" 2020-07-01 RCSB ZB1 "Modify component atom id" 2020-07-17 RCSB ##