data_ZB3 # _chem_comp.id ZB3 _chem_comp.name "2,6-di-O-methyl-alpha-D-glucopyranose" _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C8 H16 O6" _chem_comp.mon_nstd_parent_comp_id GLC _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-12-18 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 208.209 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZB3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2QKH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZB3 C1 C1 C 0 1 N N S -8.903 11.540 32.413 0.758 1.392 -0.005 C1 ZB3 1 ZB3 C2 C2 C 0 1 N N R -9.100 12.135 33.822 1.699 0.242 0.362 C2 ZB3 2 ZB3 C2M C2M C 0 1 N N N -8.700 14.407 34.346 3.839 1.230 0.798 C2M ZB3 3 ZB3 C3 C3 C 0 1 N N S -8.896 11.057 34.891 1.183 -1.053 -0.273 C3 ZB3 4 ZB3 C4 C4 C 0 1 N N S -9.760 9.838 34.576 -0.253 -1.303 0.199 C4 ZB3 5 ZB3 C5 C5 C 0 1 N N R -9.490 9.341 33.149 -1.119 -0.093 -0.161 C5 ZB3 6 ZB3 C6 C6 C 0 1 N N N -10.368 8.149 32.767 -2.541 -0.310 0.361 C6 ZB3 7 ZB3 C6M C6M C 0 1 N N N -12.684 7.753 32.243 -4.734 0.658 0.360 C6M ZB3 8 ZB3 O1 O1 O 0 1 N Y N -7.565 11.108 32.287 0.758 1.574 -1.422 O1 ZB3 9 ZB3 O2 O2 O 0 1 N N N -8.132 13.156 33.994 3.011 0.524 -0.129 O2 ZB3 10 ZB3 O3 O3 O 0 1 N N N -9.207 11.533 36.218 2.014 -2.145 0.124 O3 ZB3 11 ZB3 O4 O4 O 0 1 N N N -9.380 8.831 35.483 -0.771 -2.469 -0.443 O4 ZB3 12 ZB3 O5 O5 O 0 1 N N N -9.729 10.400 32.216 -0.566 1.082 0.436 O5 ZB3 13 ZB3 O6 O6 O 0 1 N N N -11.738 8.516 32.989 -3.377 0.764 -0.075 O6 ZB3 14 ZB3 H1 H1 H 0 1 N N N -9.132 12.314 31.666 1.097 2.308 0.479 H1 ZB3 15 ZB3 HO1 HO1 H 0 1 N Y N -6.980 11.846 32.413 0.181 2.288 -1.727 HO1 ZB3 16 ZB3 H2 H2 H 0 1 N N N -10.119 12.541 33.904 1.732 0.128 1.445 H2 ZB3 17 ZB3 H2M1 H2M1 H 0 0 N N N -7.900 15.153 34.464 4.818 1.405 0.351 H2M1 ZB3 18 ZB3 H2M2 H2M2 H 0 0 N N N -9.390 14.732 33.554 3.376 2.185 1.045 H2M2 ZB3 19 ZB3 H2M3 H2M3 H 0 0 N N N -9.250 14.306 35.293 3.955 0.637 1.706 H2M3 ZB3 20 ZB3 H3 H3 H 0 1 N N N -7.842 10.744 34.859 1.198 -0.959 -1.359 H3 ZB3 21 ZB3 HO3 HO3 H 0 1 N Y N -9.067 10.834 36.846 2.939 -2.053 -0.143 HO3 ZB3 22 ZB3 H4 H4 H 0 1 N N N -10.824 10.098 34.683 -0.260 -1.449 1.280 H4 ZB3 23 ZB3 HO4 HO4 H 0 1 N Y N -9.542 9.126 36.371 -0.267 -3.275 -0.262 HO4 ZB3 24 ZB3 H5 H5 H 0 1 N N N -8.437 9.027 33.088 -1.143 0.026 -1.244 H5 ZB3 25 ZB3 H61 H61 H 0 1 N N N -10.109 7.280 33.390 -2.929 -1.253 -0.024 H61 ZB3 26 ZB3 H62 H62 H 0 1 N N N -10.216 7.898 31.707 -2.527 -0.340 1.450 H62 ZB3 27 ZB3 H6M1 H6M1 H 0 0 N N N -13.701 8.101 32.475 -5.303 1.510 -0.012 H6M1 ZB3 28 ZB3 H6M2 H6M2 H 0 0 N N N -12.490 7.879 31.168 -5.168 -0.265 -0.025 H6M2 ZB3 29 ZB3 H6M3 H6M3 H 0 0 N N N -12.591 6.690 32.511 -4.766 0.647 1.450 H6M3 ZB3 30 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZB3 C1 H1 SING N N 1 ZB3 C1 O1 SING N N 2 ZB3 O1 HO1 SING N N 3 ZB3 C1 O5 SING N N 4 ZB3 C1 C2 SING N N 5 ZB3 C2 H2 SING N N 6 ZB3 C2 O2 SING N N 7 ZB3 O2 C2M SING N N 8 ZB3 C2M H2M1 SING N N 9 ZB3 C2M H2M2 SING N N 10 ZB3 C2M H2M3 SING N N 11 ZB3 C2 C3 SING N N 12 ZB3 C3 H3 SING N N 13 ZB3 C3 O3 SING N N 14 ZB3 O3 HO3 SING N N 15 ZB3 C3 C4 SING N N 16 ZB3 C4 H4 SING N N 17 ZB3 C4 O4 SING N N 18 ZB3 O4 HO4 SING N N 19 ZB3 C4 C5 SING N N 20 ZB3 C5 H5 SING N N 21 ZB3 C5 O5 SING N N 22 ZB3 C5 C6 SING N N 23 ZB3 C6 H61 SING N N 24 ZB3 C6 H62 SING N N 25 ZB3 C6 O6 SING N N 26 ZB3 O6 C6M SING N N 27 ZB3 C6M H6M1 SING N N 28 ZB3 C6M H6M2 SING N N 29 ZB3 C6M H6M3 SING N N 30 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZB3 SMILES ACDLabs 12.01 "O(C)C1C(O)C(O)C(OC1O)COC" ZB3 InChI InChI 1.03 "InChI=1S/C8H16O6/c1-12-3-4-5(9)6(10)7(13-2)8(11)14-4/h4-11H,3H2,1-2H3/t4-,5-,6+,7-,8+/m1/s1" ZB3 InChIKey InChI 1.03 CJUQCEZPMNQPIV-CBQIKETKSA-N ZB3 SMILES_CANONICAL CACTVS 3.370 "COC[C@H]1O[C@H](O)[C@H](OC)[C@@H](O)[C@@H]1O" ZB3 SMILES CACTVS 3.370 "COC[CH]1O[CH](O)[CH](OC)[CH](O)[CH]1O" ZB3 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "COC[C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)OC)O)O" ZB3 SMILES "OpenEye OEToolkits" 1.7.6 "COCC1C(C(C(C(O1)O)OC)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZB3 "SYSTEMATIC NAME" ACDLabs 12.01 "2,6-di-O-methyl-alpha-D-glucopyranose" ZB3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S,3R,4S,5S,6R)-3-methoxy-6-(methoxymethyl)oxane-2,4,5-triol" # _pdbx_chem_comp_related.comp_id ZB3 _pdbx_chem_comp_related.related_comp_id GLC _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 ZB3 C1 GLC C1 "Carbohydrate core" 2 ZB3 C2 GLC C2 "Carbohydrate core" 3 ZB3 C3 GLC C3 "Carbohydrate core" 4 ZB3 C4 GLC C4 "Carbohydrate core" 5 ZB3 C5 GLC C5 "Carbohydrate core" 6 ZB3 C6 GLC C6 "Carbohydrate core" 7 ZB3 O1 GLC O1 "Carbohydrate core" 8 ZB3 O2 GLC O2 "Carbohydrate core" 9 ZB3 O3 GLC O3 "Carbohydrate core" 10 ZB3 O4 GLC O4 "Carbohydrate core" 11 ZB3 O5 GLC O5 "Carbohydrate core" 12 ZB3 O6 GLC O6 "Carbohydrate core" 13 ZB3 H1 GLC H1 "Carbohydrate core" 14 ZB3 H2 GLC H2 "Carbohydrate core" 15 ZB3 H3 GLC H3 "Carbohydrate core" 16 ZB3 H4 GLC H4 "Carbohydrate core" 17 ZB3 H5 GLC H5 "Carbohydrate core" 18 ZB3 H61 GLC H61 "Carbohydrate core" 19 ZB3 H62 GLC H62 "Carbohydrate core" 20 ZB3 HO1 GLC HO1 "Carbohydrate core" 21 ZB3 HO3 GLC HO3 "Carbohydrate core" 22 ZB3 HO4 GLC HO4 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support ZB3 "CARBOHYDRATE ISOMER" D PDB ? ZB3 "CARBOHYDRATE RING" pyranose PDB ? ZB3 "CARBOHYDRATE ANOMER" alpha PDB ? ZB3 "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZB3 "Create component" 2012-12-18 RCSB ZB3 "Modify atom id" 2013-01-11 RCSB ZB3 "Modify atom id" 2020-05-09 RCSB ZB3 "Modify component atom id" 2020-07-17 RCSB ZB3 "Initial release" 2020-07-29 RCSB ##