data_ZCD # _chem_comp.id ZCD _chem_comp.name alpha-D-idopyranose _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H12 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "alpha-D-idose; D-idose; idose" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-12-17 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 180.156 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZCD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3CIU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 ZCD alpha-D-idose PDB ? 2 ZCD D-idose PDB ? 3 ZCD idose PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZCD C1 C1 C 0 1 N N S -10.424 -17.471 -30.715 -0.736 1.094 -0.930 C1 ZCD 1 ZCD C2 C2 C 0 1 N N S -9.560 -17.538 -29.450 -1.739 0.027 -0.482 C2 ZCD 2 ZCD C3 C3 C 0 1 N N R -9.252 -16.172 -28.818 -1.335 -0.494 0.900 C3 ZCD 3 ZCD C4 C4 C 0 1 N N R -9.434 -14.918 -29.705 0.097 -1.033 0.832 C4 ZCD 4 ZCD C5 C5 C 0 1 N N R -9.944 -15.134 -31.153 1.028 0.075 0.334 C5 ZCD 5 ZCD C6 C6 C 0 1 N N N -9.228 -14.263 -32.185 2.451 -0.474 0.206 C6 ZCD 6 ZCD O1 O1 O 0 1 N Y N -11.803 -17.165 -30.434 -0.777 2.197 -0.022 O1 ZCD 7 ZCD O2 O2 O 0 1 N N N -8.335 -18.224 -29.751 -1.737 -1.053 -1.419 O2 ZCD 8 ZCD O3 O3 O 0 1 N N N -10.045 -16.028 -27.627 -1.400 0.572 1.850 O3 ZCD 9 ZCD O4 O4 O 0 1 N N N -8.209 -14.159 -29.699 0.148 -2.141 -0.069 O4 ZCD 10 ZCD O5 O5 O 0 1 N N N -9.861 -16.497 -31.604 0.579 0.535 -0.942 O5 ZCD 11 ZCD O6 O6 O 0 1 N N N -9.324 -12.879 -31.823 3.341 0.588 -0.146 O6 ZCD 12 ZCD H1 H1 H 0 1 N N N -10.376 -18.458 -31.199 -0.994 1.438 -1.932 H1 ZCD 13 ZCD HO1 H1O H 0 1 N Y N -12.159 -17.819 -29.845 -0.166 2.912 -0.244 HO1 ZCD 14 ZCD H2 H2 H 0 1 N N N -10.116 -18.125 -28.704 -2.736 0.463 -0.431 H2 ZCD 15 ZCD HO2 H2O H 0 1 N Y N -8.532 -19.068 -30.141 -1.984 -0.795 -2.317 HO2 ZCD 16 ZCD H3 H3 H 0 1 N N N -8.194 -16.194 -28.518 -2.012 -1.293 1.202 H3 ZCD 17 ZCD HO3 H3O H 0 1 N Y N -9.936 -16.796 -27.079 -2.280 0.961 1.945 HO3 ZCD 18 ZCD H4 H4 H 0 1 N N N -10.198 -14.304 -29.206 0.412 -1.355 1.825 H4 ZCD 19 ZCD HO4 H4O H 0 1 N Y N -8.312 -13.386 -30.242 -0.423 -2.880 0.183 HO4 ZCD 20 ZCD H5 H5 H 0 1 N N N -11.003 -14.836 -31.162 1.020 0.903 1.043 H5 ZCD 21 ZCD H61 H61 H 0 1 N N N -9.692 -14.413 -33.171 2.477 -1.241 -0.567 H61 ZCD 22 ZCD H62 H62 H 0 1 N N N -8.168 -14.553 -32.231 2.761 -0.906 1.158 H62 ZCD 23 ZCD HO6 H6O H 0 1 N Y N -8.875 -12.350 -32.472 4.262 0.312 -0.244 HO6 ZCD 24 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZCD C1 O1 SING N N 1 ZCD O1 HO1 SING N N 2 ZCD C1 H1 SING N N 3 ZCD C1 O5 SING N N 4 ZCD C1 C2 SING N N 5 ZCD C2 H2 SING N N 6 ZCD C2 O2 SING N N 7 ZCD O2 HO2 SING N N 8 ZCD C2 C3 SING N N 9 ZCD C3 H3 SING N N 10 ZCD C3 O3 SING N N 11 ZCD O3 HO3 SING N N 12 ZCD C3 C4 SING N N 13 ZCD C4 H4 SING N N 14 ZCD C4 O4 SING N N 15 ZCD O4 HO4 SING N N 16 ZCD C4 C5 SING N N 17 ZCD C5 H5 SING N N 18 ZCD C5 O5 SING N N 19 ZCD C5 C6 SING N N 20 ZCD C6 O6 SING N N 21 ZCD O6 HO6 SING N N 22 ZCD C6 H61 SING N N 23 ZCD C6 H62 SING N N 24 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZCD SMILES ACDLabs 12.01 "OC1C(O)C(OC(O)C1O)CO" ZCD InChI InChI 1.03 "InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3+,4-,5+,6+/m1/s1" ZCD InChIKey InChI 1.03 WQZGKKKJIJFFOK-RDQKPOQOSA-N ZCD SMILES_CANONICAL CACTVS 3.370 "OC[C@H]1O[C@H](O)[C@@H](O)[C@H](O)[C@H]1O" ZCD SMILES CACTVS 3.370 "OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O" ZCD SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C([C@@H]1[C@@H]([C@H]([C@@H]([C@H](O1)O)O)O)O)O" ZCD SMILES "OpenEye OEToolkits" 1.7.6 "C(C1C(C(C(C(O1)O)O)O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZCD "SYSTEMATIC NAME" ACDLabs 12.01 alpha-D-idopyranose ZCD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S,3S,4R,5R,6R)-6-(hydroxymethyl)oxane-2,3,4,5-tetrol" ZCD "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML 1.0 DIdopa ZCD "COMMON NAME" GMML 1.0 a-D-idopyranose ZCD "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 a-D-Idop ZCD "SNFG CARBOHYDRATE SYMBOL" GMML 1.0 Ido # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support ZCD "CARBOHYDRATE ISOMER" D PDB ? ZCD "CARBOHYDRATE RING" pyranose PDB ? ZCD "CARBOHYDRATE ANOMER" alpha PDB ? ZCD "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZCD "Create component" 2012-12-17 RCSB ZCD "Modify atom id" 2013-01-09 RCSB ZCD "Other modification" 2019-08-12 RCSB ZCD "Other modification" 2019-12-19 RCSB ZCD "Other modification" 2020-06-03 RCSB ZCD "Other modification" 2020-06-10 RCSB ZCD "Other modification" 2020-07-03 RCSB ZCD "Modify atom id" 2020-07-17 RCSB ZCD "Modify component atom id" 2020-07-17 RCSB ZCD "Initial release" 2020-07-29 RCSB ##