data_ZCZ # _chem_comp.id ZCZ _chem_comp.name "4,6-dideoxy-4-{[(2R)-2,4-dihydroxybutanoyl]amino}-2-O-methyl-alpha-D-mannopyranose" _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C11 H21 N O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-12-17 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 279.287 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZCZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1F4Y _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZCZ C1 C1 C 0 1 N N S 39.318 34.942 -6.420 -3.501 0.315 0.674 C1 ZCZ 1 ZCZ C2 C2 C 0 1 N N S 38.727 33.548 -6.637 -2.912 -1.001 0.157 C2 ZCZ 2 ZCZ C2M C2M C 0 1 N N N 36.445 32.764 -6.659 -4.263 -1.654 -1.712 C2M ZCZ 3 ZCZ C3 C3 C 0 1 N N S 38.716 33.361 -8.161 -1.430 -1.071 0.537 C3 ZCZ 4 ZCZ C4 C4 C 0 1 N N S 37.767 34.381 -8.766 -0.709 0.153 -0.036 C4 ZCZ 5 ZCZ C5 C5 C 0 1 N N R 38.182 35.825 -8.421 -1.383 1.424 0.488 C5 ZCZ 6 ZCZ C6 C6 C 0 1 N N N 36.991 36.802 -8.537 -0.707 2.651 -0.126 C6 ZCZ 7 ZCZ C7 C7 C 0 1 N N N 36.331 34.437 -10.604 1.627 0.771 -0.354 C7 ZCZ 8 ZCZ C8 C8 C 0 1 N N R 35.434 34.470 -11.844 3.070 0.752 0.078 C8 ZCZ 9 ZCZ C9 C9 C 0 1 N N N 35.762 35.693 -12.705 3.603 -0.681 0.015 C9 ZCZ 10 ZCZ C10 C10 C 0 1 N N N 36.080 35.442 -14.121 5.028 -0.720 0.570 C10 ZCZ 11 ZCZ O1 O1 O 0 1 N Y N 40.695 34.754 -6.771 -3.417 0.347 2.100 O1 ZCZ 12 ZCZ O2 O2 O 0 1 N N N 37.511 33.358 -5.969 -3.044 -1.058 -1.265 O2 ZCZ 13 ZCZ O3 O3 O 0 1 N N N 38.454 31.986 -8.540 -0.854 -2.262 -0.004 O3 ZCZ 14 ZCZ N4 N4 N 0 1 N N N 37.635 34.285 -10.270 0.695 0.135 0.384 N4 ZCZ 15 ZCZ O5 O5 O 0 1 N N N 38.790 36.042 -7.127 -2.766 1.411 0.127 O5 ZCZ 16 ZCZ O7 O7 O 0 1 N N N 35.730 34.597 -9.545 1.303 1.357 -1.365 O7 ZCZ 17 ZCZ O8 O8 O 0 1 N N N 35.215 33.286 -12.564 3.839 1.584 -0.794 O8 ZCZ 18 ZCZ O10 O10 O 0 1 N N N 37.441 35.863 -14.298 5.526 -2.058 0.512 O10 ZCZ 19 ZCZ H1 H1 H 0 1 N N N 39.261 35.155 -5.342 -4.545 0.389 0.369 H1 ZCZ 20 ZCZ HO1 HO1 H 0 1 N Y N 41.163 35.575 -6.670 -3.773 1.154 2.496 HO1 ZCZ 21 ZCZ H2 H2 H 0 1 N N N 39.457 32.829 -6.237 -3.444 -1.839 0.606 H2 ZCZ 22 ZCZ H2M1 H2M1 H 0 0 N N N 35.572 32.690 -5.993 -4.324 -2.678 -1.342 H2M1 ZCZ 23 ZCZ H2M2 H2M2 H 0 0 N N N 36.187 33.378 -7.534 -5.109 -1.080 -1.333 H2M2 ZCZ 24 ZCZ H2M3 H2M3 H 0 0 N N N 36.739 31.757 -6.991 -4.287 -1.660 -2.802 H2M3 ZCZ 25 ZCZ H3 H3 H 0 1 N N N 39.725 33.617 -8.516 -1.332 -1.079 1.622 H3 ZCZ 26 ZCZ HO3 HO3 H 0 1 N Y N 38.455 31.912 -9.487 -1.267 -3.077 0.310 HO3 ZCZ 27 ZCZ H4 H4 H 0 1 N N N 36.771 34.211 -8.330 -0.764 0.132 -1.124 H4 ZCZ 28 ZCZ H4N1 H4N1 H 0 0 N N N 38.387 34.134 -10.912 0.953 -0.334 1.192 H4N1 ZCZ 29 ZCZ H5 H5 H 0 1 N N N 38.911 36.131 -9.186 -1.291 1.463 1.574 H5 ZCZ 30 ZCZ H61 H61 H 0 1 N N N 37.325 37.819 -8.284 -0.799 2.611 -1.212 H61 ZCZ 31 ZCZ H62 H62 H 0 1 N N N 36.605 36.788 -9.567 -1.187 3.556 0.247 H62 ZCZ 32 ZCZ H63 H63 H 0 1 N N N 36.195 36.494 -7.843 0.348 2.660 0.148 H63 ZCZ 33 ZCZ H8 H8 H 0 1 N N N 34.447 34.719 -11.428 3.149 1.125 1.099 H8 ZCZ 34 ZCZ H8O H8O H 0 1 N N N 34.642 33.464 -13.301 3.814 1.311 -1.721 H8O ZCZ 35 ZCZ H91 H91 H 0 1 N N N 36.630 36.195 -12.253 3.607 -1.022 -1.020 H91 ZCZ 36 ZCZ H92 H92 H 0 1 N N N 34.892 36.365 -12.673 2.963 -1.333 0.610 H92 ZCZ 37 ZCZ H101 H101 H 0 0 N N N 35.411 36.024 -14.772 5.024 -0.379 1.605 H101 ZCZ 38 ZCZ H102 H102 H 0 0 N N N 35.977 34.372 -14.353 5.668 -0.068 -0.025 H102 ZCZ 39 ZCZ H10O H10O H 0 0 N N N 37.701 35.723 -15.201 6.427 -2.158 0.848 H10O ZCZ 40 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZCZ C1 O1 SING N N 1 ZCZ C1 H1 SING N N 2 ZCZ O1 HO1 SING N N 3 ZCZ C1 O5 SING N N 4 ZCZ C1 C2 SING N N 5 ZCZ C2 O2 SING N N 6 ZCZ C2 C3 SING N N 7 ZCZ C2 H2 SING N N 8 ZCZ O2 C2M SING N N 9 ZCZ C2M H2M1 SING N N 10 ZCZ C2M H2M2 SING N N 11 ZCZ C2M H2M3 SING N N 12 ZCZ C3 O3 SING N N 13 ZCZ C3 C4 SING N N 14 ZCZ C3 H3 SING N N 15 ZCZ O3 HO3 SING N N 16 ZCZ C4 N4 SING N N 17 ZCZ C4 C5 SING N N 18 ZCZ C4 H4 SING N N 19 ZCZ C5 O5 SING N N 20 ZCZ C5 H5 SING N N 21 ZCZ C5 C6 SING N N 22 ZCZ C6 H61 SING N N 23 ZCZ C6 H62 SING N N 24 ZCZ C6 H63 SING N N 25 ZCZ N4 C7 SING N N 26 ZCZ N4 H4N1 SING N N 27 ZCZ C7 O7 DOUB N N 28 ZCZ C7 C8 SING N N 29 ZCZ C8 O8 SING N N 30 ZCZ C8 H8 SING N N 31 ZCZ O8 H8O SING N N 32 ZCZ C8 C9 SING N N 33 ZCZ C9 H91 SING N N 34 ZCZ C9 H92 SING N N 35 ZCZ C9 C10 SING N N 36 ZCZ C10 H101 SING N N 37 ZCZ C10 H102 SING N N 38 ZCZ C10 O10 SING N N 39 ZCZ O10 H10O SING N N 40 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZCZ SMILES ACDLabs 12.01 "O=C(NC1C(OC(O)C(OC)C1O)C)C(O)CCO" ZCZ InChI InChI 1.03 "InChI=1S/C11H21NO7/c1-5-7(12-10(16)6(14)3-4-13)8(15)9(18-2)11(17)19-5/h5-9,11,13-15,17H,3-4H2,1-2H3,(H,12,16)/t5-,6-,7-,8+,9+,11+/m1/s1" ZCZ InChIKey InChI 1.03 BYURRTCQJAPYFR-CWJAVHARSA-N ZCZ SMILES_CANONICAL CACTVS 3.370 "CO[C@@H]1[C@@H](O)O[C@H](C)[C@@H](NC(=O)[C@H](O)CCO)[C@@H]1O" ZCZ SMILES CACTVS 3.370 "CO[CH]1[CH](O)O[CH](C)[CH](NC(=O)[CH](O)CCO)[CH]1O" ZCZ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)O)OC)O)NC(=O)[C@@H](CCO)O" ZCZ SMILES "OpenEye OEToolkits" 1.7.6 "CC1C(C(C(C(O1)O)OC)O)NC(=O)C(CCO)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZCZ "SYSTEMATIC NAME" ACDLabs 12.01 "4,6-dideoxy-4-{[(2R)-2,4-dihydroxybutanoyl]amino}-2-O-methyl-alpha-D-mannopyranose" ZCZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2R)-N-[(2R,3S,4S,5S,6S)-5-methoxy-2-methyl-4,6-bis(oxidanyl)oxan-3-yl]-2,4-bis(oxidanyl)butanamide" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support ZCZ "CARBOHYDRATE ISOMER" D PDB ? ZCZ "CARBOHYDRATE RING" pyranose PDB ? ZCZ "CARBOHYDRATE ANOMER" alpha PDB ? ZCZ "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZCZ "Create component" 2012-12-17 RCSB ZCZ "Modify atom id" 2013-01-09 RCSB ZCZ "Modify atom id" 2020-05-09 RCSB ZCZ "Modify component atom id" 2020-07-17 RCSB ZCZ "Initial release" 2020-07-29 RCSB ##