data_ZDP # _chem_comp.id ZDP _chem_comp.name "(2S,6S)-2,6-DIAMINO-2-METHYLHEPTANEDIOIC ACID" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H16 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2006-04-13 _chem_comp.pdbx_modified_date 2012-01-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 204.224 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZDP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2GKE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZDP OAE OAE O 0 1 N N N 21.913 18.911 7.402 4.272 1.398 -0.830 OAE ZDP 1 ZDP CAP CAP C 0 1 N N N 21.882 17.944 6.600 3.912 0.369 -0.047 CAP ZDP 2 ZDP OAG OAG O 0 1 N N N 21.703 18.132 5.371 4.596 0.062 0.900 OAG ZDP 3 ZDP CAS CAS C 0 1 N N S 22.085 16.561 7.119 2.655 -0.405 -0.352 CAS ZDP 4 ZDP NAB NAB N 0 1 N N N 21.611 15.591 6.129 2.718 -1.719 0.302 NAB ZDP 5 ZDP CAK CAK C 0 1 N N N 23.592 16.361 7.386 1.442 0.367 0.171 CAK ZDP 6 ZDP CAJ CAJ C 0 1 N N N 23.940 14.972 7.954 0.159 -0.355 -0.246 CAJ ZDP 7 ZDP CAM CAM C 0 1 N N N 23.530 14.823 9.424 -1.054 0.416 0.277 CAM ZDP 8 ZDP CAT CAT C 0 1 N N S 23.913 13.469 10.045 -2.337 -0.306 -0.140 CAT ZDP 9 ZDP NAC NAC N 0 1 N N N 22.883 12.438 9.708 -2.343 -0.490 -1.597 NAC ZDP 10 ZDP CAQ CAQ C 0 1 N N N 23.956 13.563 11.563 -3.532 0.517 0.268 CAQ ZDP 11 ZDP OAH OAH O 0 1 N N N 24.172 12.498 12.173 -4.694 0.383 -0.389 OAH ZDP 12 ZDP OAF OAF O 0 1 N N N 23.757 14.674 12.158 -3.443 1.296 1.187 OAF ZDP 13 ZDP CAN CAN C 0 1 N N N 25.216 12.943 9.410 -2.399 -1.672 0.547 CAN ZDP 14 ZDP HOAE HOAE H 0 0 N N N 21.785 19.723 6.925 5.086 1.864 -0.595 HOAE ZDP 15 ZDP HAS HAS H 0 1 N N N 21.519 16.412 8.051 2.563 -0.540 -1.429 HAS ZDP 16 ZDP HAB1 1HAB H 0 0 N N N 21.503 16.043 5.244 2.804 -1.621 1.303 HAB1 ZDP 17 ZDP HAB2 2HAB H 0 0 N N N 22.276 14.849 6.045 1.916 -2.282 0.062 HAB2 ZDP 18 ZDP HAK1 1HAK H 0 0 N N N 24.127 16.484 6.433 1.489 0.424 1.259 HAK1 ZDP 19 ZDP HAK2 2HAK H 0 0 N N N 23.889 17.104 8.141 1.444 1.374 -0.246 HAK2 ZDP 20 ZDP HAJ1 1HAJ H 0 0 N N N 23.409 14.210 7.364 0.112 -0.413 -1.333 HAJ1 ZDP 21 ZDP HAJ2 2HAJ H 0 0 N N N 25.031 14.847 7.894 0.157 -1.362 0.172 HAJ2 ZDP 22 ZDP HAM1 1HAM H 0 0 N N N 24.032 15.615 9.999 -1.007 0.474 1.365 HAM1 ZDP 23 ZDP HAM2 2HAM H 0 0 N N N 22.433 14.894 9.460 -1.052 1.423 -0.140 HAM2 ZDP 24 ZDP HAC1 1HAC H 0 0 N N N 22.653 12.501 8.737 -2.303 0.399 -2.074 HAC1 ZDP 25 ZDP HAC2 2HAC H 0 0 N N N 23.246 11.527 9.906 -1.588 -1.092 -1.889 HAC2 ZDP 26 ZDP HOAH HOAH H 0 0 N N N 24.161 12.661 13.109 -5.433 0.932 -0.091 HOAH ZDP 27 ZDP HAN1 1HAN H 0 0 N N N 25.072 12.818 8.327 -2.394 -1.535 1.628 HAN1 ZDP 28 ZDP HAN2 2HAN H 0 0 N N N 26.028 13.662 9.591 -3.313 -2.186 0.250 HAN2 ZDP 29 ZDP HAN3 3HAN H 0 0 N N N 25.477 11.974 9.859 -1.535 -2.267 0.252 HAN3 ZDP 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZDP OAE CAP SING N N 1 ZDP OAE HOAE SING N N 2 ZDP CAP OAG DOUB N N 3 ZDP CAP CAS SING N N 4 ZDP CAS NAB SING N N 5 ZDP CAS CAK SING N N 6 ZDP CAS HAS SING N N 7 ZDP NAB HAB1 SING N N 8 ZDP NAB HAB2 SING N N 9 ZDP CAK CAJ SING N N 10 ZDP CAK HAK1 SING N N 11 ZDP CAK HAK2 SING N N 12 ZDP CAJ CAM SING N N 13 ZDP CAJ HAJ1 SING N N 14 ZDP CAJ HAJ2 SING N N 15 ZDP CAM CAT SING N N 16 ZDP CAM HAM1 SING N N 17 ZDP CAM HAM2 SING N N 18 ZDP CAT NAC SING N N 19 ZDP CAT CAQ SING N N 20 ZDP CAT CAN SING N N 21 ZDP NAC HAC1 SING N N 22 ZDP NAC HAC2 SING N N 23 ZDP CAQ OAH SING N N 24 ZDP CAQ OAF DOUB N N 25 ZDP OAH HOAH SING N N 26 ZDP CAN HAN1 SING N N 27 ZDP CAN HAN2 SING N N 28 ZDP CAN HAN3 SING N N 29 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZDP SMILES ACDLabs 10.04 "O=C(O)C(N)(CCCC(N)C(=O)O)C" ZDP InChI InChI 1.03 "InChI=1S/C8H16N2O4/c1-8(10,7(13)14)4-2-3-5(9)6(11)12/h5H,2-4,9-10H2,1H3,(H,11,12)(H,13,14)/t5-,8-/m0/s1" ZDP InChIKey InChI 1.03 TVZGBXIJPFGQBJ-XNCJUZBTSA-N ZDP SMILES_CANONICAL CACTVS 3.385 "C[C@](N)(CCC[C@H](N)C(O)=O)C(O)=O" ZDP SMILES CACTVS 3.385 "C[C](N)(CCC[CH](N)C(O)=O)C(O)=O" ZDP SMILES_CANONICAL "OpenEye OEToolkits" 1.7.5 "C[C@](CCC[C@@H](C(=O)O)N)(C(=O)O)N" ZDP SMILES "OpenEye OEToolkits" 1.7.5 "CC(CCCC(C(=O)O)N)(C(=O)O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZDP "SYSTEMATIC NAME" ACDLabs 10.04 "(2S,6S)-2,6-diamino-2-methylheptanedioic acid" ZDP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S,6S)-2,6-diamino-2-methyl-heptanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZDP "Create component" 2006-04-13 EBI ZDP "Modify descriptor" 2011-06-04 RCSB ZDP "Modify descriptor" 2012-01-05 RCSB ZDP "Modify coordinates" 2012-01-05 RCSB #