data_ZE0 # _chem_comp.id ZE0 _chem_comp.name "(3'E)-3',4'-didehydro-1,2-dihydro-psi,psi-caroten-1-ol" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C40 H56 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-12-18 _chem_comp.pdbx_modified_date 2022-09-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 552.872 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZE0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1KZU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZE0 O1 O1 O 0 1 N N N 6.924 26.747 48.551 14.982 2.914 1.053 O1 ZE0 1 ZE0 C1 C1 C 0 1 N N N 6.772 27.825 47.621 15.899 1.861 0.751 C1 ZE0 2 ZE0 C2 C2 C 0 1 N N N 7.527 29.016 48.132 17.229 2.459 0.287 C2 ZE0 3 ZE0 C3 C3 C 0 1 N N N 5.311 28.195 47.508 16.131 1.012 2.003 C3 ZE0 4 ZE0 C4 C4 C 0 1 N N N 7.365 27.414 46.193 15.320 0.983 -0.360 C4 ZE0 5 ZE0 C5 C5 C 0 1 N N N 6.479 26.440 45.436 13.990 0.385 0.103 C5 ZE0 6 ZE0 C6 C6 C 0 1 N N N 7.264 25.615 44.402 13.410 -0.492 -1.008 C6 ZE0 7 ZE0 C7 C7 C 0 1 N N N 7.477 26.335 43.086 12.101 -1.082 -0.552 C7 ZE0 8 ZE0 C8 C8 C 0 1 N N N 8.821 26.943 42.824 12.088 -2.352 0.260 C8 ZE0 9 ZE0 C9 C9 C 0 1 N N N 6.588 26.099 42.030 10.950 -0.478 -0.866 C9 ZE0 10 ZE0 C10 C10 C 0 1 N N N 6.962 26.234 40.687 9.719 -1.032 -0.437 C10 ZE0 11 ZE0 C11 C11 C 0 1 N N N 6.075 25.820 39.684 8.549 -0.418 -0.757 C11 ZE0 12 ZE0 C12 C12 C 0 1 N N N 6.329 26.005 38.316 7.327 -0.968 -0.331 C12 ZE0 13 ZE0 C13 C13 C 0 1 N N N 7.741 25.913 37.824 7.314 -2.238 0.481 C13 ZE0 14 ZE0 C14 C14 C 0 1 N N N 5.279 25.821 37.411 6.152 -0.351 -0.652 C14 ZE0 15 ZE0 C15 C15 C 0 1 N N N 5.419 25.997 36.031 4.935 -0.899 -0.228 C15 ZE0 16 ZE0 C16 C16 C 0 1 N N N 4.271 26.195 35.271 3.749 -0.276 -0.552 C16 ZE0 17 ZE0 C17 C17 C 0 1 N N N 4.193 25.926 33.903 2.533 -0.823 -0.128 C17 ZE0 18 ZE0 C18 C18 C 0 1 N N N 5.424 26.063 33.042 2.520 -2.093 0.683 C18 ZE0 19 ZE0 C19 C19 C 0 1 N N N 2.923 25.917 33.319 1.346 -0.200 -0.452 C19 ZE0 20 ZE0 C20 C20 C 0 1 N N N 2.691 25.812 31.949 0.131 -0.747 -0.029 C20 ZE0 21 ZE0 C21 C21 C 0 1 N N N 1.362 25.722 31.501 -1.057 -0.123 -0.354 C21 ZE0 22 ZE0 C22 C22 C 0 1 N N N 1.038 25.673 30.149 -2.271 -0.670 0.070 C22 ZE0 23 ZE0 C23 C23 C 0 1 N N N -0.227 25.256 29.737 -3.459 -0.046 -0.255 C23 ZE0 24 ZE0 C24 C24 C 0 1 N N N -1.327 25.110 30.745 -3.446 1.224 -1.066 C24 ZE0 25 ZE0 C25 C25 C 0 1 N N N -0.501 25.073 28.376 -4.674 -0.592 0.168 C25 ZE0 26 ZE0 C26 C26 C 0 1 N N N -1.582 24.286 27.942 -5.861 0.031 -0.157 C26 ZE0 27 ZE0 C27 C27 C 0 1 N N N -1.832 24.152 26.570 -7.076 -0.516 0.267 C27 ZE0 28 ZE0 C28 C28 C 0 1 N N N -2.878 23.370 26.057 -8.263 0.107 -0.058 C28 ZE0 29 ZE0 C29 C29 C 0 1 N N N -4.016 22.939 26.955 -8.250 1.377 -0.869 C29 ZE0 30 ZE0 C30 C30 C 0 1 N N N -3.033 23.281 24.671 -9.479 -0.440 0.366 C30 ZE0 31 ZE0 C31 C31 C 0 1 N N N -3.851 22.321 24.072 -10.665 0.183 0.042 C31 ZE0 32 ZE0 C32 C32 C 0 1 N N N -3.701 22.064 22.716 -11.882 -0.365 0.466 C32 ZE0 33 ZE0 C33 C33 C 0 1 N N N -4.624 21.323 21.991 -13.058 0.252 0.145 C33 ZE0 34 ZE0 C34 C34 C 0 1 N N N -5.817 20.714 22.648 -13.045 1.522 -0.666 C34 ZE0 35 ZE0 C35 C35 C 0 1 N N N -4.572 21.356 20.493 -14.279 -0.298 0.571 C35 ZE0 36 ZE0 C36 C36 C 0 1 N N N -3.746 20.218 19.944 -15.449 0.316 0.251 C36 ZE0 37 ZE0 C37 C37 C 0 1 N N N -3.850 20.197 18.447 -16.681 -0.238 0.680 C37 ZE0 38 ZE0 C38 C38 C 0 1 N N N -3.282 19.174 17.726 -17.831 0.366 0.366 C38 ZE0 39 ZE0 C39 C39 C 0 1 N N N -3.008 19.367 16.280 -17.818 1.636 -0.445 C39 ZE0 40 ZE0 C40 C40 C 0 1 N N N -2.684 18.004 18.432 -19.141 -0.223 0.822 C40 ZE0 41 ZE0 H1O H1O H 0 1 N Y N 6.449 25.987 48.236 14.788 3.494 0.304 H1O ZE0 42 ZE0 H21 H21 H 0 1 N N N 7.417 29.851 47.425 17.642 3.084 1.079 H21 ZE0 43 ZE0 H22 H22 H 0 1 N N N 7.126 29.311 49.113 17.928 1.655 0.057 H22 ZE0 44 ZE0 H23 H23 H 0 1 N N N 8.592 28.759 48.233 17.064 3.064 -0.604 H23 ZE0 45 ZE0 H31 H31 H 0 1 N N N 5.196 29.023 46.793 15.183 0.586 2.333 H31 ZE0 46 ZE0 H32 H32 H 0 1 N N N 4.739 27.324 47.155 16.830 0.208 1.772 H32 ZE0 47 ZE0 H33 H33 H 0 1 N N N 4.934 28.507 48.493 16.543 1.637 2.795 H33 ZE0 48 ZE0 H41 H41 H 0 1 N N N 7.481 28.325 45.587 15.155 1.588 -1.252 H41 ZE0 49 ZE0 H42 H42 H 0 1 N N N 8.349 26.947 46.344 16.019 0.180 -0.591 H42 ZE0 50 ZE0 H51 H51 H 0 1 N N N 6.014 25.752 46.157 14.155 -0.220 0.995 H51 ZE0 51 ZE0 H52 H52 H 0 1 N N N 5.695 27.008 44.913 13.290 1.189 0.334 H52 ZE0 52 ZE0 H61 H61 H 0 1 N N N 8.248 25.370 44.828 13.245 0.112 -1.900 H61 ZE0 53 ZE0 H62 H62 H 0 1 N N N 6.709 24.686 44.204 14.110 -1.296 -1.238 H62 ZE0 54 ZE0 H81 H81 H 0 1 N N N 8.819 27.426 41.836 12.138 -2.106 1.320 H81 ZE0 55 ZE0 H82 H82 H 0 1 N N N 9.041 27.693 43.598 11.169 -2.903 0.058 H82 ZE0 56 ZE0 H83 H83 H 0 1 N N N 9.590 26.157 42.846 12.947 -2.965 -0.012 H83 ZE0 57 ZE0 H91 H91 H 0 1 N N N 5.576 25.802 42.260 10.960 0.432 -1.447 H91 ZE0 58 ZE0 H101 H101 H 0 0 N N N 7.923 26.652 40.427 9.709 -1.942 0.145 H101 ZE0 59 ZE0 H111 H111 H 0 0 N N N 5.155 25.337 39.977 8.558 0.492 -1.338 H111 ZE0 60 ZE0 H131 H131 H 0 0 N N N 7.763 26.082 36.737 7.365 -1.992 1.541 H131 ZE0 61 ZE0 H132 H132 H 0 0 N N N 8.354 26.676 38.326 6.396 -2.789 0.278 H132 ZE0 62 ZE0 H133 H133 H 0 0 N N N 8.143 24.914 38.048 8.174 -2.851 0.209 H133 ZE0 63 ZE0 H141 H141 H 0 0 N N N 4.313 25.529 37.797 6.161 0.559 -1.233 H141 ZE0 64 ZE0 H151 H151 H 0 0 N N N 6.394 25.980 35.567 4.925 -1.809 0.354 H151 ZE0 65 ZE0 H161 H161 H 0 0 N N N 3.391 26.578 35.766 3.758 0.634 -1.133 H161 ZE0 66 ZE0 H181 H181 H 0 0 N N N 5.173 25.812 32.001 2.570 -1.847 1.744 H181 ZE0 67 ZE0 H182 H182 H 0 0 N N N 5.793 27.098 33.091 1.602 -2.644 0.481 H182 ZE0 68 ZE0 H183 H183 H 0 0 N N N 6.204 25.378 33.406 3.379 -2.707 0.412 H183 ZE0 69 ZE0 H191 H191 H 0 0 N N N 2.066 25.997 33.972 1.355 0.710 -1.034 H191 ZE0 70 ZE0 H201 H201 H 0 0 N N N 3.513 25.800 31.248 0.122 -1.657 0.552 H201 ZE0 71 ZE0 H211 H211 H 0 0 N N N 0.566 25.690 32.230 -1.048 0.787 -0.935 H211 ZE0 72 ZE0 H221 H221 H 0 0 N N N 1.773 25.961 29.412 -2.280 -1.580 0.651 H221 ZE0 73 ZE0 H241 H241 H 0 0 N N N -2.245 24.775 30.241 -3.497 0.978 -2.127 H241 ZE0 74 ZE0 H242 H242 H 0 0 N N N -1.034 24.369 31.503 -4.305 1.837 -0.795 H242 ZE0 75 ZE0 H243 H243 H 0 0 N N N -1.509 26.080 31.232 -2.528 1.775 -0.864 H243 ZE0 76 ZE0 H251 H251 H 0 0 N N N 0.133 25.548 27.642 -4.683 -1.503 0.750 H251 ZE0 77 ZE0 H261 H261 H 0 0 N N N -2.215 23.788 28.661 -5.852 0.941 -0.738 H261 ZE0 78 ZE0 H271 H271 H 0 0 N N N -1.190 24.674 25.876 -7.085 -1.426 0.848 H271 ZE0 79 ZE0 H291 H291 H 0 0 N N N -4.733 22.338 26.376 -8.301 1.131 -1.930 H291 ZE0 80 ZE0 H292 H292 H 0 0 N N N -3.619 22.337 27.786 -9.109 1.991 -0.597 H292 ZE0 81 ZE0 H293 H293 H 0 0 N N N -4.524 23.829 27.356 -7.332 1.928 -0.667 H293 ZE0 82 ZE0 H301 H301 H 0 0 N N N -2.502 23.979 24.041 -9.488 -1.350 0.948 H301 ZE0 83 ZE0 H311 H311 H 0 0 N N N -4.588 21.787 24.654 -10.656 1.093 -0.539 H311 ZE0 84 ZE0 H321 H321 H 0 0 N N N -2.833 22.455 22.206 -11.892 -1.275 1.048 H321 ZE0 85 ZE0 H341 H341 H 0 0 N N N -6.413 20.174 21.898 -13.095 1.276 -1.727 H341 ZE0 86 ZE0 H342 H342 H 0 0 N N N -5.487 20.013 23.429 -13.904 2.135 -0.394 H342 ZE0 87 ZE0 H343 H343 H 0 0 N N N -6.430 21.507 23.102 -12.126 2.073 -0.464 H343 ZE0 88 ZE0 H351 H351 H 0 0 N N N -5.063 22.100 19.884 -14.288 -1.208 1.152 H351 ZE0 89 ZE0 H361 H361 H 0 0 N N N -3.168 19.525 20.538 -15.440 1.227 -0.330 H361 ZE0 90 ZE0 H371 H371 H 0 0 N N N -4.374 20.990 17.934 -16.690 -1.148 1.262 H371 ZE0 91 ZE0 H391 H391 H 0 0 N N N -2.556 18.453 15.867 -17.868 1.390 -1.506 H391 ZE0 92 ZE0 H392 H392 H 0 0 N N N -3.950 19.580 15.754 -18.677 2.249 -0.174 H392 ZE0 93 ZE0 H393 H393 H 0 0 N N N -2.315 20.211 16.148 -16.900 2.187 -0.243 H393 ZE0 94 ZE0 H401 H401 H 0 0 N N N -2.282 17.295 17.693 -18.951 -1.133 1.392 H401 ZE0 95 ZE0 H402 H402 H 0 0 N N N -1.872 18.348 19.089 -19.663 0.497 1.452 H402 ZE0 96 ZE0 H403 H403 H 0 0 N N N -3.457 17.506 19.035 -19.756 -0.460 -0.046 H403 ZE0 97 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZE0 O1 C1 SING N N 1 ZE0 C1 C2 SING N N 2 ZE0 C1 C3 SING N N 3 ZE0 C1 C4 SING N N 4 ZE0 C2 H21 SING N N 5 ZE0 C2 H22 SING N N 6 ZE0 C2 H23 SING N N 7 ZE0 C3 H31 SING N N 8 ZE0 C3 H32 SING N N 9 ZE0 C3 H33 SING N N 10 ZE0 C4 C5 SING N N 11 ZE0 C4 H41 SING N N 12 ZE0 C4 H42 SING N N 13 ZE0 C5 C6 SING N N 14 ZE0 C5 H51 SING N N 15 ZE0 C5 H52 SING N N 16 ZE0 C6 C7 SING N N 17 ZE0 C6 H61 SING N N 18 ZE0 C6 H62 SING N N 19 ZE0 C7 C8 SING N N 20 ZE0 C7 C9 DOUB N E 21 ZE0 C8 H81 SING N N 22 ZE0 C8 H82 SING N N 23 ZE0 C8 H83 SING N N 24 ZE0 C9 C10 SING N N 25 ZE0 C9 H91 SING N N 26 ZE0 C10 C11 DOUB N E 27 ZE0 C10 H101 SING N N 28 ZE0 C11 C12 SING N N 29 ZE0 C11 H111 SING N N 30 ZE0 C12 C13 SING N N 31 ZE0 C12 C14 DOUB N E 32 ZE0 C13 H131 SING N N 33 ZE0 C13 H132 SING N N 34 ZE0 C13 H133 SING N N 35 ZE0 C14 C15 SING N N 36 ZE0 C14 H141 SING N N 37 ZE0 C15 C16 DOUB N E 38 ZE0 C15 H151 SING N N 39 ZE0 C16 C17 SING N N 40 ZE0 C16 H161 SING N N 41 ZE0 C17 C18 SING N N 42 ZE0 C17 C19 DOUB N E 43 ZE0 C18 H181 SING N N 44 ZE0 C18 H182 SING N N 45 ZE0 C18 H183 SING N N 46 ZE0 C19 C20 SING N N 47 ZE0 C19 H191 SING N N 48 ZE0 C20 C21 DOUB N E 49 ZE0 C20 H201 SING N N 50 ZE0 C21 C22 SING N N 51 ZE0 C21 H211 SING N N 52 ZE0 C22 C23 DOUB N E 53 ZE0 C22 H221 SING N N 54 ZE0 C23 C24 SING N N 55 ZE0 C23 C25 SING N N 56 ZE0 C24 H241 SING N N 57 ZE0 C24 H242 SING N N 58 ZE0 C24 H243 SING N N 59 ZE0 C25 C26 DOUB N E 60 ZE0 C25 H251 SING N N 61 ZE0 C26 C27 SING N N 62 ZE0 C26 H261 SING N N 63 ZE0 C27 C28 DOUB N E 64 ZE0 C27 H271 SING N N 65 ZE0 C28 C29 SING N N 66 ZE0 C28 C30 SING N N 67 ZE0 C29 H291 SING N N 68 ZE0 C29 H292 SING N N 69 ZE0 C29 H293 SING N N 70 ZE0 C30 C31 DOUB N E 71 ZE0 C30 H301 SING N N 72 ZE0 C31 C32 SING N N 73 ZE0 C31 H311 SING N N 74 ZE0 C32 C33 DOUB N E 75 ZE0 C32 H321 SING N N 76 ZE0 C33 C34 SING N N 77 ZE0 C33 C35 SING N N 78 ZE0 C34 H341 SING N N 79 ZE0 C34 H342 SING N N 80 ZE0 C34 H343 SING N N 81 ZE0 C35 C36 DOUB N E 82 ZE0 C35 H351 SING N N 83 ZE0 C36 C37 SING N N 84 ZE0 C36 H361 SING N N 85 ZE0 C37 C38 DOUB N N 86 ZE0 C37 H371 SING N N 87 ZE0 C38 C39 SING N N 88 ZE0 C38 C40 SING N N 89 ZE0 C39 H391 SING N N 90 ZE0 C39 H392 SING N N 91 ZE0 C39 H393 SING N N 92 ZE0 C40 H401 SING N N 93 ZE0 C40 H402 SING N N 94 ZE0 C40 H403 SING N N 95 ZE0 H1O O1 SING N N 96 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZE0 SMILES ACDLabs 12.01 "OC(C)(C)CCCC(=C\C=C\C(=C\C=C\C(=C\C=C\C=C(\C=C\C=C(\C=C\C=C(\C=C\C=C(\C)C)C)C)C)C)C)\C" ZE0 InChI InChI 1.03 "InChI=1S/C40H56O/c1-33(2)19-13-22-36(5)25-16-28-37(6)26-14-23-34(3)20-11-12-21-35(4)24-15-27-38(7)29-17-30-39(8)31-18-32-40(9,10)41/h11-17,19-30,41H,18,31-32H2,1-10H3/b12-11+,22-13+,23-14+,24-15+,28-16+,29-17+,34-20+,35-21+,36-25+,37-26+,38-27+,39-30+" ZE0 InChIKey InChI 1.03 SBVLKWMQRFTYPE-WRNKADOOSA-N ZE0 SMILES_CANONICAL CACTVS 3.370 "CC(C)=C/C=C/C(C)=C/C=C/C(C)=C/C=C/C(C)=C/C=C/C=C(C)/C=C/C=C(C)/C=C/C=C(C)/CCCC(C)(C)O" ZE0 SMILES CACTVS 3.370 "CC(C)=CC=CC(C)=CC=CC(C)=CC=CC(C)=CC=CC=C(C)C=CC=C(C)C=CC=C(C)CCCC(C)(C)O" ZE0 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(=C/C=C/C(=C/C=C/C(=C/C=C/C(=C/C=C/C=C(\C)/C=C/C=C(\C)/C=C/C=C(\C)/CCCC(C)(C)O)/C)/C)/C)C" ZE0 SMILES "OpenEye OEToolkits" 1.7.6 "CC(=CC=CC(=CC=CC(=CC=CC(=CC=CC=C(C)C=CC=C(C)C=CC=C(C)CCCC(C)(C)O)C)C)C)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZE0 "SYSTEMATIC NAME" ACDLabs 12.01 "(3'E)-3',4'-didehydro-1,2-dihydro-psi,psi-caroten-1-ol" ZE0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(6E,8E,10E,12E,14E,16E,18E,20E,22E,24E,26E,28E)-2,6,10,14,19,23,27,31-octamethyldotriaconta-6,8,10,12,14,16,18,20,22,24,26,28,30-tridecaen-2-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZE0 "Create component" 2012-12-18 RCSB ZE0 "Initial release" 2022-10-05 RCSB #