data_ZIA # _chem_comp.id ZIA _chem_comp.name "[(2R)-5-oxopyrrolidin-2-yl]methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H22 N2 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-03-13 _chem_comp.pdbx_modified_date 2023-05-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 318.323 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZIA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8GFI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZIA C10 C1 C 0 1 N N R -33.610 -62.515 -11.131 -3.062 0.610 -0.644 C10 ZIA 1 ZIA C9 C2 C 0 1 N N N -34.182 -63.038 -12.444 -1.723 -0.041 -0.997 C9 ZIA 2 ZIA C4 C3 C 0 1 N N R -32.078 -63.366 -16.910 3.068 0.331 -0.081 C4 ZIA 3 ZIA C2 C4 C 0 1 N N N -29.676 -63.178 -14.252 0.783 3.207 0.105 C2 ZIA 4 ZIA N1 N1 N 0 1 N N N -30.730 -62.710 -14.945 1.652 2.304 -0.390 N1 ZIA 5 ZIA C6 C5 C 0 1 N N R -34.540 -63.827 -16.529 1.957 -1.893 -0.296 C6 ZIA 6 ZIA C5 C6 C 0 1 N N S -33.303 -64.187 -17.370 3.065 -1.116 0.420 C5 ZIA 7 ZIA C8 C7 C 0 1 N N R -33.194 -63.198 -14.641 0.629 0.087 -0.552 C8 ZIA 8 ZIA C11 C8 C 0 1 N N N -32.340 -63.252 -10.668 -4.197 -0.008 -1.490 C11 ZIA 9 ZIA C1 C9 C 0 1 N N N -28.707 -62.173 -13.691 0.750 4.607 -0.454 C1 ZIA 10 ZIA O1 O1 O 0 1 N N N -29.506 -64.383 -14.106 0.027 2.894 1.000 O1 ZIA 11 ZIA C3 C10 C 0 1 N N R -31.869 -63.509 -15.391 1.683 0.944 0.153 C3 ZIA 12 ZIA O2 O2 O 0 1 N N N -30.898 -63.669 -17.665 4.050 1.084 0.632 O2 ZIA 13 ZIA O3 O3 O 0 1 N N N -33.658 -63.931 -18.735 4.329 -1.721 0.141 O3 ZIA 14 ZIA C7 C11 C 0 1 N N N -35.750 -64.687 -16.824 1.908 -3.325 0.243 C7 ZIA 15 ZIA O4 O4 O 0 1 N N N -36.875 -64.220 -16.102 0.954 -4.082 -0.503 O4 ZIA 16 ZIA O5 O5 O 0 1 N N N -34.276 -63.993 -15.119 0.701 -1.253 -0.062 O5 ZIA 17 ZIA O6 O6 O 0 1 N N N -33.090 -63.513 -13.274 -0.671 0.621 -0.292 O6 ZIA 18 ZIA C12 C12 C 0 1 N N N -31.201 -62.268 -10.949 -4.719 -1.122 -0.553 C12 ZIA 19 ZIA C13 C13 C 0 1 N N N -31.883 -60.924 -10.919 -4.339 -0.648 0.833 C13 ZIA 20 ZIA O7 O7 O 0 1 N N N -31.365 -59.835 -10.632 -4.801 -1.082 1.867 O7 ZIA 21 ZIA N2 N2 N 0 1 N N N -33.172 -61.117 -11.240 -3.415 0.324 0.752 N2 ZIA 22 ZIA H1 H1 H 0 1 N N N -34.376 -62.604 -10.347 -3.012 1.686 -0.808 H1 ZIA 23 ZIA H2 H2 H 0 1 N N N -34.716 -62.228 -12.963 -1.745 -1.094 -0.714 H2 ZIA 24 ZIA H3 H3 H 0 1 N N N -34.878 -63.865 -12.241 -1.550 0.043 -2.070 H3 ZIA 25 ZIA H4 H4 H 0 1 N N N -32.328 -62.310 -17.091 3.298 0.348 -1.147 H4 ZIA 26 ZIA H5 H5 H 0 1 N N N -30.734 -61.736 -15.173 2.256 2.555 -1.107 H5 ZIA 27 ZIA H6 H6 H 0 1 N N N -34.800 -62.777 -16.732 2.161 -1.915 -1.366 H6 ZIA 28 ZIA H7 H7 H 0 1 N N N -33.081 -65.255 -17.231 2.883 -1.129 1.495 H7 ZIA 29 ZIA H8 H8 H 0 1 N N N -33.423 -62.130 -14.771 0.815 0.092 -1.626 H8 ZIA 30 ZIA H9 H9 H 0 1 N N N -32.396 -63.486 -9.595 -4.975 0.726 -1.695 H9 ZIA 31 ZIA H10 H10 H 0 1 N N N -32.200 -64.182 -11.239 -3.807 -0.429 -2.417 H10 ZIA 32 ZIA H11 H11 H 0 1 N N N -27.892 -62.699 -13.172 1.442 5.237 0.105 H11 ZIA 33 ZIA H12 H12 H 0 1 N N N -28.290 -61.569 -14.510 1.044 4.586 -1.503 H12 ZIA 34 ZIA H13 H13 H 0 1 N N N -29.230 -61.516 -12.981 -0.259 5.009 -0.367 H13 ZIA 35 ZIA H14 H14 H 0 1 N N N -31.636 -64.567 -15.198 1.474 0.974 1.222 H14 ZIA 36 ZIA H15 H15 H 0 1 N N N -30.174 -63.142 -17.347 4.952 0.752 0.529 H15 ZIA 37 ZIA H16 H16 H 0 1 N N N -34.413 -64.457 -18.970 4.398 -2.640 0.432 H16 ZIA 38 ZIA H17 H17 H 0 1 N N N -35.969 -64.648 -17.901 2.892 -3.783 0.146 H17 ZIA 39 ZIA H18 H18 H 0 1 N N N -35.537 -65.726 -16.531 1.618 -3.308 1.293 H18 ZIA 40 ZIA H19 H19 H 0 1 N N N -37.626 -64.768 -16.296 0.870 -5.002 -0.216 H19 ZIA 41 ZIA H20 H20 H 0 1 N N N -30.751 -62.459 -11.934 -5.801 -1.217 -0.640 H20 ZIA 42 ZIA H21 H21 H 0 1 N N N -30.425 -62.333 -10.172 -4.232 -2.070 -0.778 H21 ZIA 43 ZIA H22 H22 H 0 1 N N N -33.779 -60.376 -11.527 -3.030 0.779 1.518 H22 ZIA 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZIA O3 C5 SING N N 1 ZIA O2 C4 SING N N 2 ZIA C5 C4 SING N N 3 ZIA C5 C6 SING N N 4 ZIA C4 C3 SING N N 5 ZIA C7 C6 SING N N 6 ZIA C7 O4 SING N N 7 ZIA C6 O5 SING N N 8 ZIA C3 N1 SING N N 9 ZIA C3 C8 SING N N 10 ZIA O5 C8 SING N N 11 ZIA N1 C2 SING N N 12 ZIA C8 O6 SING N N 13 ZIA C2 O1 DOUB N N 14 ZIA C2 C1 SING N N 15 ZIA O6 C9 SING N N 16 ZIA C9 C10 SING N N 17 ZIA N2 C10 SING N N 18 ZIA N2 C13 SING N N 19 ZIA C10 C11 SING N N 20 ZIA C12 C13 SING N N 21 ZIA C12 C11 SING N N 22 ZIA C13 O7 DOUB N N 23 ZIA C10 H1 SING N N 24 ZIA C9 H2 SING N N 25 ZIA C9 H3 SING N N 26 ZIA C4 H4 SING N N 27 ZIA N1 H5 SING N N 28 ZIA C6 H6 SING N N 29 ZIA C5 H7 SING N N 30 ZIA C8 H8 SING N N 31 ZIA C11 H9 SING N N 32 ZIA C11 H10 SING N N 33 ZIA C1 H11 SING N N 34 ZIA C1 H12 SING N N 35 ZIA C1 H13 SING N N 36 ZIA C3 H14 SING N N 37 ZIA O2 H15 SING N N 38 ZIA O3 H16 SING N N 39 ZIA C7 H17 SING N N 40 ZIA C7 H18 SING N N 41 ZIA O4 H19 SING N N 42 ZIA C12 H20 SING N N 43 ZIA C12 H21 SING N N 44 ZIA N2 H22 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZIA SMILES ACDLabs 12.01 "CC(=O)NC1C(O)C(O)C(CO)OC1OCC1CCC(=O)N1" ZIA InChI InChI 1.06 "InChI=1S/C13H22N2O7/c1-6(17)14-10-12(20)11(19)8(4-16)22-13(10)21-5-7-2-3-9(18)15-7/h7-8,10-13,16,19-20H,2-5H2,1H3,(H,14,17)(H,15,18)/t7-,8-,10-,11-,12-,13-/m1/s1" ZIA InChIKey InChI 1.06 KCXADKXCRNBSFF-IOJHDDLYSA-N ZIA SMILES_CANONICAL CACTVS 3.385 "CC(=O)N[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@H]1OC[C@H]2CCC(=O)N2" ZIA SMILES CACTVS 3.385 "CC(=O)N[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1OC[CH]2CCC(=O)N2" ZIA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1OC[C@H]2CCC(=O)N2)CO)O)O" ZIA SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)NC1C(C(C(OC1OCC2CCC(=O)N2)CO)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZIA "SYSTEMATIC NAME" ACDLabs 12.01 "[(2R)-5-oxopyrrolidin-2-yl]methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside" ZIA "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(2~{R},3~{R},4~{R},5~{S},6~{R})-6-(hydroxymethyl)-4,5-bis(oxidanyl)-2-[[(2~{R})-5-oxidanylidenepyrrolidin-2-yl]methoxy]oxan-3-yl]ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZIA "Create component" 2023-03-13 RCSB ZIA "Initial release" 2023-05-24 RCSB #