data_ZK9 # _chem_comp.id ZK9 _chem_comp.name "[3-AMINOMETHYLPHENYL-OXY-]-[BENZAMIDIN-3-YLOXY]-3,5-DIFLUORO-4-METHYL-PYRIDINE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H20 F2 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ZK-806299 _chem_comp.pdbx_formal_charge 2 _chem_comp.pdbx_initial_date 1999-08-24 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 386.395 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZK9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1CU7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZK9 C1 C1 C 0 1 Y N N 10.422 18.894 20.729 4.285 0.044 1.478 C1 ZK9 1 ZK9 C2 C2 C 0 1 Y N N 9.363 19.380 19.928 4.395 -0.622 0.257 C2 ZK9 2 ZK9 C3 C3 C 0 1 Y N N 8.831 20.662 20.196 3.356 -0.548 -0.669 C3 ZK9 3 ZK9 C4 C4 C 0 1 Y N N 9.343 21.438 21.265 2.225 0.196 -0.376 C4 ZK9 4 ZK9 C5 C5 C 0 1 Y N N 10.368 20.911 22.084 2.123 0.856 0.841 C5 ZK9 5 ZK9 C6 C6 C 0 1 Y N N 10.920 19.654 21.799 3.151 0.778 1.763 C6 ZK9 6 ZK9 O7 O7 O 0 1 N N N 8.723 22.598 21.628 1.212 0.276 -1.278 O7 ZK9 7 ZK9 C8 C8 C 0 1 Y N N 9.532 23.707 21.678 0.177 0.893 -0.653 C8 ZK9 8 ZK9 N9 N9 N 0 1 Y N N 10.179 24.192 20.571 -0.470 0.267 0.316 N9 ZK9 9 ZK9 C10 C10 C 0 1 Y N N 10.982 25.309 20.647 -1.484 0.832 0.952 C10 ZK9 10 ZK9 C11 C11 C 0 1 Y N N 9.729 24.321 22.949 -0.194 2.175 -1.041 C11 ZK9 11 ZK9 C12 C12 C 0 1 Y N N 10.502 25.493 23.059 -1.249 2.800 -0.393 C12 ZK9 12 ZK9 C13 C13 C 0 1 Y N N 11.116 26.004 21.897 -1.905 2.113 0.619 C13 ZK9 13 ZK9 O14 O14 O 0 1 N N N 11.627 25.833 19.550 -2.119 0.152 1.940 O14 ZK9 14 ZK9 C15 C15 C 0 1 Y N N 11.340 25.336 18.301 -2.737 -0.907 1.354 C15 ZK9 15 ZK9 C16 C16 C 0 1 Y N N 10.221 25.841 17.609 -3.602 -1.703 2.091 C16 ZK9 16 ZK9 C17 C17 C 0 1 Y N N 10.044 25.577 16.242 -4.228 -2.779 1.493 C17 ZK9 17 ZK9 C18 C18 C 0 1 Y N N 10.974 24.783 15.550 -3.994 -3.063 0.160 C18 ZK9 18 ZK9 C19 C19 C 0 1 Y N N 12.059 24.209 16.235 -3.132 -2.272 -0.577 C19 ZK9 19 ZK9 C20 C20 C 0 1 Y N N 12.255 24.504 17.605 -2.508 -1.191 0.015 C20 ZK9 20 ZK9 C21 C21 C 0 1 N N N 13.045 23.341 15.477 -2.879 -2.585 -2.029 C21 ZK9 21 ZK9 N22 N22 N 1 1 N N N 14.196 24.160 15.062 -3.855 -1.870 -2.862 N22 ZK9 22 ZK9 C23 C23 C 0 1 N N N 8.788 18.508 18.877 5.610 -1.410 -0.051 C23 ZK9 23 ZK9 N24 N24 N 0 1 N N N 8.085 18.922 17.863 6.599 -1.483 0.837 N24 ZK9 24 ZK9 N25 N25 N 1 1 N N N 8.951 17.223 18.921 5.713 -2.045 -1.217 N25 ZK9 25 ZK9 F26 F26 F 0 1 N N N 9.176 23.797 24.033 0.471 2.809 -2.032 F26 ZK9 26 ZK9 C27 C27 C 0 1 N N N 10.712 26.169 24.411 -1.678 4.191 -0.782 C27 ZK9 27 ZK9 F28 F28 F 0 1 N N N 11.797 27.142 22.002 -2.941 2.683 1.272 F28 ZK9 28 ZK9 H29 H29 H 0 1 N N N 10.868 17.927 20.537 5.086 -0.013 2.200 H29 ZK9 29 ZK9 H30 H30 H 0 1 N N N 8.005 21.053 19.621 3.436 -1.062 -1.615 H30 ZK9 30 ZK9 H31 H31 H 0 1 N N N 10.721 21.476 22.937 1.239 1.432 1.069 H31 ZK9 31 ZK9 H32 H32 H 0 1 N N N 11.727 19.280 22.413 3.067 1.294 2.708 H32 ZK9 32 ZK9 H33 H33 H 0 1 N N N 9.539 26.486 18.132 -3.785 -1.482 3.133 H33 ZK9 33 ZK9 H34 H34 H 0 1 N N N 9.207 26.023 15.725 -4.902 -3.399 2.066 H34 ZK9 34 ZK9 H35 H35 H 0 1 N N N 10.860 24.617 14.487 -4.485 -3.905 -0.306 H35 ZK9 35 ZK9 H36 H36 H 0 1 N N N 13.130 24.151 18.127 -1.835 -0.573 -0.561 H36 ZK9 36 ZK9 H37 H37 H 0 1 N N N 13.394 22.572 16.165 -1.871 -2.269 -2.299 H37 ZK9 37 ZK9 H38 H38 H 0 1 N N N 12.568 22.872 14.615 -2.979 -3.658 -2.193 H38 ZK9 38 ZK9 H39 H39 H 0 1 N N N 14.042 24.612 14.164 -4.788 -2.162 -2.613 H39 ZK9 39 ZK9 H45 H45 H 0 1 N N N 14.410 24.858 15.771 -3.763 -0.877 -2.711 H45 ZK9 40 ZK9 H46 H46 H 0 1 N N N 15.046 23.609 14.985 -3.686 -2.079 -3.834 H46 ZK9 41 ZK9 H40 H40 H 0 1 N N N 7.630 18.200 17.299 7.395 -1.999 0.634 H40 ZK9 42 ZK9 H48 H48 H 0 1 N N N 7.855 19.897 17.694 6.524 -1.020 1.686 H48 ZK9 43 ZK9 H41 H41 H 0 1 N N N 8.464 16.622 18.251 4.992 -1.992 -1.864 H41 ZK9 44 ZK9 H47 H47 H 0 1 N N N 9.321 16.773 19.747 6.509 -2.561 -1.419 H47 ZK9 45 ZK9 H42 H42 H 0 1 N N N 9.891 25.949 25.096 -1.129 4.920 -0.187 H42 ZK9 46 ZK9 H43 H43 H 0 1 N N N 10.770 27.248 24.292 -1.467 4.353 -1.840 H43 ZK9 47 ZK9 H44 H44 H 0 1 N N N 11.644 25.814 24.851 -2.747 4.305 -0.603 H44 ZK9 48 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZK9 C1 C2 DOUB Y N 1 ZK9 C1 C6 SING Y N 2 ZK9 C1 H29 SING N N 3 ZK9 C2 C3 SING Y N 4 ZK9 C2 C23 SING N N 5 ZK9 C3 C4 DOUB Y N 6 ZK9 C3 H30 SING N N 7 ZK9 C4 C5 SING Y N 8 ZK9 C4 O7 SING N N 9 ZK9 C5 C6 DOUB Y N 10 ZK9 C5 H31 SING N N 11 ZK9 C6 H32 SING N N 12 ZK9 O7 C8 SING N N 13 ZK9 C8 N9 DOUB Y N 14 ZK9 C8 C11 SING Y N 15 ZK9 N9 C10 SING Y N 16 ZK9 C10 C13 DOUB Y N 17 ZK9 C10 O14 SING N N 18 ZK9 C11 C12 DOUB Y N 19 ZK9 C11 F26 SING N N 20 ZK9 C12 C13 SING Y N 21 ZK9 C12 C27 SING N N 22 ZK9 C13 F28 SING N N 23 ZK9 O14 C15 SING N N 24 ZK9 C15 C16 DOUB Y N 25 ZK9 C15 C20 SING Y N 26 ZK9 C16 C17 SING Y N 27 ZK9 C16 H33 SING N N 28 ZK9 C17 C18 DOUB Y N 29 ZK9 C17 H34 SING N N 30 ZK9 C18 C19 SING Y N 31 ZK9 C18 H35 SING N N 32 ZK9 C19 C20 DOUB Y N 33 ZK9 C19 C21 SING N N 34 ZK9 C20 H36 SING N N 35 ZK9 C21 N22 SING N N 36 ZK9 C21 H37 SING N N 37 ZK9 C21 H38 SING N N 38 ZK9 N22 H39 SING N N 39 ZK9 N22 H45 SING N N 40 ZK9 N22 H46 SING N N 41 ZK9 C23 N24 SING N N 42 ZK9 C23 N25 DOUB N N 43 ZK9 N24 H40 SING N N 44 ZK9 N24 H48 SING N N 45 ZK9 N25 H41 SING N N 46 ZK9 N25 H47 SING N N 47 ZK9 C27 H42 SING N N 48 ZK9 C27 H43 SING N N 49 ZK9 C27 H44 SING N N 50 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZK9 SMILES ACDLabs 10.04 "Fc3c(Oc1cc(C(=[NH2+])\N)ccc1)nc(Oc2cccc(c2)C[NH3+])c(F)c3C" ZK9 SMILES_CANONICAL CACTVS 3.341 "Cc1c(F)c(Oc2cccc(C[NH3+])c2)nc(Oc3cccc(c3)C(N)=[NH2+])c1F" ZK9 SMILES CACTVS 3.341 "Cc1c(F)c(Oc2cccc(C[NH3+])c2)nc(Oc3cccc(c3)C(N)=[NH2+])c1F" ZK9 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "Cc1c(c(nc(c1F)Oc2cccc(c2)C(=[NH2+])N)Oc3cccc(c3)C[NH3+])F" ZK9 SMILES "OpenEye OEToolkits" 1.5.0 "Cc1c(c(nc(c1F)Oc2cccc(c2)C(=[NH2+])N)Oc3cccc(c3)C[NH3+])F" ZK9 InChI InChI 1.03 "InChI=1S/C20H18F2N4O2/c1-11-16(21)19(27-14-6-2-4-12(8-14)10-23)26-20(17(11)22)28-15-7-3-5-13(9-15)18(24)25/h2-9H,10,23H2,1H3,(H3,24,25)/p+2" ZK9 InChIKey InChI 1.03 GJHKKJHVSXUANP-UHFFFAOYSA-P # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZK9 "SYSTEMATIC NAME" ACDLabs 10.04 "{amino[3-({6-[3-(ammoniomethyl)phenoxy]-3,5-difluoro-4-methylpyridin-2-yl}oxy)phenyl]methylidene}ammonium" ZK9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[3-[6-[3-(amino-azaniumylidene-methyl)phenoxy]-3,5-difluoro-4-methyl-pyridin-2-yl]oxyphenyl]methylazanium" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZK9 "Create component" 1999-08-24 EBI ZK9 "Modify descriptor" 2011-06-04 RCSB ZK9 "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id ZK9 _pdbx_chem_comp_synonyms.name ZK-806299 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##