data_ZKR # _chem_comp.id ZKR _chem_comp.name "[5-(trifluoromethyl)thiophen-2-yl]boronic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C5 H4 B F3 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-28 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 195.955 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZKR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8TAV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZKR B02 B1 B 0 1 N N N N N N -33.777 -25.464 3.034 -3.115 0.052 0.003 B02 ZKR 1 ZKR C04 C1 C 0 1 Y N N N N N -33.554 -24.008 3.544 -1.573 -0.246 0.002 C04 ZKR 2 ZKR C05 C2 C 0 1 Y N N N N N -34.447 -22.979 3.783 -1.007 -1.488 -0.001 C05 ZKR 3 ZKR C06 C3 C 0 1 Y N N N N N -33.877 -21.789 4.220 0.367 -1.461 -0.002 C06 ZKR 4 ZKR C07 C4 C 0 1 Y N N N N N -32.499 -21.796 4.352 0.910 -0.237 0.001 C07 ZKR 5 ZKR C08 C5 C 0 1 N N N N N N -31.524 -20.712 4.801 2.391 0.041 0.001 C08 ZKR 6 ZKR F09 F1 F 0 1 N N N N N N -32.134 -19.498 4.750 2.640 1.248 0.663 F09 ZKR 7 ZKR F10 F2 F 0 1 N N N N N N -30.425 -20.762 3.990 3.060 -0.998 0.657 F10 ZKR 8 ZKR F11 F3 F 0 1 N N N N N N -31.099 -20.911 6.077 2.848 0.130 -1.319 F11 ZKR 9 ZKR O01 O1 O 0 1 N N N N N N -34.212 -25.540 1.763 -3.578 1.395 0.000 O01 ZKR 10 ZKR O03 O2 O 0 1 N Y N N N N -32.834 -26.362 3.431 -4.045 -1.020 -0.000 O03 ZKR 11 ZKR S12 S1 S 0 1 Y N N N N N -32.010 -23.361 3.887 -0.300 0.967 -0.002 S12 ZKR 12 ZKR H051 H1 H 0 0 N N N N N N -35.512 -23.092 3.640 -1.582 -2.402 -0.003 H051 ZKR 13 ZKR H061 H2 H 0 0 N N N N N N -34.471 -20.915 4.442 0.964 -2.360 -0.004 H061 ZKR 14 ZKR H011 H3 H 0 0 N N N N N N -34.863 -24.865 1.610 -4.542 1.478 -0.003 H011 ZKR 15 ZKR H031 H4 H 0 0 N N N N N N -32.611 -26.206 4.341 -4.970 -0.738 0.001 H031 ZKR 16 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZKR O01 B02 SING N N 1 ZKR B02 O03 SING N N 2 ZKR B02 C04 SING N N 3 ZKR C04 C05 DOUB Y N 4 ZKR C04 S12 SING Y N 5 ZKR C05 C06 SING Y N 6 ZKR S12 C07 SING Y N 7 ZKR F10 C08 SING N N 8 ZKR C06 C07 DOUB Y N 9 ZKR C07 C08 SING N N 10 ZKR F09 C08 SING N N 11 ZKR C08 F11 SING N N 12 ZKR C05 H051 SING N N 13 ZKR C06 H061 SING N N 14 ZKR O01 H011 SING N N 15 ZKR O03 H031 SING N N 16 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZKR SMILES ACDLabs 12.01 "FC(F)(F)c1ccc(s1)B(O)O" ZKR InChI InChI 1.06 "InChI=1S/C5H4BF3O2S/c7-5(8,9)3-1-2-4(12-3)6(10)11/h1-2,10-11H" ZKR InChIKey InChI 1.06 NHBZQJOZVBHDAZ-UHFFFAOYSA-N ZKR SMILES_CANONICAL CACTVS 3.385 "OB(O)c1sc(cc1)C(F)(F)F" ZKR SMILES CACTVS 3.385 "OB(O)c1sc(cc1)C(F)(F)F" ZKR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B(c1ccc(s1)C(F)(F)F)(O)O" ZKR SMILES "OpenEye OEToolkits" 2.0.7 "B(c1ccc(s1)C(F)(F)F)(O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZKR "SYSTEMATIC NAME" ACDLabs 12.01 "[5-(trifluoromethyl)thiophen-2-yl]boronic acid" ZKR "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[5-(trifluoromethyl)thiophen-2-yl]boronic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZKR "Create component" 2023-06-28 RCSB ZKR "Initial release" 2024-07-17 RCSB ZKR "Modify PCM" 2024-09-27 PDBE # loop_ _pdbx_chem_comp_pcm.pcm_id _pdbx_chem_comp_pcm.comp_id _pdbx_chem_comp_pcm.modified_residue_id _pdbx_chem_comp_pcm.type _pdbx_chem_comp_pcm.category _pdbx_chem_comp_pcm.position _pdbx_chem_comp_pcm.polypeptide_position _pdbx_chem_comp_pcm.comp_id_linking_atom _pdbx_chem_comp_pcm.modified_residue_id_linking_atom _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession _pdbx_chem_comp_pcm.first_instance_model_db_code 1 ZKR HIS None "Covalent chemical modification" "Amino-acid side chain" "Any position" B02 NE2 ? ? 8TAV 2 ZKR SER None "Covalent chemical modification" "Amino-acid side chain" "Any position" B02 OG ? ? 8TAV #