data_ZKV # _chem_comp.id ZKV _chem_comp.name "(3-chloranyl-4-fluoranyl-phenyl)-[4-fluoranyl-4-[[(5-methylpyridin-2-yl)methylamino]methyl]piperidin-1-yl]methanone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H22 Cl F2 N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-28 _chem_comp.pdbx_modified_date 2024-05-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 393.858 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZKV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PKM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZKV C01 C1 C 0 1 N N N N N N 105.768 125.499 97.140 9.470 -0.943 -0.682 C01 ZKV 1 ZKV C02 C2 C 0 1 Y N N N N N 106.857 124.452 97.027 8.145 -0.539 -0.088 C02 ZKV 2 ZKV C03 C3 C 0 1 Y N N N N N 107.082 123.871 95.830 7.816 0.802 0.048 C03 ZKV 3 ZKV C04 C4 C 0 1 Y N N N N N 108.046 122.928 95.713 6.586 1.127 0.599 C04 ZKV 4 ZKV C05 C5 C 0 1 Y N N N N N 108.799 122.568 96.814 5.734 0.111 0.991 C05 ZKV 5 ZKV C06 C6 C 0 1 Y N N N N N 107.610 124.095 98.134 7.240 -1.499 0.322 C06 ZKV 6 ZKV C07 C7 C 0 1 N N N N N N 109.880 121.503 96.658 4.395 0.453 1.591 C07 ZKV 7 ZKV C08 C8 C 0 1 N N N N N N 110.742 119.874 95.171 2.046 0.764 1.089 C08 ZKV 8 ZKV C09 C9 C 0 1 N N N N N N 110.576 119.249 93.779 1.007 0.735 -0.033 C09 ZKV 9 ZKV C10 C10 C 0 1 N N N N N N 111.901 118.599 93.401 0.879 -0.691 -0.573 C10 ZKV 10 ZKV C11 C11 C 0 1 N N N N N N 111.820 117.870 92.085 -0.138 -0.709 -1.719 C11 ZKV 11 ZKV C12 C12 C 0 1 N N N N N N 109.478 117.266 92.566 -1.376 1.202 -0.620 C12 ZKV 12 ZKV C13 C13 C 0 1 N N N N N N 109.433 118.215 93.780 -0.346 1.199 0.514 C13 ZKV 13 ZKV C14 C14 C 0 1 N N N N N N 111.202 115.478 92.110 -2.559 -0.806 -1.369 C14 ZKV 14 ZKV C15 C15 C 0 1 Y N N N N N 110.173 114.380 92.299 -3.806 -0.248 -0.809 C15 ZKV 15 ZKV C16 C16 C 0 1 Y N N N N N 109.795 113.552 91.253 -4.180 1.065 -1.102 C16 ZKV 16 ZKV C17 C17 C 0 1 Y N N N N N 108.856 112.565 91.470 -5.345 1.582 -0.576 C17 ZKV 17 ZKV C18 C18 C 0 1 Y N N N N N 108.308 112.411 92.728 -6.146 0.800 0.243 C18 ZKV 18 ZKV C19 C19 C 0 1 Y N N N N N 108.690 113.229 93.760 -5.779 -0.505 0.538 C19 ZKV 19 ZKV C20 C20 C 0 1 Y N N N N N 109.625 114.210 93.551 -4.619 -1.034 0.012 C20 ZKV 20 ZKV F01 F1 F 0 1 N N N N N N 107.383 111.452 92.982 -7.286 1.312 0.755 F01 ZKV 21 ZKV F02 F2 F 0 1 N N N N N N 110.262 120.215 92.889 1.410 1.590 -1.064 F02 ZKV 22 ZKV N01 N1 N 0 1 Y N N N N N 108.574 123.158 98.011 6.080 -1.153 0.846 N01 ZKV 23 ZKV N02 N2 N 0 1 N N N N N N 109.569 120.673 95.506 3.368 0.435 0.540 N02 ZKV 24 ZKV N03 N3 N 0 1 N N N N N N 110.833 116.864 92.251 -1.400 -0.130 -1.241 N03 ZKV 25 ZKV O01 O1 O 0 1 N N N N N N 112.320 115.197 91.857 -2.577 -1.876 -1.946 O01 ZKV 26 ZKV CL01 CL1 CL 0 0 N N N N N N 107.970 113.008 95.365 -6.787 -1.477 1.564 CL01 ZKV 27 ZKV H1 H1 H 0 1 N N N N N N 104.816 125.012 97.397 9.368 -1.044 -1.762 H1 ZKV 28 ZKV H2 H2 H 0 1 N N N N N N 106.034 126.221 97.926 10.216 -0.181 -0.457 H2 ZKV 29 ZKV H3 H3 H 0 1 N N N N N N 105.663 126.024 96.179 9.783 -1.896 -0.255 H3 ZKV 30 ZKV H4 H4 H 0 1 N N N N N N 106.496 124.157 94.969 8.502 1.574 -0.268 H4 ZKV 31 ZKV H5 H5 H 0 1 N N N N N N 108.227 122.457 94.758 6.297 2.160 0.720 H5 ZKV 32 ZKV H6 H6 H 0 1 N N N N N N 107.427 124.564 99.090 7.487 -2.545 0.215 H6 ZKV 33 ZKV H7 H7 H 0 1 N N N N N N 109.915 120.879 97.563 4.142 -0.280 2.357 H7 ZKV 34 ZKV H8 H8 H 0 1 N N N N N N 110.856 121.988 96.509 4.439 1.446 2.038 H8 ZKV 35 ZKV H9 H9 H 0 1 N N N N N N 110.862 119.074 95.917 2.075 1.759 1.533 H9 ZKV 36 ZKV H10 H10 H 0 1 N N N N N N 111.634 120.518 95.177 1.778 0.033 1.852 H10 ZKV 37 ZKV H11 H11 H 0 1 N N N N N N 112.181 117.882 94.187 1.847 -1.029 -0.941 H11 ZKV 38 ZKV H12 H12 H 0 1 N N N N N N 112.671 119.381 93.326 0.541 -1.353 0.224 H12 ZKV 39 ZKV H13 H13 H 0 1 N N N N N N 112.791 117.415 91.840 0.242 -0.119 -2.554 H13 ZKV 40 ZKV H14 H14 H 0 1 N N N N N N 111.527 118.563 91.282 -0.306 -1.737 -2.042 H14 ZKV 41 ZKV H15 H15 H 0 1 N N N N N N 109.047 117.781 91.695 -2.362 1.435 -0.217 H15 ZKV 42 ZKV H16 H16 H 0 1 N N N N N N 108.883 116.369 92.793 -1.099 1.949 -1.364 H16 ZKV 43 ZKV H17 H17 H 0 1 N N N N N N 108.474 118.753 93.769 -0.673 0.519 1.300 H17 ZKV 44 ZKV H18 H18 H 0 1 N N N N N N 109.505 117.613 94.698 -0.248 2.206 0.919 H18 ZKV 45 ZKV H19 H19 H 0 1 N N N N N N 110.233 113.679 90.274 -3.557 1.675 -1.739 H19 ZKV 46 ZKV H20 H20 H 0 1 N N N N N N 108.552 111.917 90.661 -5.635 2.597 -0.803 H20 ZKV 47 ZKV H21 H21 H 0 1 N N N N N N 109.931 114.848 94.367 -4.337 -2.051 0.238 H21 ZKV 48 ZKV H22 H22 H 0 1 N N N N N N 109.325 121.254 94.729 3.352 -0.456 0.066 H22 ZKV 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZKV C16 C17 DOUB Y N 1 ZKV C16 C15 SING Y N 2 ZKV C17 C18 SING Y N 3 ZKV O01 C14 DOUB N N 4 ZKV C11 N03 SING N N 5 ZKV C11 C10 SING N N 6 ZKV C14 N03 SING N N 7 ZKV C14 C15 SING N N 8 ZKV N03 C12 SING N N 9 ZKV C15 C20 DOUB Y N 10 ZKV C12 C13 SING N N 11 ZKV C18 F01 SING N N 12 ZKV C18 C19 DOUB Y N 13 ZKV F02 C09 SING N N 14 ZKV C10 C09 SING N N 15 ZKV C20 C19 SING Y N 16 ZKV C19 CL01 SING N N 17 ZKV C09 C13 SING N N 18 ZKV C09 C08 SING N N 19 ZKV C08 N02 SING N N 20 ZKV N02 C07 SING N N 21 ZKV C04 C03 DOUB Y N 22 ZKV C04 C05 SING Y N 23 ZKV C03 C02 SING Y N 24 ZKV C07 C05 SING N N 25 ZKV C05 N01 DOUB Y N 26 ZKV C02 C01 SING N N 27 ZKV C02 C06 DOUB Y N 28 ZKV N01 C06 SING Y N 29 ZKV C01 H1 SING N N 30 ZKV C01 H2 SING N N 31 ZKV C01 H3 SING N N 32 ZKV C03 H4 SING N N 33 ZKV C04 H5 SING N N 34 ZKV C06 H6 SING N N 35 ZKV C07 H7 SING N N 36 ZKV C07 H8 SING N N 37 ZKV C08 H9 SING N N 38 ZKV C08 H10 SING N N 39 ZKV C10 H11 SING N N 40 ZKV C10 H12 SING N N 41 ZKV C11 H13 SING N N 42 ZKV C11 H14 SING N N 43 ZKV C12 H15 SING N N 44 ZKV C12 H16 SING N N 45 ZKV C13 H17 SING N N 46 ZKV C13 H18 SING N N 47 ZKV C16 H19 SING N N 48 ZKV C17 H20 SING N N 49 ZKV C20 H21 SING N N 50 ZKV N02 H22 SING N N 51 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZKV InChI InChI 1.06 "InChI=1S/C20H22ClF2N3O/c1-14-2-4-16(25-11-14)12-24-13-20(23)6-8-26(9-7-20)19(27)15-3-5-18(22)17(21)10-15/h2-5,10-11,24H,6-9,12-13H2,1H3" ZKV InChIKey InChI 1.06 PKZXLMVXBZICTF-UHFFFAOYSA-N ZKV SMILES_CANONICAL CACTVS 3.385 "Cc1ccc(CNCC2(F)CCN(CC2)C(=O)c3ccc(F)c(Cl)c3)nc1" ZKV SMILES CACTVS 3.385 "Cc1ccc(CNCC2(F)CCN(CC2)C(=O)c3ccc(F)c(Cl)c3)nc1" ZKV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(nc1)CNCC2(CCN(CC2)C(=O)c3ccc(c(c3)Cl)F)F" ZKV SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc(nc1)CNCC2(CCN(CC2)C(=O)c3ccc(c(c3)Cl)F)F" # _pdbx_chem_comp_identifier.comp_id ZKV _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3-chloranyl-4-fluoranyl-phenyl)-[4-fluoranyl-4-[[(5-methylpyridin-2-yl)methylamino]methyl]piperidin-1-yl]methanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZKV "Create component" 2023-06-28 PDBE ZKV "Initial release" 2024-05-29 RCSB #