data_ZM4 # _chem_comp.id ZM4 _chem_comp.name "3'-[(2S)-4-(2,4-diamino-6-ethylpyrimidin-5-yl)but-3-yn-2-yl]-4'-methyl[1,1'-biphenyl]-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H25 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-05-06 _chem_comp.pdbx_modified_date 2022-05-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 399.488 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZM4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7MQP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZM4 C4 C1 C 0 1 Y N N -16.874 -25.131 7.788 4.613 0.782 -0.266 C4 ZM4 1 ZM4 C5 C2 C 0 1 Y N N -16.694 -24.858 6.441 3.322 0.563 0.216 C5 ZM4 2 ZM4 C6 C3 C 0 1 Y N N -17.741 -24.264 5.733 2.743 1.549 1.040 C6 ZM4 3 ZM4 N1 N1 N 0 1 Y N N -18.828 -23.923 6.408 3.444 2.641 1.322 N1 ZM4 4 ZM4 N3 N2 N 0 1 Y N N -18.040 -24.765 8.378 5.242 1.898 0.063 N3 ZM4 5 ZM4 CBC C4 C 0 1 N N N -16.222 -27.185 8.777 4.963 0.058 -2.612 CBC ZM4 6 ZM4 CBB C5 C 0 1 N N N -15.873 -25.739 8.632 5.283 -0.242 -1.146 CBB ZM4 7 ZM4 C2 C6 C 0 1 Y N N -19.018 -24.143 7.707 4.667 2.804 0.840 C2 ZM4 8 ZM4 NBD N3 N 0 1 N N N -20.185 -23.768 8.291 5.365 3.956 1.157 NBD ZM4 9 ZM4 NAG N4 N 0 1 N N N -17.601 -23.975 4.397 1.467 1.383 1.545 NAG ZM4 10 ZM4 CAH C7 C 0 1 N N N -15.478 -25.245 5.704 2.605 -0.631 -0.116 CAH ZM4 11 ZM4 CAI C8 C 0 1 N N N -14.574 -25.528 5.183 2.017 -1.610 -0.389 CAI ZM4 12 ZM4 CAJ C9 C 0 1 N N S -13.285 -25.970 4.449 1.280 -2.837 -0.731 CAJ ZM4 13 ZM4 CAK C10 C 0 1 N N N -13.675 -26.842 3.234 1.113 -2.925 -2.249 CAK ZM4 14 ZM4 CAL C11 C 0 1 Y N N -12.408 -26.756 5.294 -0.077 -2.807 -0.077 CAL ZM4 15 ZM4 CAM C12 C 0 1 Y N N -12.907 -27.931 5.832 -0.916 -1.730 -0.281 CAM ZM4 16 ZM4 CAQ C13 C 0 1 Y N N -11.036 -26.379 5.540 -0.482 -3.861 0.722 CAQ ZM4 17 ZM4 CLAR C14 C 0 0 N N N -10.326 -24.878 4.760 0.436 -5.037 0.936 CLAR ZM4 18 ZM4 CAP C15 C 0 1 Y N N -10.221 -27.170 6.341 -1.727 -3.840 1.325 CAP ZM4 19 ZM4 CAO C16 C 0 1 Y N N -10.756 -28.336 6.888 -2.572 -2.766 1.133 CAO ZM4 20 ZM4 CAN C17 C 0 1 Y N N -12.094 -28.688 6.676 -2.171 -1.704 0.324 CAN ZM4 21 ZM4 CAS C18 C 0 1 Y N N -12.569 -29.873 7.201 -3.077 -0.549 0.109 CAS ZM4 22 ZM4 CAT C19 C 0 1 Y N N -13.325 -30.678 6.330 -4.333 -0.526 0.716 CAT ZM4 23 ZM4 CAU C20 C 0 1 Y N N -13.831 -31.899 6.738 -5.174 0.545 0.517 CAU ZM4 24 ZM4 CAV C21 C 0 1 Y N N -13.555 -32.331 8.036 -4.770 1.609 -0.292 CAV ZM4 25 ZM4 CAY C22 C 0 1 N N N -14.109 -33.564 8.368 -5.672 2.760 -0.506 CAY ZM4 26 ZM4 OAZ O1 O 0 1 N N N -15.273 -33.653 8.772 -6.766 2.780 0.023 OAZ ZM4 27 ZM4 NBA N5 N 0 1 N N N -13.337 -34.621 8.112 -5.281 3.786 -1.288 NBA ZM4 28 ZM4 CAW C23 C 0 1 Y N N -12.770 -31.549 8.936 -3.512 1.585 -0.900 CAW ZM4 29 ZM4 CAX C24 C 0 1 Y N N -12.265 -30.311 8.516 -2.670 0.515 -0.696 CAX ZM4 30 ZM4 H1 H1 H 0 1 N N N -15.477 -27.680 9.417 3.884 0.017 -2.764 H1 ZM4 31 ZM4 H2 H2 H 0 1 N N N -17.218 -27.278 9.235 5.329 1.052 -2.868 H2 ZM4 32 ZM4 H3 H3 H 0 1 N N N -16.229 -27.662 7.786 5.447 -0.683 -3.248 H3 ZM4 33 ZM4 H4 H4 H 0 1 N N N -14.880 -25.637 8.169 6.361 -0.202 -0.994 H4 ZM4 34 ZM4 H5 H5 H 0 1 N N N -15.869 -25.253 9.619 4.917 -1.236 -0.890 H5 ZM4 35 ZM4 H6 H6 H 0 1 N N N -20.781 -23.347 7.607 4.958 4.629 1.724 H6 ZM4 36 ZM4 H7 H7 H 0 1 N N N -20.637 -24.572 8.678 6.261 4.090 0.812 H7 ZM4 37 ZM4 H8 H8 H 0 1 N N N -18.417 -23.497 4.072 0.962 0.583 1.334 H8 ZM4 38 ZM4 H9 H9 H 0 1 N N N -16.799 -23.393 4.264 1.076 2.067 2.111 H9 ZM4 39 ZM4 H10 H10 H 0 1 N N N -12.759 -25.074 4.088 1.836 -3.705 -0.376 H10 ZM4 40 ZM4 H11 H11 H 0 1 N N N -12.765 -27.162 2.705 0.558 -2.057 -2.605 H11 ZM4 41 ZM4 H12 H12 H 0 1 N N N -14.228 -27.727 3.581 2.095 -2.948 -2.722 H12 ZM4 42 ZM4 H13 H13 H 0 1 N N N -14.310 -26.257 2.552 0.567 -3.834 -2.503 H13 ZM4 43 ZM4 H14 H14 H 0 1 N N N -13.911 -28.256 5.601 -0.600 -0.910 -0.908 H14 ZM4 44 ZM4 H15 H15 H 0 1 N N N -10.470 -24.015 5.426 1.132 -4.812 1.745 H15 ZM4 45 ZM4 H16 H16 H 0 1 N N N -9.251 -25.030 4.584 -0.154 -5.915 1.199 H16 ZM4 46 ZM4 H17 H17 H 0 1 N N N -10.831 -24.689 3.801 0.994 -5.233 0.021 H17 ZM4 47 ZM4 H18 H18 H 0 1 N N N -9.197 -26.888 6.535 -2.038 -4.666 1.948 H18 ZM4 48 ZM4 H19 H19 H 0 1 N N N -10.127 -28.979 7.486 -3.543 -2.750 1.604 H19 ZM4 49 ZM4 H20 H20 H 0 1 N N N -13.514 -30.336 5.323 -4.645 -1.349 1.342 H20 ZM4 50 ZM4 H21 H21 H 0 1 N N N -14.425 -32.503 6.068 -6.147 0.563 0.987 H21 ZM4 51 ZM4 H22 H22 H 0 1 N N N -13.694 -35.545 8.246 -4.408 3.769 -1.710 H22 ZM4 52 ZM4 H23 H23 H 0 1 N N N -12.401 -34.489 7.786 -5.873 4.541 -1.428 H23 ZM4 53 ZM4 H24 H24 H 0 1 N N N -12.567 -31.909 9.934 -3.198 2.407 -1.526 H24 ZM4 54 ZM4 H25 H25 H 0 1 N N N -11.660 -29.706 9.176 -1.696 0.498 -1.162 H25 ZM4 55 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZM4 C4 C5 DOUB Y N 1 ZM4 C4 N3 SING Y N 2 ZM4 C4 CBB SING N N 3 ZM4 C5 C6 SING Y N 4 ZM4 C5 CAH SING N N 5 ZM4 C6 N1 DOUB Y N 6 ZM4 C6 NAG SING N N 7 ZM4 N1 C2 SING Y N 8 ZM4 N3 C2 DOUB Y N 9 ZM4 CBC CBB SING N N 10 ZM4 C2 NBD SING N N 11 ZM4 CAH CAI TRIP N N 12 ZM4 CAI CAJ SING N N 13 ZM4 CAJ CAK SING N N 14 ZM4 CAJ CAL SING N N 15 ZM4 CAL CAM DOUB Y N 16 ZM4 CAL CAQ SING Y N 17 ZM4 CAM CAN SING Y N 18 ZM4 CAQ CAP DOUB Y N 19 ZM4 CAP CAO SING Y N 20 ZM4 CAO CAN DOUB Y N 21 ZM4 CAN CAS SING N N 22 ZM4 CAS CAT DOUB Y N 23 ZM4 CAS CAX SING Y N 24 ZM4 CAT CAU SING Y N 25 ZM4 CAU CAV DOUB Y N 26 ZM4 CAV CAY SING N N 27 ZM4 CAV CAW SING Y N 28 ZM4 CAY OAZ DOUB N N 29 ZM4 CAY NBA SING N N 30 ZM4 CAW CAX DOUB Y N 31 ZM4 CAQ CLAR SING N N 32 ZM4 CBC H1 SING N N 33 ZM4 CBC H2 SING N N 34 ZM4 CBC H3 SING N N 35 ZM4 CBB H4 SING N N 36 ZM4 CBB H5 SING N N 37 ZM4 NBD H6 SING N N 38 ZM4 NBD H7 SING N N 39 ZM4 NAG H8 SING N N 40 ZM4 NAG H9 SING N N 41 ZM4 CAJ H10 SING N N 42 ZM4 CAK H11 SING N N 43 ZM4 CAK H12 SING N N 44 ZM4 CAK H13 SING N N 45 ZM4 CAM H14 SING N N 46 ZM4 CLAR H15 SING N N 47 ZM4 CLAR H16 SING N N 48 ZM4 CLAR H17 SING N N 49 ZM4 CAP H18 SING N N 50 ZM4 CAO H19 SING N N 51 ZM4 CAT H20 SING N N 52 ZM4 CAU H21 SING N N 53 ZM4 NBA H22 SING N N 54 ZM4 NBA H23 SING N N 55 ZM4 CAW H24 SING N N 56 ZM4 CAX H25 SING N N 57 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZM4 SMILES ACDLabs 12.01 "CCc1nc(N)nc(N)c1C#CC(C)c1cc(ccc1C)c1ccc(cc1)C(N)=O" ZM4 InChI InChI 1.03 "InChI=1S/C24H25N5O/c1-4-21-19(22(25)29-24(27)28-21)12-6-15(3)20-13-18(7-5-14(20)2)16-8-10-17(11-9-16)23(26)30/h5,7-11,13,15H,4H2,1-3H3,(H2,26,30)(H4,25,27,28,29)/t15-/m0/s1" ZM4 InChIKey InChI 1.03 YJUMTSDIAPDMCM-HNNXBMFYSA-N ZM4 SMILES_CANONICAL CACTVS 3.385 "CCc1nc(N)nc(N)c1C#C[C@H](C)c2cc(ccc2C)c3ccc(cc3)C(N)=O" ZM4 SMILES CACTVS 3.385 "CCc1nc(N)nc(N)c1C#C[CH](C)c2cc(ccc2C)c3ccc(cc3)C(N)=O" ZM4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCc1c(c(nc(n1)N)N)C#C[C@H](C)c2cc(ccc2C)c3ccc(cc3)C(=O)N" ZM4 SMILES "OpenEye OEToolkits" 2.0.7 "CCc1c(c(nc(n1)N)N)C#CC(C)c2cc(ccc2C)c3ccc(cc3)C(=O)N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZM4 "SYSTEMATIC NAME" ACDLabs 12.01 "3'-[(2S)-4-(2,4-diamino-6-ethylpyrimidin-5-yl)but-3-yn-2-yl]-4'-methyl[1,1'-biphenyl]-4-carboxamide" ZM4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[3-[(2~{S})-4-[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]but-3-yn-2-yl]-4-methyl-phenyl]benzamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZM4 "Create component" 2021-05-06 RCSB ZM4 "Initial release" 2022-05-11 RCSB ##