data_ZMC # _chem_comp.id ZMC _chem_comp.name "~{N}-(1,3-benzodioxol-5-ylmethyl)-1-pyridin-4-yl-methanamine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H14 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-28 _chem_comp.pdbx_modified_date 2024-01-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 242.273 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZMC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PL4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZMC N1 N1 N 0 1 Y N N N N N 2.979 -6.673 76.966 -5.520 0.907 -1.092 N1 ZMC 1 ZMC C4 C1 C 0 1 Y N N N N N 10.921 -9.271 74.737 2.013 0.358 0.912 C4 ZMC 2 ZMC C5 C2 C 0 1 Y N N N N N 9.697 -9.468 75.428 1.310 -0.801 0.640 C5 ZMC 3 ZMC C6 C3 C 0 1 N N N N N N 9.001 -8.272 75.972 0.009 -1.074 1.349 C6 ZMC 4 ZMC C7 C4 C 0 1 N N N N N N 6.476 -9.048 76.154 -2.389 -0.758 1.232 C7 ZMC 5 ZMC C8 C5 C 0 1 Y N N N N N 5.258 -8.226 76.419 -3.502 -0.166 0.406 C8 ZMC 6 ZMC C10 C6 C 0 1 Y N N N N N 4.025 -6.728 77.839 -5.149 -0.338 -1.314 C10 ZMC 7 ZMC C13 C7 C 0 1 N N N N N N 12.746 -12.012 73.216 5.311 1.183 -0.233 C13 ZMC 8 ZMC N N2 N 0 1 N N N N N N 7.547 -8.233 75.360 -1.102 -0.510 0.570 N ZMC 9 ZMC C C8 C 0 1 Y N N N N N 9.120 -10.726 75.588 1.798 -1.709 -0.281 C ZMC 10 ZMC O O1 O 0 1 N N N N N N 12.620 -10.598 73.516 4.080 1.661 0.344 O ZMC 11 ZMC C1 C9 C 0 1 Y N N N N N 9.685 -11.891 75.074 2.991 -1.462 -0.934 C1 ZMC 12 ZMC C11 C10 C 0 1 Y N N N N N 3.069 -7.399 75.812 -4.944 1.649 -0.166 C11 ZMC 13 ZMC C12 C11 C 0 1 Y N N N N N 4.195 -8.191 75.492 -3.920 1.140 0.610 C12 ZMC 14 ZMC C2 C12 C 0 1 Y N N N N N 10.861 -11.726 74.394 3.701 -0.303 -0.666 C2 ZMC 15 ZMC C3 C13 C 0 1 Y N N N N N 11.468 -10.439 74.231 3.207 0.614 0.258 C3 ZMC 16 ZMC C9 C14 C 0 1 Y N N N N N 5.188 -7.494 77.610 -4.132 -0.915 -0.576 C9 ZMC 17 ZMC O1 O2 O 0 1 N N N N N N 11.620 -12.688 73.784 4.881 0.171 -1.163 O1 ZMC 18 ZMC H1 H1 H 0 1 N N N N N N 11.382 -8.302 74.617 1.629 1.066 1.631 H1 ZMC 19 ZMC H2 H2 H 0 1 N N N N N N 9.549 -7.361 75.690 -0.130 -2.151 1.451 H2 ZMC 20 ZMC H3 H3 H 0 1 N N N N N N 8.943 -8.341 77.068 0.030 -0.615 2.337 H3 ZMC 21 ZMC H4 H4 H 0 1 N N N N N N 6.191 -9.933 75.566 -2.385 -0.297 2.220 H4 ZMC 22 ZMC H5 H5 H 0 1 N N N N N N 6.908 -9.369 77.113 -2.544 -1.832 1.334 H5 ZMC 23 ZMC H6 H6 H 0 1 N N N N N N 3.960 -6.156 78.753 -5.645 -0.915 -2.081 H6 ZMC 24 ZMC H7 H7 H 0 1 N N N N N N 12.761 -12.162 72.126 5.827 1.989 -0.756 H7 ZMC 25 ZMC H8 H8 H 0 1 N N N N N N 7.249 -7.279 75.327 -0.964 0.476 0.406 H8 ZMC 26 ZMC H10 H10 H 0 1 N N N N N N 8.192 -10.801 76.136 1.246 -2.613 -0.491 H10 ZMC 27 ZMC H11 H11 H 0 1 N N N N N N 9.226 -12.860 75.204 3.370 -2.173 -1.653 H11 ZMC 28 ZMC H12 H12 H 0 1 N N N N N N 2.245 -7.366 75.115 -5.275 2.665 -0.014 H12 ZMC 29 ZMC H13 H13 H 0 1 N N N N N N 4.240 -8.750 74.569 -3.451 1.752 1.367 H13 ZMC 30 ZMC H14 H14 H 0 1 N N N N N N 5.995 -7.515 78.328 -3.832 -1.935 -0.763 H14 ZMC 31 ZMC H15 H15 H 0 1 N N N N N N 13.676 -12.405 73.653 5.952 0.751 0.536 H15 ZMC 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZMC C13 O SING N N 1 ZMC C13 O1 SING N N 2 ZMC O C3 SING N N 3 ZMC O1 C2 SING N N 4 ZMC C3 C2 DOUB Y N 5 ZMC C3 C4 SING Y N 6 ZMC C2 C1 SING Y N 7 ZMC C4 C5 DOUB Y N 8 ZMC C1 C DOUB Y N 9 ZMC N C6 SING N N 10 ZMC N C7 SING N N 11 ZMC C5 C SING Y N 12 ZMC C5 C6 SING N N 13 ZMC C12 C11 DOUB Y N 14 ZMC C12 C8 SING Y N 15 ZMC C11 N1 SING Y N 16 ZMC C7 C8 SING N N 17 ZMC C8 C9 DOUB Y N 18 ZMC N1 C10 DOUB Y N 19 ZMC C9 C10 SING Y N 20 ZMC C4 H1 SING N N 21 ZMC C6 H2 SING N N 22 ZMC C6 H3 SING N N 23 ZMC C7 H4 SING N N 24 ZMC C7 H5 SING N N 25 ZMC C10 H6 SING N N 26 ZMC C13 H7 SING N N 27 ZMC N H8 SING N N 28 ZMC C H10 SING N N 29 ZMC C1 H11 SING N N 30 ZMC C11 H12 SING N N 31 ZMC C12 H13 SING N N 32 ZMC C9 H14 SING N N 33 ZMC C13 H15 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZMC InChI InChI 1.06 "InChI=1S/C14H14N2O2/c1-2-13-14(18-10-17-13)7-12(1)9-16-8-11-3-5-15-6-4-11/h1-7,16H,8-10H2" ZMC InChIKey InChI 1.06 UGGCQMVKRPFZEA-UHFFFAOYSA-N ZMC SMILES_CANONICAL CACTVS 3.385 "C1Oc2ccc(CNCc3ccncc3)cc2O1" ZMC SMILES CACTVS 3.385 "C1Oc2ccc(CNCc3ccncc3)cc2O1" ZMC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1CNCc3ccncc3)OCO2" ZMC SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1CNCc3ccncc3)OCO2" # _pdbx_chem_comp_identifier.comp_id ZMC _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-(1,3-benzodioxol-5-ylmethyl)-1-pyridin-4-yl-methanamine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZMC "Create component" 2023-06-28 PDBE ZMC "Initial release" 2024-01-31 RCSB #