data_ZMY # _chem_comp.id ZMY _chem_comp.name "(9aP,12aR)-4-(2,2-difluoropropyl)-12-{[(5-fluoro-2,3-dihydro-1-benzofuran-4-yl)methyl]amino}-7-(trifluoromethyl)-4,5-dihydro-3H-2,4,8,11,12a-pentaazabenzo[4,5]cycloocta[1,2,3-cd]inden-3-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H20 F6 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-05-11 _chem_comp.pdbx_modified_date 2021-10-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 562.466 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZMY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7MSD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZMY C19 C1 C 0 1 Y N N 11.212 26.622 21.887 -7.707 -0.300 0.619 C19 ZMY 1 ZMY C1 C2 C 0 1 N N N 20.716 23.067 27.116 4.044 -2.640 -0.138 C1 ZMY 2 ZMY C14 C3 C 0 1 N N N 13.566 23.838 20.849 -4.344 1.394 0.257 C14 ZMY 3 ZMY C15 C4 C 0 1 Y N N 12.901 25.195 20.935 -5.757 0.953 -0.022 C15 ZMY 4 ZMY C16 C5 C 0 1 Y N N 11.870 25.405 21.866 -6.407 0.123 0.864 C16 ZMY 5 ZMY C13 C6 C 0 1 Y N N 15.347 23.865 22.549 -2.055 0.630 -0.207 C13 ZMY 6 ZMY C12 C7 C 0 1 Y N N 14.861 23.934 24.769 -0.286 1.934 0.571 C12 ZMY 7 ZMY C11 C8 C 0 1 Y N N 16.168 23.937 25.181 0.667 1.101 0.010 C11 ZMY 8 ZMY C8 C9 C 0 1 N N N 16.513 24.695 30.763 6.144 2.598 0.490 C8 ZMY 9 ZMY C9 C10 C 0 1 Y N N 15.812 25.172 27.233 2.584 2.656 -0.422 C9 ZMY 10 ZMY C10 C11 C 0 1 Y N N 16.512 24.162 26.562 2.106 1.446 0.070 C10 ZMY 11 ZMY C7 C12 C 0 1 Y N N 16.641 24.553 29.263 4.710 2.164 0.323 C7 ZMY 12 ZMY C6 C13 C 0 1 Y N N 17.447 23.561 28.702 4.314 0.930 0.809 C6 ZMY 13 ZMY C5 C14 C 0 1 Y N N 17.393 23.375 27.323 2.996 0.540 0.651 C5 ZMY 14 ZMY C4 C15 C 0 1 N N N 18.353 22.400 26.677 2.580 -0.867 0.982 C4 ZMY 15 ZMY C3 C16 C 0 1 N N N 22.794 21.957 27.991 4.675 -4.992 0.419 C3 ZMY 16 ZMY C2 C17 C 0 1 N N N 21.573 21.812 27.049 3.507 -4.016 0.264 C2 ZMY 17 ZMY O1 O1 O 0 1 N N N 10.242 26.639 22.864 -8.153 -1.122 1.609 O1 ZMY 18 ZMY C17 C18 C 0 1 N N N 11.322 24.489 22.926 -5.984 -0.486 2.186 C17 ZMY 19 ZMY C18 C19 C 0 1 N N N 10.206 25.326 23.507 -7.339 -0.938 2.780 C18 ZMY 20 ZMY F5 F1 F 0 1 N N N 14.282 26.128 19.295 -5.769 2.197 -2.041 F5 ZMY 21 ZMY C22 C20 C 0 1 Y N N 13.214 26.258 20.107 -6.404 1.382 -1.170 C22 ZMY 22 ZMY C21 C21 C 0 1 Y N N 12.553 27.461 20.119 -7.701 0.970 -1.422 C21 ZMY 23 ZMY C20 C22 C 0 1 Y N N 11.524 27.652 21.021 -8.351 0.135 -0.536 C20 ZMY 24 ZMY N3 N1 N 0 1 N N N 14.963 23.874 21.258 -3.407 0.435 -0.333 N3 ZMY 25 ZMY N2 N2 N 0 1 Y N N 14.430 23.904 23.480 -1.586 1.677 0.450 N2 ZMY 26 ZMY N4 N3 N 0 1 Y N N 16.683 23.847 22.815 -1.170 -0.258 -0.754 N4 ZMY 27 ZMY C25 C23 C 0 1 Y N N 17.766 23.822 21.982 -1.368 -1.414 -1.426 C25 ZMY 28 ZMY N5 N4 N 0 1 Y N N 18.891 23.799 22.650 -0.218 -1.965 -1.690 N5 ZMY 29 ZMY C24 C24 C 0 1 Y N N 18.514 23.802 23.985 0.785 -1.179 -1.220 C24 ZMY 30 ZMY C C25 C 0 1 N N N 19.686 23.712 24.919 2.208 -1.513 -1.324 C ZMY 31 ZMY O O2 O 0 1 N N N 20.758 24.195 24.569 2.731 -1.640 -2.416 O ZMY 32 ZMY C23 C26 C 0 1 Y N N 17.141 23.856 24.135 0.206 -0.065 -0.648 C23 ZMY 33 ZMY N1 N5 N 0 1 Y N N 15.859 25.374 28.555 3.858 2.968 -0.284 N1 ZMY 34 ZMY F4 F2 F 0 1 N N N 16.197 25.941 31.135 6.890 2.179 -0.617 F4 ZMY 35 ZMY F3 F3 F 0 1 N N N 15.552 23.920 31.278 6.200 3.993 0.590 F3 ZMY 36 ZMY F2 F4 F 0 1 N N N 17.635 24.363 31.406 6.672 2.026 1.653 F2 ZMY 37 ZMY N N6 N 0 1 N N N 19.583 23.058 26.197 2.937 -1.681 -0.191 N ZMY 38 ZMY F F5 F 0 1 N N N 22.014 21.566 25.780 2.821 -3.912 1.478 F ZMY 39 ZMY F1 F6 F 0 1 N N N 20.839 20.701 27.317 2.637 -4.484 -0.726 F1 ZMY 40 ZMY H1 H1 H 0 1 N N N 21.350 23.933 26.876 4.777 -2.308 0.597 H1 ZMY 41 ZMY H H2 H 0 1 N N N 20.330 23.169 28.141 4.515 -2.705 -1.118 H ZMY 42 ZMY H12 H3 H 0 1 N N N 13.025 23.138 21.503 -4.178 2.380 -0.179 H12 ZMY 43 ZMY H11 H4 H 0 1 N N N 13.512 23.484 19.809 -4.184 1.442 1.334 H11 ZMY 44 ZMY H9 H5 H 0 1 N N N 14.104 23.958 25.539 0.031 2.810 1.117 H9 ZMY 45 ZMY H8 H6 H 0 1 N N N 15.193 25.832 26.644 1.911 3.340 -0.918 H8 ZMY 46 ZMY H7 H7 H 0 1 N N N 18.094 22.955 29.320 5.022 0.282 1.303 H7 ZMY 47 ZMY H5 H8 H 0 1 N N N 17.851 21.923 25.822 3.117 -1.221 1.862 H5 ZMY 48 ZMY H6 H9 H 0 1 N N N 18.628 21.633 27.416 1.505 -0.910 1.158 H6 ZMY 49 ZMY H4 H10 H 0 1 N N N 22.446 22.155 29.015 5.353 -4.628 1.191 H4 ZMY 50 ZMY H3 H11 H 0 1 N N N 23.380 21.026 27.977 4.293 -5.972 0.705 H3 ZMY 51 ZMY H2 H12 H 0 1 N N N 23.423 22.792 27.650 5.210 -5.073 -0.527 H2 ZMY 52 ZMY H13 H13 H 0 1 N N N 10.938 23.555 22.490 -5.324 -1.339 2.029 H13 ZMY 53 ZMY H14 H14 H 0 1 N N N 12.083 24.253 23.685 -5.508 0.259 2.824 H14 ZMY 54 ZMY H15 H15 H 0 1 N N N 10.350 25.438 24.592 -7.756 -0.163 3.422 H15 ZMY 55 ZMY H16 H16 H 0 1 N N N 9.237 24.842 23.313 -7.229 -1.875 3.325 H16 ZMY 56 ZMY H18 H17 H 0 1 N N N 12.833 28.247 19.433 -8.207 1.305 -2.315 H18 ZMY 57 ZMY H17 H18 H 0 1 N N N 10.977 28.583 21.048 -9.363 -0.182 -0.741 H17 ZMY 58 ZMY H10 H19 H 0 1 N N N 15.395 23.077 20.836 -3.743 -0.338 -0.814 H10 ZMY 59 ZMY H19 H20 H 0 1 N N N 17.701 23.821 20.904 -2.331 -1.819 -1.700 H19 ZMY 60 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZMY F5 C22 SING N N 1 ZMY C22 C21 DOUB Y N 2 ZMY C22 C15 SING Y N 3 ZMY C21 C20 SING Y N 4 ZMY C14 C15 SING N N 5 ZMY C14 N3 SING N N 6 ZMY C15 C16 DOUB Y N 7 ZMY C20 C19 DOUB Y N 8 ZMY N3 C13 SING N N 9 ZMY C16 C19 SING Y N 10 ZMY C16 C17 SING N N 11 ZMY C19 O1 SING N N 12 ZMY C25 N5 DOUB Y N 13 ZMY C25 N4 SING Y N 14 ZMY C13 N4 SING Y N 15 ZMY C13 N2 DOUB Y N 16 ZMY N5 C24 SING Y N 17 ZMY N4 C23 SING Y N 18 ZMY O1 C18 SING N N 19 ZMY C17 C18 SING N N 20 ZMY N2 C12 SING Y N 21 ZMY C24 C23 DOUB Y N 22 ZMY C24 C SING N N 23 ZMY C23 C11 SING Y N 24 ZMY O C DOUB N N 25 ZMY C12 C11 DOUB Y N 26 ZMY C N SING N N 27 ZMY C11 C10 SING N N 28 ZMY F C2 SING N N 29 ZMY N C4 SING N N 30 ZMY N C1 SING N N 31 ZMY C10 C9 DOUB Y N 32 ZMY C10 C5 SING Y N 33 ZMY C4 C5 SING N N 34 ZMY C2 C1 SING N N 35 ZMY C2 F1 SING N N 36 ZMY C2 C3 SING N N 37 ZMY C9 N1 SING Y N 38 ZMY C5 C6 DOUB Y N 39 ZMY N1 C7 DOUB Y N 40 ZMY C6 C7 SING Y N 41 ZMY C7 C8 SING N N 42 ZMY C8 F4 SING N N 43 ZMY C8 F3 SING N N 44 ZMY C8 F2 SING N N 45 ZMY C1 H1 SING N N 46 ZMY C1 H SING N N 47 ZMY C14 H12 SING N N 48 ZMY C14 H11 SING N N 49 ZMY C12 H9 SING N N 50 ZMY C9 H8 SING N N 51 ZMY C6 H7 SING N N 52 ZMY C4 H5 SING N N 53 ZMY C4 H6 SING N N 54 ZMY C3 H4 SING N N 55 ZMY C3 H3 SING N N 56 ZMY C3 H2 SING N N 57 ZMY C17 H13 SING N N 58 ZMY C17 H14 SING N N 59 ZMY C18 H15 SING N N 60 ZMY C18 H16 SING N N 61 ZMY C21 H18 SING N N 62 ZMY C20 H17 SING N N 63 ZMY N3 H10 SING N N 64 ZMY C25 H19 SING N N 65 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZMY SMILES ACDLabs 12.01 "FC(F)(F)c1ncc2c3cnc(NCc4c(F)ccc5OCCc45)n4cnc(c34)C(=O)N(CC(C)(F)F)Cc2c1" ZMY InChI InChI 1.03 "InChI=1S/C26H20F6N6O2/c1-25(28,29)11-37-10-13-6-20(26(30,31)32)33-7-15(13)17-9-35-24(38-12-36-21(22(17)38)23(37)39)34-8-16-14-4-5-40-19(14)3-2-18(16)27/h2-3,6-7,9,12H,4-5,8,10-11H2,1H3,(H,34,35)" ZMY InChIKey InChI 1.03 VDAXDVLAEBLTFM-UHFFFAOYSA-N ZMY SMILES_CANONICAL CACTVS 3.385 "CC(F)(F)CN1Cc2cc(ncc2c3cnc(NCc4c(F)ccc5OCCc45)n6cnc(C1=O)c36)C(F)(F)F" ZMY SMILES CACTVS 3.385 "CC(F)(F)CN1Cc2cc(ncc2c3cnc(NCc4c(F)ccc5OCCc45)n6cnc(C1=O)c36)C(F)(F)F" ZMY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(CN1Cc2cc(ncc2-c3cnc(n4c3c(nc4)C1=O)NCc5c(ccc6c5CCO6)F)C(F)(F)F)(F)F" ZMY SMILES "OpenEye OEToolkits" 2.0.7 "CC(CN1Cc2cc(ncc2-c3cnc(n4c3c(nc4)C1=O)NCc5c(ccc6c5CCO6)F)C(F)(F)F)(F)F" # _pdbx_chem_comp_identifier.comp_id ZMY _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "(9aP,12aR)-4-(2,2-difluoropropyl)-12-{[(5-fluoro-2,3-dihydro-1-benzofuran-4-yl)methyl]amino}-7-(trifluoromethyl)-4,5-dihydro-3H-2,4,8,11,12a-pentaazabenzo[4,5]cycloocta[1,2,3-cd]inden-3-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZMY "Create component" 2021-05-11 RCSB ZMY "Initial release" 2021-10-20 RCSB ##