data_ZO7 # _chem_comp.id ZO7 _chem_comp.name "N-{2-chloro-5-[({2-[3-(prop-1-en-2-yl)phenyl]propan-2-yl}carbamoyl)amino]phenyl}-beta-D-arabinopyranosylamine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H30 Cl N3 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-05-14 _chem_comp.pdbx_modified_date 2021-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 475.965 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZO7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7MTU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZO7 C1 C1 C 0 1 Y N N -17.613 -24.461 -4.306 -5.342 0.511 -0.256 C1 ZO7 1 ZO7 C10 C2 C 0 1 N N N -15.469 -25.902 -6.085 -1.757 1.399 -0.069 C10 ZO7 2 ZO7 C11 C3 C 0 1 N N N -16.664 -25.555 -3.904 -4.156 1.408 -0.499 C11 ZO7 3 ZO7 C12 C4 C 0 1 N N N -17.405 -26.889 -3.888 -3.976 1.619 -2.004 C12 ZO7 4 ZO7 C13 C5 C 0 1 N N N -16.200 -25.244 -2.486 -4.389 2.759 0.181 C13 ZO7 5 ZO7 C17 C6 C 0 1 Y N N -13.863 -26.106 -7.919 0.571 1.511 0.410 C17 ZO7 6 ZO7 C18 C7 C 0 1 Y N N -12.510 -25.970 -8.209 0.594 2.895 0.534 C18 ZO7 7 ZO7 C19 C8 C 0 1 Y N N -12.030 -26.211 -9.490 1.797 3.573 0.503 C19 ZO7 8 ZO7 C2 C9 C 0 1 Y N N -18.981 -24.618 -4.106 -6.616 1.050 -0.206 C2 ZO7 9 ZO7 C20 C10 C 0 1 Y N N -12.907 -26.592 -10.496 2.982 2.877 0.350 C20 ZO7 10 ZO7 C21 C11 C 0 1 Y N N -14.256 -26.730 -10.222 2.966 1.493 0.226 C21 ZO7 11 ZO7 C22 C12 C 0 1 Y N N -14.736 -26.489 -8.937 1.758 0.809 0.261 C22 ZO7 12 ZO7 C24 C13 C 0 1 N N R -16.527 -27.255 -10.968 4.145 -0.669 -0.061 C24 ZO7 13 ZO7 C25 C14 C 0 1 N N S -17.173 -27.220 -12.353 5.254 -1.111 -1.018 C25 ZO7 14 ZO7 C26 C15 C 0 1 N N R -16.827 -28.463 -13.161 5.267 -2.640 -1.103 C26 ZO7 15 ZO7 C27 C16 C 0 1 N N R -17.149 -29.705 -12.346 5.450 -3.217 0.304 C27 ZO7 16 ZO7 C29 C17 C 0 1 N N N -16.395 -29.647 -11.024 4.333 -2.694 1.211 C29 ZO7 17 ZO7 C3 C18 C 0 1 Y N N -19.861 -23.603 -4.464 -7.710 0.234 0.017 C3 ZO7 18 ZO7 C4 C19 C 0 1 Y N N -19.373 -22.423 -5.015 -7.538 -1.124 0.191 C4 ZO7 19 ZO7 C5 C20 C 0 1 Y N N -18.006 -22.262 -5.205 -6.256 -1.674 0.142 C5 ZO7 20 ZO7 C6 C21 C 0 1 Y N N -17.127 -23.278 -4.847 -5.157 -0.845 -0.089 C6 ZO7 21 ZO7 C7 C22 C 0 1 N N N -17.468 -20.996 -5.801 -6.064 -3.127 0.328 C7 ZO7 22 ZO7 C8 C23 C 0 1 N N N -16.165 -20.791 -5.828 -5.601 -3.868 -0.669 C8 ZO7 23 ZO7 C9 C24 C 0 1 N N N -18.294 -20.092 -6.295 -6.395 -3.767 1.652 C9 ZO7 24 ZO7 N1 N1 N 0 1 N N N -15.099 -27.108 -11.216 4.163 0.790 0.070 N1 ZO7 25 ZO7 N3 N2 N 0 1 N N N -15.498 -25.588 -4.786 -2.951 0.785 0.054 N3 ZO7 26 ZO7 N4 N3 N 0 1 N N N -14.249 -25.851 -6.634 -0.649 0.825 0.440 N4 ZO7 27 ZO7 O2 O1 O 0 1 N N N -16.481 -26.205 -6.700 -1.681 2.470 -0.638 O2 ZO7 28 ZO7 O3 O2 O 0 1 N N N -16.808 -28.489 -10.298 4.358 -1.265 1.220 O3 ZO7 29 ZO7 O4 O3 O 0 1 N N N -16.719 -26.059 -13.059 6.516 -0.648 -0.533 O4 ZO7 30 ZO7 O5 O4 O 0 1 N N N -17.580 -28.476 -14.380 4.029 -3.099 -1.650 O5 ZO7 31 ZO7 O6 O5 O 0 1 N N N -18.557 -29.764 -12.095 5.391 -4.643 0.247 O6 ZO7 32 ZO7 CL CL1 CL 0 0 N N N -12.289 -26.904 -12.151 4.491 3.734 0.305 CL ZO7 33 ZO7 H1 H1 H 0 1 N N N -18.272 -26.820 -3.214 -4.872 2.082 -2.416 H1 ZO7 34 ZO7 H2 H2 H 0 1 N N N -17.749 -27.129 -4.905 -3.118 2.267 -2.180 H2 ZO7 35 ZO7 H3 H3 H 0 1 N N N -16.728 -27.680 -3.534 -3.809 0.656 -2.488 H3 ZO7 36 ZO7 H4 H4 H 0 1 N N N -17.070 -25.217 -1.813 -4.517 2.608 1.252 H4 ZO7 37 ZO7 H5 H5 H 0 1 N N N -15.501 -26.024 -2.150 -3.531 3.407 0.004 H5 ZO7 38 ZO7 H6 H6 H 0 1 N N N -15.694 -24.267 -2.472 -5.286 3.222 -0.231 H6 ZO7 39 ZO7 H7 H7 H 0 1 N N N -11.824 -25.674 -7.429 -0.330 3.441 0.654 H7 ZO7 40 ZO7 H8 H8 H 0 1 N N N -10.977 -26.102 -9.703 1.812 4.648 0.599 H8 ZO7 41 ZO7 H9 H9 H 0 1 N N N -19.360 -25.531 -3.671 -6.756 2.112 -0.342 H9 ZO7 42 ZO7 H10 H10 H 0 1 N N N -15.790 -26.599 -8.728 1.742 -0.266 0.165 H10 ZO7 43 ZO7 H11 H11 H 0 1 N N N -16.897 -26.404 -10.377 3.178 -0.987 -0.453 H11 ZO7 44 ZO7 H12 H12 H 0 1 N N N -18.265 -27.176 -12.228 5.069 -0.692 -2.008 H12 ZO7 45 ZO7 H13 H13 H 0 1 N N N -15.750 -28.453 -13.383 6.091 -2.963 -1.740 H13 ZO7 46 ZO7 H14 H14 H 0 1 N N N -16.824 -30.595 -12.905 6.417 -2.908 0.701 H14 ZO7 47 ZO7 H15 H15 H 0 1 N N N -16.616 -30.549 -10.435 3.369 -3.038 0.835 H15 ZO7 48 ZO7 H16 H16 H 0 1 N N N -15.314 -29.593 -11.219 4.482 -3.067 2.224 H16 ZO7 49 ZO7 H17 H17 H 0 1 N N N -20.923 -23.731 -4.314 -8.702 0.660 0.054 H17 ZO7 50 ZO7 H18 H18 H 0 1 N N N -20.055 -21.634 -5.295 -8.393 -1.760 0.366 H18 ZO7 51 ZO7 H19 H19 H 0 1 N N N -16.065 -23.147 -4.990 -4.162 -1.265 -0.128 H19 ZO7 52 ZO7 H20 H20 H 0 1 N N N -15.493 -21.533 -5.422 -5.364 -3.409 -1.617 H20 ZO7 53 ZO7 H21 H21 H 0 1 N N N -15.770 -19.881 -6.256 -5.460 -4.930 -0.533 H21 ZO7 54 ZO7 H22 H22 H 0 1 N N N -19.331 -20.441 -6.182 -7.436 -4.090 1.649 H22 ZO7 55 ZO7 H23 H23 H 0 1 N N N -18.165 -19.143 -5.753 -5.747 -4.630 1.810 H23 ZO7 56 ZO7 H24 H24 H 0 1 N N N -18.074 -19.938 -7.362 -6.240 -3.045 2.454 H24 ZO7 57 ZO7 H25 H25 H 0 1 N N N -14.774 -27.995 -11.544 5.007 1.268 0.048 H25 ZO7 58 ZO7 H26 H26 H 0 1 N N N -14.621 -25.348 -4.369 -3.012 -0.070 0.508 H26 ZO7 59 ZO7 H27 H27 H 0 1 N N N -13.512 -25.587 -6.012 -0.697 -0.063 0.828 H27 ZO7 60 ZO7 H28 H28 H 0 1 N N N -16.933 -25.280 -12.559 6.577 0.314 -0.450 H28 ZO7 61 ZO7 H29 H29 H 0 1 N N N -17.360 -29.253 -14.880 3.968 -4.060 -1.733 H29 ZO7 62 ZO7 H30 H30 H 0 1 N N N -18.756 -30.541 -11.586 5.499 -5.076 1.105 H30 ZO7 63 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZO7 O5 C26 SING N N 1 ZO7 C26 C25 SING N N 2 ZO7 C26 C27 SING N N 3 ZO7 O4 C25 SING N N 4 ZO7 C25 C24 SING N N 5 ZO7 C27 O6 SING N N 6 ZO7 C27 C29 SING N N 7 ZO7 CL C20 SING N N 8 ZO7 N1 C24 SING N N 9 ZO7 N1 C21 SING N N 10 ZO7 C29 O3 SING N N 11 ZO7 C24 O3 SING N N 12 ZO7 C20 C21 DOUB Y N 13 ZO7 C20 C19 SING Y N 14 ZO7 C21 C22 SING Y N 15 ZO7 C19 C18 DOUB Y N 16 ZO7 C22 C17 DOUB Y N 17 ZO7 C18 C17 SING Y N 18 ZO7 C17 N4 SING N N 19 ZO7 O2 C10 DOUB N N 20 ZO7 N4 C10 SING N N 21 ZO7 C9 C7 SING N N 22 ZO7 C10 N3 SING N N 23 ZO7 C8 C7 DOUB N N 24 ZO7 C7 C5 SING N N 25 ZO7 C5 C4 DOUB Y N 26 ZO7 C5 C6 SING Y N 27 ZO7 C4 C3 SING Y N 28 ZO7 C6 C1 DOUB Y N 29 ZO7 N3 C11 SING N N 30 ZO7 C3 C2 DOUB Y N 31 ZO7 C1 C2 SING Y N 32 ZO7 C1 C11 SING N N 33 ZO7 C11 C12 SING N N 34 ZO7 C11 C13 SING N N 35 ZO7 C12 H1 SING N N 36 ZO7 C12 H2 SING N N 37 ZO7 C12 H3 SING N N 38 ZO7 C13 H4 SING N N 39 ZO7 C13 H5 SING N N 40 ZO7 C13 H6 SING N N 41 ZO7 C18 H7 SING N N 42 ZO7 C19 H8 SING N N 43 ZO7 C2 H9 SING N N 44 ZO7 C22 H10 SING N N 45 ZO7 C24 H11 SING N N 46 ZO7 C25 H12 SING N N 47 ZO7 C26 H13 SING N N 48 ZO7 C27 H14 SING N N 49 ZO7 C29 H15 SING N N 50 ZO7 C29 H16 SING N N 51 ZO7 C3 H17 SING N N 52 ZO7 C4 H18 SING N N 53 ZO7 C6 H19 SING N N 54 ZO7 C8 H20 SING N N 55 ZO7 C8 H21 SING N N 56 ZO7 C9 H22 SING N N 57 ZO7 C9 H23 SING N N 58 ZO7 C9 H24 SING N N 59 ZO7 N1 H25 SING N N 60 ZO7 N3 H26 SING N N 61 ZO7 N4 H27 SING N N 62 ZO7 O4 H28 SING N N 63 ZO7 O5 H29 SING N N 64 ZO7 O6 H30 SING N N 65 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZO7 SMILES ACDLabs 12.01 "C=C(C)c1cccc(c1)C(C)(C)NC(=O)Nc1cc(NC2OCC(O)C(O)C2O)c(Cl)cc1" ZO7 InChI InChI 1.03 "InChI=1S/C24H30ClN3O5/c1-13(2)14-6-5-7-15(10-14)24(3,4)28-23(32)26-16-8-9-17(25)18(11-16)27-22-21(31)20(30)19(29)12-33-22/h5-11,19-22,27,29-31H,1,12H2,2-4H3,(H2,26,28,32)/t19-,20-,21+,22-/m1/s1" ZO7 InChIKey InChI 1.03 AFRUCARRYXUVSH-YUMYIRISSA-N ZO7 SMILES_CANONICAL CACTVS 3.385 "CC(=C)c1cccc(c1)C(C)(C)NC(=O)Nc2ccc(Cl)c(N[C@@H]3OC[C@@H](O)[C@@H](O)[C@@H]3O)c2" ZO7 SMILES CACTVS 3.385 "CC(=C)c1cccc(c1)C(C)(C)NC(=O)Nc2ccc(Cl)c(N[CH]3OC[CH](O)[CH](O)[CH]3O)c2" ZO7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=C)c1cccc(c1)C(C)(C)NC(=O)Nc2ccc(c(c2)N[C@H]3[C@H]([C@@H]([C@@H](CO3)O)O)O)Cl" ZO7 SMILES "OpenEye OEToolkits" 2.0.7 "CC(=C)c1cccc(c1)C(C)(C)NC(=O)Nc2ccc(c(c2)NC3C(C(C(CO3)O)O)O)Cl" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZO7 "SYSTEMATIC NAME" ACDLabs 12.01 "N-{2-chloro-5-[({2-[3-(prop-1-en-2-yl)phenyl]propan-2-yl}carbamoyl)amino]phenyl}-beta-D-arabinopyranosylamine" ZO7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[4-chloranyl-3-[[(2~{R},3~{S},4~{R},5~{R})-3,4,5-tris(oxidanyl)oxan-2-yl]amino]phenyl]-3-[2-(3-prop-1-en-2-ylphenyl)propan-2-yl]urea" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZO7 "Create component" 2021-05-14 RCSB ZO7 "Initial release" 2021-06-09 RCSB ##