data_ZOE # _chem_comp.id ZOE _chem_comp.name "6-({5-[(3aS,4S,5S,6aR)-5-oxido-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)hexanoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H27 N3 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-10-16 _chem_comp.pdbx_modified_date 2015-02-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 373.468 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZOE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3WZO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZOE OAD OAD O 0 1 N N N -1.252 -5.319 -18.844 4.333 -2.771 0.564 OAD ZOE 1 ZOE SAY SAY S 0 1 N N S -0.992 -6.769 -18.814 4.940 -1.489 0.641 SAY ZOE 2 ZOE CAO CAO C 0 1 N N N -2.202 -7.382 -17.759 6.747 -1.647 0.336 CAO ZOE 3 ZOE CAV CAV C 0 1 N N R -2.446 -8.814 -18.223 7.089 -0.320 -0.369 CAV ZOE 4 ZOE NAQ NAQ N 0 1 N N N -1.521 -9.761 -17.621 7.463 0.682 0.641 NAQ ZOE 5 ZOE CAU CAU C 0 1 N N N -0.730 -10.345 -18.554 6.621 1.721 0.559 CAU ZOE 6 ZOE OAC OAC O 0 1 N N N 0.138 -11.167 -18.314 6.699 2.697 1.280 OAC ZOE 7 ZOE NAR NAR N 0 1 N N N -1.033 -9.894 -19.784 5.685 1.587 -0.390 NAR ZOE 8 ZOE CAX CAX C 0 1 N N S -2.113 -8.909 -19.717 5.875 0.298 -1.073 CAX ZOE 9 ZOE CAW CAW C 0 1 N N S -1.694 -7.537 -20.195 4.603 -0.557 -0.908 CAW ZOE 10 ZOE CAN CAN C 0 1 N N N -0.775 -7.539 -21.392 3.369 0.333 -0.747 CAN ZOE 11 ZOE CAJ CAJ C 0 1 N N N -0.607 -6.157 -22.029 2.112 -0.539 -0.710 CAJ ZOE 12 ZOE CAI CAI C 0 1 N N N 0.351 -6.240 -23.248 0.878 0.351 -0.550 CAI ZOE 13 ZOE CAM CAM C 0 1 N N N 0.685 -4.872 -23.866 -0.379 -0.521 -0.513 CAM ZOE 14 ZOE CAT CAT C 0 1 N N N -0.509 -4.259 -24.561 -1.594 0.355 -0.355 CAT ZOE 15 ZOE OAB OAB O 0 1 N N N -1.340 -4.948 -25.197 -1.468 1.559 -0.279 OAB ZOE 16 ZOE NAP NAP N 0 1 N N N -0.576 -2.930 -24.483 -2.821 -0.198 -0.298 NAP ZOE 17 ZOE CAK CAK C 0 1 N N N -1.569 -2.164 -25.273 -4.003 0.654 -0.144 CAK ZOE 18 ZOE CAG CAG C 0 1 N N N -2.965 -2.070 -24.683 -5.260 -0.218 -0.107 CAG ZOE 19 ZOE CAF CAF C 0 1 N N N -4.029 -1.620 -25.704 -6.494 0.672 0.053 CAF ZOE 20 ZOE CAH CAH C 0 1 N N N -5.175 -2.646 -25.855 -7.750 -0.201 0.090 CAH ZOE 21 ZOE CAL CAL C 0 1 N N N -5.540 -2.930 -27.323 -8.984 0.689 0.251 CAL ZOE 22 ZOE CAS CAS C 0 1 N N N -4.733 -4.079 -27.940 -10.222 -0.170 0.287 CAS ZOE 23 ZOE OAA OAA O 0 1 N N N -4.830 -5.220 -27.456 -11.430 0.399 0.422 OAA ZOE 24 ZOE OAE OAE O 0 1 N N N -3.995 -3.893 -28.944 -10.127 -1.371 0.194 OAE ZOE 25 ZOE H2 H2 H 0 1 N N N -1.849 -7.369 -16.717 7.291 -1.738 1.275 H2 ZOE 26 ZOE H3 H3 H 0 1 N N N -3.124 -6.787 -17.841 6.956 -2.498 -0.314 H3 ZOE 27 ZOE H4 H4 H 0 1 N N N -3.492 -9.103 -18.045 7.906 -0.467 -1.075 H4 ZOE 28 ZOE H5 H5 H 0 1 N N N -1.474 -9.957 -16.641 8.200 0.603 1.267 H5 ZOE 29 ZOE H6 H6 H 0 1 N N N -0.583 -10.190 -20.627 4.992 2.235 -0.594 H6 ZOE 30 ZOE H7 H7 H 0 1 N N N -2.995 -9.254 -20.277 6.092 0.458 -2.129 H7 ZOE 31 ZOE H8 H8 H 0 1 N N N -2.597 -6.959 -20.443 4.482 -1.238 -1.750 H8 ZOE 32 ZOE H9 H9 H 0 1 N N N -1.187 -8.224 -22.148 3.446 0.898 0.182 H9 ZOE 33 ZOE H10 H10 H 0 1 N N N 0.214 -7.899 -21.072 3.307 1.024 -1.588 H10 ZOE 34 ZOE H11 H11 H 0 1 N N N -0.189 -5.463 -21.285 2.034 -1.104 -1.639 H11 ZOE 35 ZOE H12 H12 H 0 1 N N N -1.588 -5.789 -22.363 2.174 -1.230 0.131 H12 ZOE 36 ZOE H13 H13 H 0 1 N N N -0.123 -6.864 -24.020 0.956 0.916 0.379 H13 ZOE 37 ZOE H14 H14 H 0 1 N N N 1.289 -6.712 -22.921 0.816 1.042 -1.391 H14 ZOE 38 ZOE H15 H15 H 0 1 N N N 1.495 -5.001 -24.599 -0.456 -1.086 -1.442 H15 ZOE 39 ZOE H16 H16 H 0 1 N N N 1.018 -4.193 -23.067 -0.317 -1.212 0.328 H16 ZOE 40 ZOE H17 H17 H 0 1 N N N 0.055 -2.441 -23.881 -2.922 -1.161 -0.358 H17 ZOE 41 ZOE H18 H18 H 0 1 N N N -1.653 -2.642 -26.260 -3.925 1.218 0.785 H18 ZOE 42 ZOE H19 H19 H 0 1 N N N -1.185 -1.140 -25.393 -4.065 1.345 -0.985 H19 ZOE 43 ZOE H20 H20 H 0 1 N N N -2.946 -1.345 -23.856 -5.337 -0.783 -1.036 H20 ZOE 44 ZOE H21 H21 H 0 1 N N N -3.248 -3.060 -24.297 -5.198 -0.909 0.734 H21 ZOE 45 ZOE H22 H22 H 0 1 N N N -3.545 -1.486 -26.682 -6.416 1.236 0.982 H22 ZOE 46 ZOE H23 H23 H 0 1 N N N -4.455 -0.662 -25.371 -6.555 1.362 -0.788 H23 ZOE 47 ZOE H24 H24 H 0 1 N N N -6.066 -2.254 -25.342 -7.828 -0.765 -0.839 H24 ZOE 48 ZOE H25 H25 H 0 1 N N N -4.865 -3.590 -25.382 -7.688 -0.891 0.931 H25 ZOE 49 ZOE H26 H26 H 0 1 N N N -5.355 -2.019 -27.911 -8.907 1.254 1.180 H26 ZOE 50 ZOE H27 H27 H 0 1 N N N -6.608 -3.188 -27.373 -9.046 1.380 -0.590 H27 ZOE 51 ZOE H28 H28 H 0 1 N N N -4.292 -5.823 -27.955 -12.195 -0.193 0.440 H28 ZOE 52 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZOE OAE CAS DOUB N N 1 ZOE CAS OAA SING N N 2 ZOE CAS CAL SING N N 3 ZOE CAL CAH SING N N 4 ZOE CAH CAF SING N N 5 ZOE CAF CAG SING N N 6 ZOE CAK CAG SING N N 7 ZOE CAK NAP SING N N 8 ZOE OAB CAT DOUB N N 9 ZOE CAT NAP SING N N 10 ZOE CAT CAM SING N N 11 ZOE CAM CAI SING N N 12 ZOE CAI CAJ SING N N 13 ZOE CAJ CAN SING N N 14 ZOE CAN CAW SING N N 15 ZOE CAW CAX SING N N 16 ZOE CAW SAY SING N N 17 ZOE NAR CAX SING N N 18 ZOE NAR CAU SING N N 19 ZOE CAX CAV SING N N 20 ZOE OAD SAY DOUB N N 21 ZOE SAY CAO SING N N 22 ZOE CAU OAC DOUB N N 23 ZOE CAU NAQ SING N N 24 ZOE CAV CAO SING N N 25 ZOE CAV NAQ SING N N 26 ZOE CAO H2 SING N N 27 ZOE CAO H3 SING N N 28 ZOE CAV H4 SING N N 29 ZOE NAQ H5 SING N N 30 ZOE NAR H6 SING N N 31 ZOE CAX H7 SING N N 32 ZOE CAW H8 SING N N 33 ZOE CAN H9 SING N N 34 ZOE CAN H10 SING N N 35 ZOE CAJ H11 SING N N 36 ZOE CAJ H12 SING N N 37 ZOE CAI H13 SING N N 38 ZOE CAI H14 SING N N 39 ZOE CAM H15 SING N N 40 ZOE CAM H16 SING N N 41 ZOE NAP H17 SING N N 42 ZOE CAK H18 SING N N 43 ZOE CAK H19 SING N N 44 ZOE CAG H20 SING N N 45 ZOE CAG H21 SING N N 46 ZOE CAF H22 SING N N 47 ZOE CAF H23 SING N N 48 ZOE CAH H24 SING N N 49 ZOE CAH H25 SING N N 50 ZOE CAL H26 SING N N 51 ZOE CAL H27 SING N N 52 ZOE OAA H28 SING N N 53 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZOE SMILES ACDLabs 12.01 "O=S2C(C1NC(=O)NC1C2)CCCCC(=O)NCCCCCC(=O)O" ZOE InChI InChI 1.03 "InChI=1S/C16H27N3O5S/c20-13(17-9-5-1-2-8-14(21)22)7-4-3-6-12-15-11(10-25(12)24)18-16(23)19-15/h11-12,15H,1-10H2,(H,17,20)(H,21,22)(H2,18,19,23)/t11-,12-,15-,25-/m0/s1" ZOE InChIKey InChI 1.03 WVGTVVXHODUEJR-XNCOPMLMSA-N ZOE SMILES_CANONICAL CACTVS 3.385 "OC(=O)CCCCCNC(=O)CCCC[C@H]1[C@H]2NC(=O)N[C@H]2C[S@]1=O" ZOE SMILES CACTVS 3.385 "OC(=O)CCCCCNC(=O)CCCC[CH]1[CH]2NC(=O)N[CH]2C[S]1=O" ZOE SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C1[C@H]2[C@@H]([C@@H]([S@]1=O)CCCCC(=O)NCCCCCC(=O)O)NC(=O)N2" ZOE SMILES "OpenEye OEToolkits" 1.7.6 "C1C2C(C(S1=O)CCCCC(=O)NCCCCCC(=O)O)NC(=O)N2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZOE "SYSTEMATIC NAME" ACDLabs 12.01 "6-({5-[(3aS,4S,5S,6aR)-5-oxido-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)hexanoic acid" ZOE "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "6-[5-[(3aS,4S,5S,6aR)-2,5-bis(oxidanylidene)-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]hexanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZOE "Create component" 2014-10-16 PDBJ ZOE "Initial release" 2015-02-18 RCSB #