data_ZP2 # _chem_comp.id ZP2 _chem_comp.name "(3-fluoranyl-5-oxidanyl-phenyl)-(3-methoxy-5-nitro-4-oxidanyl-phenyl)methanone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H10 F N O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "Pharmacokinetically Improved TTR Binder (PITB)" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-29 _chem_comp.pdbx_modified_date 2024-05-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 307.231 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZP2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PM9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZP2 O22 O1 O 0 1 N N N N N N 2.773 27.552 1.951 -4.326 2.349 -0.420 O22 ZP2 1 ZP2 O17 O2 O 0 1 N N N N N N 0.539 30.382 0.285 -3.942 -1.598 0.263 O17 ZP2 2 ZP2 C11 C1 C 0 1 Y N N N N N -0.468 26.370 -0.281 -0.514 0.694 0.001 C11 ZP2 3 ZP2 C02 C2 C 0 1 Y N N N N N 0.193 21.396 0.375 4.368 0.879 0.487 C02 ZP2 4 ZP2 C03 C3 C 0 1 Y N N N N N 0.287 21.468 1.748 4.526 -0.354 -0.129 C03 ZP2 5 ZP2 C04 C4 C 0 1 Y N N N N N 0.002 22.650 2.402 3.445 -0.978 -0.729 C04 ZP2 6 ZP2 C06 C5 C 0 1 Y N N N N N -0.380 23.782 1.696 2.202 -0.375 -0.718 C06 ZP2 7 ZP2 C07 C6 C 0 1 Y N N N N N -0.468 23.718 0.313 2.035 0.867 -0.101 C07 ZP2 8 ZP2 C08 C7 C 0 1 Y N N N N N -0.188 22.520 -0.339 3.127 1.493 0.503 C08 ZP2 9 ZP2 C09 C8 C 0 1 N N N N N N -0.895 24.922 -0.529 0.707 1.516 -0.087 C09 ZP2 10 ZP2 C12 C9 C 0 1 Y N N N N N -1.269 27.381 -0.786 -0.418 -0.682 0.238 C12 ZP2 11 ZP2 C13 C10 C 0 1 Y N N N N N -0.946 28.711 -0.597 -1.565 -1.445 0.325 C13 ZP2 12 ZP2 C15 C11 C 0 1 N N N N N N -2.887 29.300 -1.828 -0.163 -3.330 0.697 C15 ZP2 13 ZP2 C16 C12 C 0 1 Y N N N N N 0.205 29.036 0.095 -2.816 -0.845 0.177 C16 ZP2 14 ZP2 C18 C13 C 0 1 Y N N N N N 1.017 28.034 0.595 -2.911 0.520 -0.058 C18 ZP2 15 ZP2 C19 C14 C 0 1 Y N N N N N 0.686 26.698 0.408 -1.771 1.288 -0.146 C19 ZP2 16 ZP2 F05 F1 F 0 1 N N N N N N 0.105 22.668 3.757 3.606 -2.179 -1.326 F05 ZP2 17 ZP2 N20 N1 N 1 1 N N N N N N 2.225 28.375 1.322 -4.241 1.151 -0.214 N20 ZP2 18 ZP2 O01 O3 O 0 1 N N N N N N 0.485 20.179 -0.262 5.432 1.484 1.079 O01 ZP2 19 ZP2 O10 O4 O 0 1 N N N N N N -1.619 24.716 -1.437 0.622 2.727 -0.148 O10 ZP2 20 ZP2 O14 O5 O 0 1 N N N N N N -1.767 29.730 -1.103 -1.475 -2.783 0.555 O14 ZP2 21 ZP2 O21 O6 O -1 1 N N N N N N 2.739 29.681 1.283 -5.249 0.473 -0.136 O21 ZP2 22 ZP2 H1 H1 H 0 1 N N N N N N 1.399 30.442 0.684 -4.301 -1.669 1.158 H1 ZP2 23 ZP2 H2 H2 H 0 1 N N N N N N 0.584 20.598 2.314 5.496 -0.830 -0.140 H2 ZP2 24 ZP2 H3 H3 H 0 1 N N N N N N -0.606 24.701 2.217 1.360 -0.863 -1.188 H3 ZP2 25 ZP2 H4 H4 H 0 1 N N N N N N -0.269 22.467 -1.415 3.003 2.453 0.983 H4 ZP2 26 ZP2 H5 H5 H 0 1 N N N N N N -2.162 27.125 -1.337 0.551 -1.145 0.352 H5 ZP2 27 ZP2 H6 H6 H 0 1 N N N N N N -3.457 30.174 -2.176 0.405 -3.151 -0.216 H6 ZP2 28 ZP2 H7 H7 H 0 1 N N N N N N -2.557 28.708 -2.695 0.341 -2.854 1.538 H7 ZP2 29 ZP2 H8 H8 H 0 1 N N N N N N -3.526 28.680 -1.182 -0.234 -4.403 0.876 H8 ZP2 30 ZP2 H9 H9 H 0 1 N N N N N N 1.326 25.920 0.798 -1.848 2.351 -0.324 H9 ZP2 31 ZP2 H10 H10 H 0 1 N N N N N N 0.725 19.530 0.389 5.933 2.063 0.489 H10 ZP2 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZP2 C15 O14 SING N N 1 ZP2 O10 C09 DOUB N N 2 ZP2 O14 C13 SING N N 3 ZP2 C12 C13 DOUB Y N 4 ZP2 C12 C11 SING Y N 5 ZP2 C13 C16 SING Y N 6 ZP2 C09 C11 SING N N 7 ZP2 C09 C07 SING N N 8 ZP2 C08 C07 DOUB Y N 9 ZP2 C08 C02 SING Y N 10 ZP2 C11 C19 DOUB Y N 11 ZP2 O01 C02 SING N N 12 ZP2 C16 O17 SING N N 13 ZP2 C16 C18 DOUB Y N 14 ZP2 C07 C06 SING Y N 15 ZP2 C02 C03 DOUB Y N 16 ZP2 C19 C18 SING Y N 17 ZP2 C18 N20 SING N N 18 ZP2 O21 N20 SING N N 19 ZP2 N20 O22 DOUB N N 20 ZP2 C06 C04 DOUB Y N 21 ZP2 C03 C04 SING Y N 22 ZP2 C04 F05 SING N N 23 ZP2 O17 H1 SING N N 24 ZP2 C03 H2 SING N N 25 ZP2 C06 H3 SING N N 26 ZP2 C08 H4 SING N N 27 ZP2 C12 H5 SING N N 28 ZP2 C15 H6 SING N N 29 ZP2 C15 H7 SING N N 30 ZP2 C15 H8 SING N N 31 ZP2 C19 H9 SING N N 32 ZP2 O01 H10 SING N N 33 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZP2 InChI InChI 1.06 "InChI=1S/C14H10FNO6/c1-22-12-5-8(4-11(14(12)19)16(20)21)13(18)7-2-9(15)6-10(17)3-7/h2-6,17,19H,1H3" ZP2 InChIKey InChI 1.06 LHCGDAFIWWCKGM-UHFFFAOYSA-N ZP2 SMILES_CANONICAL CACTVS 3.385 "COc1cc(cc(c1O)[N+]([O-])=O)C(=O)c2cc(O)cc(F)c2" ZP2 SMILES CACTVS 3.385 "COc1cc(cc(c1O)[N+]([O-])=O)C(=O)c2cc(O)cc(F)c2" ZP2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1cc(cc(c1O)[N+](=O)[O-])C(=O)c2cc(cc(c2)F)O" ZP2 SMILES "OpenEye OEToolkits" 2.0.7 "COc1cc(cc(c1O)[N+](=O)[O-])C(=O)c2cc(cc(c2)F)O" # _pdbx_chem_comp_identifier.comp_id ZP2 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3-fluoranyl-5-oxidanyl-phenyl)-(3-methoxy-5-nitro-4-oxidanyl-phenyl)methanone" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id ZP2 _pdbx_chem_comp_synonyms.name "Pharmacokinetically Improved TTR Binder (PITB)" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZP2 "Create component" 2023-06-29 PDBE ZP2 "Initial release" 2024-05-08 RCSB #